RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
PDCD1-201ENST00000334409 MADDQ8WXG6 1647 aa23.25■■□□□ 1.31
PDCD1-201ENST00000334409 PIK3C2BO00750 1634 aa23.25■■□□□ 1.31
PDCD1-201ENST00000334409 ANP32CO43423 234 aa23.24■■□□□ 1.31
PDCD1-201ENST00000334409 STAG3Q9UJ98 1225 aa23.24■■□□□ 1.31
PDCD1-201ENST00000334409 SPATA31D1Q6ZQQ2 1576 aa23.24■■□□□ 1.31
PDCD1-201ENST00000334409 ADGRB3O60242 1522 aa23.22■■□□□ 1.31
PDCD1-201ENST00000334409 C3P01024 1663 aa23.21■■□□□ 1.31
PDCD1-201ENST00000334409 RIMS1Q86UR5 1692 aaKnown RBP23.21■■□□□ 1.31
PDCD1-201ENST00000334409 ERICH6BQ5W0A0 696 aa23.21■■□□□ 1.31
PDCD1-201ENST00000334409 TNRQ92752 1358 aa23.21■■□□□ 1.31
PDCD1-201ENST00000334409 MYO5BQ9ULV0 1848 aa23.2■■□□□ 1.3
PDCD1-201ENST00000334409 PRAG1Q86YV5 1406 aa23.19■■□□□ 1.3
PDCD1-201ENST00000334409 ADGRF5Q8IZF2 1346 aa23.19■■□□□ 1.3
PDCD1-201ENST00000334409 UHRF1BP1Q6BDS2 1440 aa23.19■■□□□ 1.3
PDCD1-201ENST00000334409 NBPF1Q3BBV0 1214 aa23.18■■□□□ 1.3
PDCD1-201ENST00000334409 ADAMTSL3P82987 1691 aa23.17■■□□□ 1.3
PDCD1-201ENST00000334409 DEKP35659 375 aaKnown RBP23.17■■□□□ 1.3
PDCD1-201ENST00000334409 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
PDCD1-201ENST00000334409 NEURL4Q96JN8 1562 aa23.13■■□□□ 1.29
PDCD1-201ENST00000334409 CARD11Q9BXL7 1154 aa23.12■■□□□ 1.29
PDCD1-201ENST00000334409 ROCK2O75116 1388 aaKnown RBP23.12■■□□□ 1.29
PDCD1-201ENST00000334409 HSPA5P11021 654 aaKnown RBP23.11■■□□□ 1.29
PDCD1-201ENST00000334409 IFT172Q9UG01 1749 aa23.1■■□□□ 1.29
PDCD1-201ENST00000334409 CFAP70Q5T0N1 1121 aa23.1■■□□□ 1.29
PDCD1-201ENST00000334409 PPLO60437 1756 aa23.1■■□□□ 1.29
PDCD1-201ENST00000334409 A2ML1A8K2U0 1454 aa23.1■■□□□ 1.29
PDCD1-201ENST00000334409 RALGAPBQ86X10 1494 aa23.1■■□□□ 1.29
PDCD1-201ENST00000334409 RPGRIP1LQ68CZ1 1315 aa23.09■■□□□ 1.29
PDCD1-201ENST00000334409 NEXMIFQ5QGS0 1516 aa23.09■■□□□ 1.29
PDCD1-201ENST00000334409 EIF4G2P78344 907 aaKnown RBP eCLIP23.08■■□□□ 1.29
PDCD1-201ENST00000334409 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.29
PDCD1-201ENST00000334409 VGFO15240 615 aaPredicted RBP23.06■■□□□ 1.28
PDCD1-201ENST00000334409 MYOM2P54296 1465 aa23.05■■□□□ 1.28
PDCD1-201ENST00000334409 STAC3Q96MF2 364 aa23.05■■□□□ 1.28
PDCD1-201ENST00000334409 PTPRMP28827 1452 aa23.03■■□□□ 1.28
PDCD1-201ENST00000334409 USP47Q96K76 1375 aa23.03■■□□□ 1.28
PDCD1-201ENST00000334409 RIMS2Q9UQ26 1411 aa23.02■■□□□ 1.28
PDCD1-201ENST00000334409 NLRP1Q9C000 1473 aa23.02■■□□□ 1.28
PDCD1-201ENST00000334409 UBR1Q8IWV7 1749 aa23.01■■□□□ 1.27
PDCD1-201ENST00000334409 TMEM132EQ6IEE7 984 aa23.01■■□□□ 1.27
PDCD1-201ENST00000334409 NRXN1Q9ULB1 1477 aa23.01■■□□□ 1.27
PDCD1-201ENST00000334409 KDM4FA0A1W2PPD8 638 aa23■■□□□ 1.27
PDCD1-201ENST00000334409 PIK3C2GO75747 1445 aa22.99■■□□□ 1.27
PDCD1-201ENST00000334409 MYO3AQ8NEV4 1616 aa22.98■■□□□ 1.27
PDCD1-201ENST00000334409 ST20-MTHFSA0A0A6YYL1 179 aa22.97■■□□□ 1.27
PDCD1-201ENST00000334409 C14orf93Q9H972 538 aaKnown RBP22.97■■□□□ 1.27
PDCD1-201ENST00000334409 GPRASP1Q5JY77 1395 aa22.96■■□□□ 1.27
PDCD1-201ENST00000334409 TMEM2Q9UHN6 1383 aa22.96■■□□□ 1.27
PDCD1-201ENST00000334409 LTKP29376 864 aa22.96■■□□□ 1.27
PDCD1-201ENST00000334409 WASHC2AQ641Q2 1341 aa22.96■■□□□ 1.27
PDCD1-201ENST00000334409 ZFYVE9O95405 1425 aa22.96■■□□□ 1.27
PDCD1-201ENST00000334409 C11orf95C9JLR9 678 aaPredicted RBP22.95■■□□□ 1.26
PDCD1-201ENST00000334409 TXNDC2Q86VQ3 553 aa22.93■■□□□ 1.26
PDCD1-201ENST00000334409 THEMISQ8N1K5 641 aaPredicted RBP22.93■■□□□ 1.26
PDCD1-201ENST00000334409 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
PDCD1-201ENST00000334409 CEP170BQ9Y4F5 1589 aaPredicted RBP22.92■■□□□ 1.26
PDCD1-201ENST00000334409 SETD1BQ9UPS6 1966 aaKnown RBP22.92■■□□□ 1.26
PDCD1-201ENST00000334409 TRAK1Q9UPV9 953 aa22.9■■□□□ 1.26
PDCD1-201ENST00000334409 KIAA1210Q9ULL0 1709 aa22.9■■□□□ 1.26
PDCD1-201ENST00000334409 HDGFP51858 240 aaKnown RBP22.9■■□□□ 1.26
PDCD1-201ENST00000334409 STK26Q9P289 416 aa22.9■■□□□ 1.26
PDCD1-201ENST00000334409 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
PDCD1-201ENST00000334409 PPP4R2Q9NY27 417 aa22.89■■□□□ 1.25
PDCD1-201ENST00000334409 POLR3GLQ9BT43 218 aa22.88■■□□□ 1.25
PDCD1-201ENST00000334409 NOP58Q9Y2X3 529 aaKnown RBP22.88■■□□□ 1.25
PDCD1-201ENST00000334409 EID1Q9Y6B2 187 aa22.88■■□□□ 1.25
PDCD1-201ENST00000334409 ANO8Q9HCE9 1232 aaPredicted RBP22.87■■□□□ 1.25
PDCD1-201ENST00000334409 SCAF11Q99590 1463 aaKnown RBP22.86■■□□□ 1.25
PDCD1-201ENST00000334409 LAMC1P11047 1609 aa22.86■■□□□ 1.25
PDCD1-201ENST00000334409 ADGRB1O14514 1584 aa22.85■■□□□ 1.25
PDCD1-201ENST00000334409 ALKQ9UM73 1620 aa22.85■■□□□ 1.25
PDCD1-201ENST00000334409 SLC26A8Q96RN1 970 aa22.84■■□□□ 1.25
PDCD1-201ENST00000334409 IQGAP1P46940 1657 aa22.83■■□□□ 1.25
PDCD1-201ENST00000334409 SLIT1O75093 1534 aa22.82■■□□□ 1.24
PDCD1-201ENST00000334409 ASXL1Q8IXJ9 1541 aa22.82■■□□□ 1.24
PDCD1-201ENST00000334409 CCDC7Q96M83 1385 aa22.82■■□□□ 1.24
PDCD1-201ENST00000334409 ARHGAP23Q9P227 1491 aa22.82■■□□□ 1.24
PDCD1-201ENST00000334409 SETBP1Q9Y6X0 1596 aa22.81■■□□□ 1.24
PDCD1-201ENST00000334409 NRXN3Q9Y4C0 1643 aa22.81■■□□□ 1.24
PDCD1-201ENST00000334409 HNRNPUQ00839 825 aaKnown RBP eCLIP22.81■■□□□ 1.24
PDCD1-201ENST00000334409 SAFB2Q14151 953 aaKnown RBP eCLIP22.81■■□□□ 1.24
PDCD1-201ENST00000334409 TESK2Q96S53 571 aa22.81■■□□□ 1.24
PDCD1-201ENST00000334409 KIF7Q2M1P5 1343 aa22.81■■□□□ 1.24
PDCD1-201ENST00000334409 METP08581 1390 aa22.8■■□□□ 1.24
PDCD1-201ENST00000334409 ZNF142P52746 1687 aaPredicted RBP22.8■■□□□ 1.24
PDCD1-201ENST00000334409 PLEKHG1Q9ULL1 1385 aa22.78■■□□□ 1.24
PDCD1-201ENST00000334409 ANKLE2Q86XL3 938 aa22.78■■□□□ 1.24
PDCD1-201ENST00000334409 HSPA2P54652 639 aa22.77■■□□□ 1.24
PDCD1-201ENST00000334409 EIF3AQ14152 1382 aaKnown RBP22.76■■□□□ 1.23
PDCD1-201ENST00000334409 ADAMTS13Q76LX8 1427 aa22.76■■□□□ 1.23
PDCD1-201ENST00000334409 YTHDC2Q9H6S0 1430 aaKnown RBP22.76■■□□□ 1.23
PDCD1-201ENST00000334409 DISP3Q9P2K9 1392 aa22.76■■□□□ 1.23
PDCD1-201ENST00000334409 NCKAP5LQ9HCH0 1330 aa22.75■■□□□ 1.23
PDCD1-201ENST00000334409 SETD1AO15047 1707 aaKnown RBP22.75■■□□□ 1.23
PDCD1-201ENST00000334409 RTL5Q5HYW3 569 aaPredicted RBP22.74■■□□□ 1.23
PDCD1-201ENST00000334409 CENPJQ9HC77 1338 aaPredicted RBP22.74■■□□□ 1.23
PDCD1-201ENST00000334409 PRKRIP1Q9H875 184 aaPredicted RBP22.73■■□□□ 1.23
PDCD1-201ENST00000334409 POLR1AO95602 1720 aaPredicted RBP22.73■■□□□ 1.23
PDCD1-201ENST00000334409 WAPLQ7Z5K2 1190 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms