RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 STAC3Q96MF2 364 aa20.27■□□□□ 0.84
PDZD8-201ENST00000334464 DDX49Q9Y6V7 483 aaKnown RBP20.26■□□□□ 0.83
PDZD8-201ENST00000334464 USP47Q96K76 1375 aa20.26■□□□□ 0.83
PDZD8-201ENST00000334464 ACBD3Q9H3P7 528 aa20.26■□□□□ 0.83
PDZD8-201ENST00000334464 VPS37DQ86XT2 251 aa20.26■□□□□ 0.83
PDZD8-201ENST00000334464 HSP90AB4PQ58FF6 505 aa20.25■□□□□ 0.83
PDZD8-201ENST00000334464 RILPL2Q969X0 211 aa20.25■□□□□ 0.83
PDZD8-201ENST00000334464 MCTP1Q6DN14 999 aa20.25■□□□□ 0.83
PDZD8-201ENST00000334464 CCDC43Q96MW1 224 aaKnown RBP20.25■□□□□ 0.83
PDZD8-201ENST00000334464 FHOD3Q2V2M9 1422 aa20.24■□□□□ 0.83
PDZD8-201ENST00000334464 NOL8Q76FK4 1167 aaKnown RBP20.24■□□□□ 0.83
PDZD8-201ENST00000334464 CLUAP1Q96AJ1 413 aa20.23■□□□□ 0.83
PDZD8-201ENST00000334464 ERICH2A1L162 156 aa20.23■□□□□ 0.83
PDZD8-201ENST00000334464 PDE4CQ08493 712 aa20.23■□□□□ 0.83
PDZD8-201ENST00000334464 L3MBTL2Q969R5 705 aa20.23■□□□□ 0.83
PDZD8-201ENST00000334464 NAT10Q9H0A0 1025 aaKnown RBP20.23■□□□□ 0.83
PDZD8-201ENST00000334464 SAFBQ15424 915 aaKnown RBP eCLIP20.22■□□□□ 0.83
PDZD8-201ENST00000334464 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
PDZD8-201ENST00000334464 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
PDZD8-201ENST00000334464 ERC2O15083 957 aa20.22■□□□□ 0.83
PDZD8-201ENST00000334464 CCAR2Q8N163 923 aaKnown RBP20.22■□□□□ 0.83
PDZD8-201ENST00000334464 AK7Q96M32 723 aa20.22■□□□□ 0.83
PDZD8-201ENST00000334464 API5Q9BZZ5 524 aaKnown RBP20.22■□□□□ 0.83
PDZD8-201ENST00000334464 EVA1CP58658 441 aa20.22■□□□□ 0.83
PDZD8-201ENST00000334464 SCAPERQ9BY12 1400 aa20.21■□□□□ 0.83
PDZD8-201ENST00000334464 IFIT2P09913 472 aaKnown RBP20.21■□□□□ 0.83
PDZD8-201ENST00000334464 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
PDZD8-201ENST00000334464 MYO6Q9UM54 1294 aa20.21■□□□□ 0.83
PDZD8-201ENST00000334464 BRMS1Q9HCU9 246 aa20.19■□□□□ 0.82
PDZD8-201ENST00000334464 RRP12Q5JTH9 1297 aaKnown RBP20.19■□□□□ 0.82
PDZD8-201ENST00000334464 ARGLU1Q9NWB6 273 aaPredicted RBP20.19■□□□□ 0.82
PDZD8-201ENST00000334464 PCMTD1Q96MG8 357 aaPredicted RBP20.18■□□□□ 0.82
PDZD8-201ENST00000334464 RUFY1Q96T51 708 aa20.18■□□□□ 0.82
PDZD8-201ENST00000334464 LTV1Q96GA3 475 aaPredicted RBP20.18■□□□□ 0.82
PDZD8-201ENST00000334464 KRI1Q8N9T8 703 aaKnown RBP20.18■□□□□ 0.82
PDZD8-201ENST00000334464 NUCB2P80303 420 aa20.17■□□□□ 0.82
PDZD8-201ENST00000334464 KANK4Q5T7N3 995 aaPredicted RBP20.17■□□□□ 0.82
PDZD8-201ENST00000334464 MYOM3Q5VTT5 1437 aa20.17■□□□□ 0.82
PDZD8-201ENST00000334464 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
PDZD8-201ENST00000334464 NOM1Q5C9Z4 860 aaKnown RBP20.17■□□□□ 0.82
PDZD8-201ENST00000334464 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.17■□□□□ 0.82
PDZD8-201ENST00000334464 G3BP1Q13283 466 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDZD8-201ENST00000334464 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDZD8-201ENST00000334464 RRP1P56182 461 aaKnown RBP20.16■□□□□ 0.82
PDZD8-201ENST00000334464 CCDC173Q0VFZ6 552 aa20.15■□□□□ 0.82
PDZD8-201ENST00000334464 XBP1P17861 261 aa20.15■□□□□ 0.82
PDZD8-201ENST00000334464 HNRNPMP52272 730 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDZD8-201ENST00000334464 INTS3Q68E01 1043 aaKnown RBP20.15■□□□□ 0.82
PDZD8-201ENST00000334464 CADPSQ9ULU8 1353 aa20.15■□□□□ 0.82
PDZD8-201ENST00000334464 RRBP1Q9P2E9 1410 aaKnown RBP20.15■□□□□ 0.82
PDZD8-201ENST00000334464 APPP05067 770 aa20.15■□□□□ 0.82
PDZD8-201ENST00000334464 KIF7Q2M1P5 1343 aa20.15■□□□□ 0.82
PDZD8-201ENST00000334464 DHX8Q14562 1220 aaKnown RBP20.14■□□□□ 0.82
PDZD8-201ENST00000334464 ANO2Q9NQ90 1003 aa20.14■□□□□ 0.81
PDZD8-201ENST00000334464 PANK3Q9H999 370 aa20.14■□□□□ 0.81
PDZD8-201ENST00000334464 CCDC73Q6ZRK6 1079 aa20.14■□□□□ 0.81
PDZD8-201ENST00000334464 VSIG10Q8N0Z9 540 aa20.14■□□□□ 0.81
PDZD8-201ENST00000334464 GSE1Q14687 1217 aa20.13■□□□□ 0.81
PDZD8-201ENST00000334464 ODF2Q5BJF6 829 aa20.13■□□□□ 0.81
PDZD8-201ENST00000334464 HOMER1Q86YM7 354 aa20.13■□□□□ 0.81
PDZD8-201ENST00000334464 CT47A1Q5JQC4 288 aaPredicted RBP20.13■□□□□ 0.81
PDZD8-201ENST00000334464 CNKSR2Q8WXI2 1034 aa20.13■□□□□ 0.81
PDZD8-201ENST00000334464 KIF21BO75037 1637 aa20.13■□□□□ 0.81
PDZD8-201ENST00000334464 DCTN1Q14203 1278 aa20.13■□□□□ 0.81
PDZD8-201ENST00000334464 MTERF4Q7Z6M4 381 aaKnown RBP20.13■□□□□ 0.81
PDZD8-201ENST00000334464 FOXD4L1Q9NU39 408 aa20.12■□□□□ 0.81
PDZD8-201ENST00000334464 BICD2Q8TD16 824 aa20.12■□□□□ 0.81
PDZD8-201ENST00000334464 NFXL1Q6ZNB6 911 aa20.12■□□□□ 0.81
PDZD8-201ENST00000334464 EPS15P42566 896 aa20.12■□□□□ 0.81
PDZD8-201ENST00000334464 TRAK1Q9UPV9 953 aa20.11■□□□□ 0.81
PDZD8-201ENST00000334464 HSP90B2PQ58FF3 399 aa20.11■□□□□ 0.81
PDZD8-201ENST00000334464 SASS6Q6UVJ0 657 aa20.11■□□□□ 0.81
PDZD8-201ENST00000334464 RALYLQ86SE5 291 aaKnown RBP20.11■□□□□ 0.81
PDZD8-201ENST00000334464 CCP110O43303 1012 aa20.1■□□□□ 0.81
PDZD8-201ENST00000334464 ST20-MTHFSA0A0A6YYL1 179 aa20.1■□□□□ 0.81
PDZD8-201ENST00000334464 DZIP1LQ8IYY4 767 aaKnown RBP20.1■□□□□ 0.81
PDZD8-201ENST00000334464 DHX16O60231 1041 aaKnown RBP20.09■□□□□ 0.81
PDZD8-201ENST00000334464 R3HCC1Q9Y3T6 440 aaKnown RBP20.09■□□□□ 0.81
PDZD8-201ENST00000334464 DIAPH1O60610 1272 aaKnown RBP20.09■□□□□ 0.81
PDZD8-201ENST00000334464 PSMA5P28066 241 aa20.09■□□□□ 0.81
PDZD8-201ENST00000334464 GNAI1P63096 354 aa20.09■□□□□ 0.81
PDZD8-201ENST00000334464 PDE4AP27815 886 aa20.09■□□□□ 0.81
PDZD8-201ENST00000334464 PDCP20941 246 aa20.08■□□□□ 0.8
PDZD8-201ENST00000334464 FOXD4L5Q5VV16 416 aaPredicted RBP20.08■□□□□ 0.8
PDZD8-201ENST00000334464 FOXD4L4Q8WXT5 416 aaPredicted RBP20.08■□□□□ 0.8
PDZD8-201ENST00000334464 FYCO1Q9BQS8 1478 aa20.08■□□□□ 0.8
PDZD8-201ENST00000334464 SART3Q15020 963 aaKnown RBP20.08■□□□□ 0.8
PDZD8-201ENST00000334464 OLFM4Q6UX06 510 aa20.08■□□□□ 0.8
PDZD8-201ENST00000334464 LETM1O95202 739 aaPredicted RBP20.07■□□□□ 0.8
PDZD8-201ENST00000334464 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.07■□□□□ 0.8
PDZD8-201ENST00000334464 SUPT6HQ7KZ85 1726 aaKnown RBP20.07■□□□□ 0.8
PDZD8-201ENST00000334464 SMC3Q9UQE7 1217 aa20.07■□□□□ 0.8
PDZD8-201ENST00000334464 CWC22Q9HCG8 908 aaKnown RBP20.07■□□□□ 0.8
PDZD8-201ENST00000334464 PTPRGP23470 1445 aa20.07■□□□□ 0.8
PDZD8-201ENST00000334464 CALRP27797 417 aaKnown RBP20.07■□□□□ 0.8
PDZD8-201ENST00000334464 CHMP5Q9NZZ3 219 aa20.06■□□□□ 0.8
PDZD8-201ENST00000334464 HIP1O00291 1037 aa20.06■□□□□ 0.8
PDZD8-201ENST00000334464 SMG6Q86US8 1419 aaKnown RBP20.06■□□□□ 0.8
PDZD8-201ENST00000334464 ZNF771Q7L3S4 317 aaPredicted RBP20.06■□□□□ 0.8
PDZD8-201ENST00000334464 PSME1Q06323 249 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms