RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ADGRL2O95490 1459 aa10.69□□□□□ -0.7
SKA2-201ENST00000330137 ABCC5O15440 1437 aa10.68□□□□□ -0.7
SKA2-201ENST00000330137 NCLP19338 710 aaKnown RBP10.68□□□□□ -0.7
SKA2-201ENST00000330137 SKOR2Q2VWA4 1001 aaPredicted RBP10.68□□□□□ -0.7
SKA2-201ENST00000330137 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.68□□□□□ -0.7
SKA2-201ENST00000330137 TBC1D32Q96NH3 1257 aa10.68□□□□□ -0.7
SKA2-201ENST00000330137 ZNF521Q96K83 1311 aa10.68□□□□□ -0.7
SKA2-201ENST00000330137 HS1BP3Q53T59 392 aa10.68□□□□□ -0.7
SKA2-201ENST00000330137 DUSP27Q5VZP5 1158 aa10.68□□□□□ -0.7
SKA2-201ENST00000330137 CGNL1Q0VF96 1302 aa10.68□□□□□ -0.7
SKA2-201ENST00000330137 PER1O15534 1290 aaPredicted RBP10.67□□□□□ -0.7
SKA2-201ENST00000330137 TRAK2O60296 914 aa10.67□□□□□ -0.7
SKA2-201ENST00000330137 CHIC2Q9UKJ5 165 aa10.67□□□□□ -0.7
SKA2-201ENST00000330137 OFD1O75665 1012 aa10.67□□□□□ -0.7
SKA2-201ENST00000330137 PLXNC1O60486 1568 aa10.67□□□□□ -0.7
SKA2-201ENST00000330137 PDE3AQ14432 1141 aa10.66□□□□□ -0.7
SKA2-201ENST00000330137 TRMT2AQ8IZ69 625 aaKnown RBP10.66□□□□□ -0.7
SKA2-201ENST00000330137 KDM5DQ9BY66 1539 aa10.66□□□□□ -0.7
SKA2-201ENST00000330137 IBTKQ9P2D0 1353 aaPredicted RBP10.66□□□□□ -0.7
SKA2-201ENST00000330137 CCDC173Q0VFZ6 552 aa10.66□□□□□ -0.7
SKA2-201ENST00000330137 C20orf194Q5TEA3 1177 aa10.66□□□□□ -0.7
SKA2-201ENST00000330137 CARD11Q9BXL7 1154 aa10.66□□□□□ -0.7
SKA2-201ENST00000330137 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
SKA2-201ENST00000330137 PPP1R9BQ96SB3 815 aa10.65□□□□□ -0.7
SKA2-201ENST00000330137 ARID3CA6NKF2 412 aa10.65□□□□□ -0.7
SKA2-201ENST00000330137 UTP14CQ5TAP6 766 aaKnown RBP10.65□□□□□ -0.7
SKA2-201ENST00000330137 PANK2Q9BZ23 570 aa10.65□□□□□ -0.7
SKA2-201ENST00000330137 RBM10P98175 930 aaKnown RBP10.65□□□□□ -0.71
SKA2-201ENST00000330137 GOLGA2Q08379 1002 aa10.64□□□□□ -0.71
SKA2-201ENST00000330137 SKAP1Q86WV1 359 aa10.64□□□□□ -0.71
SKA2-201ENST00000330137 TBC1D2Q9BYX2 928 aa10.64□□□□□ -0.71
SKA2-201ENST00000330137 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
SKA2-201ENST00000330137 RGS3P49796 1198 aa10.64□□□□□ -0.71
SKA2-201ENST00000330137 ZSCAN30Q86W11 494 aa10.64□□□□□ -0.71
SKA2-201ENST00000330137 NKTRP30414 1462 aaKnown RBP10.64□□□□□ -0.71
SKA2-201ENST00000330137 COL17A1Q9UMD9 1497 aaPredicted RBP10.64□□□□□ -0.71
SKA2-201ENST00000330137 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
SKA2-201ENST00000330137 KIAA1211Q6ZU35 1233 aa10.63□□□□□ -0.71
SKA2-201ENST00000330137 SLKQ9H2G2 1235 aaPredicted RBP10.63□□□□□ -0.71
SKA2-201ENST00000330137 NCOA3Q9Y6Q9 1424 aa10.63□□□□□ -0.71
SKA2-201ENST00000330137 GPRASP1Q5JY77 1395 aa10.63□□□□□ -0.71
SKA2-201ENST00000330137 FGD1P98174 961 aa10.63□□□□□ -0.71
SKA2-201ENST00000330137 POLR3GLQ9BT43 218 aa10.62□□□□□ -0.71
SKA2-201ENST00000330137 ABCC2Q92887 1545 aa10.62□□□□□ -0.71
SKA2-201ENST00000330137 ERBB4Q15303 1308 aa10.62□□□□□ -0.71
SKA2-201ENST00000330137 SLFN5Q08AF3 891 aa10.62□□□□□ -0.71
SKA2-201ENST00000330137 PMFBP1Q8TBY8 1022 aa10.62□□□□□ -0.71
SKA2-201ENST00000330137 CROCC2H7BZ55 1655 aa10.62□□□□□ -0.71
SKA2-201ENST00000330137 TRPM1Q7Z4N2 1603 aa10.62□□□□□ -0.71
SKA2-201ENST00000330137 ST20-MTHFSA0A0A6YYL1 179 aa10.61□□□□□ -0.71
SKA2-201ENST00000330137 PLB1Q6P1J6 1458 aa10.61□□□□□ -0.71
SKA2-201ENST00000330137 ANP32BQ92688 251 aaKnown RBP10.6□□□□□ -0.71
SKA2-201ENST00000330137 ARHGAP31Q2M1Z3 1444 aa10.6□□□□□ -0.71
SKA2-201ENST00000330137 ITSN2Q9NZM3 1697 aa10.6□□□□□ -0.71
SKA2-201ENST00000330137 MCM5P33992 734 aa10.6□□□□□ -0.71
SKA2-201ENST00000330137 FAM69CQ0P6D2 419 aa10.6□□□□□ -0.71
SKA2-201ENST00000330137 DYNC1I1O14576 645 aa10.6□□□□□ -0.71
SKA2-201ENST00000330137 CSPP1Q1MSJ5 1256 aa10.6□□□□□ -0.71
SKA2-201ENST00000330137 ZNF500O60304 480 aaPredicted RBP10.59□□□□□ -0.71
SKA2-201ENST00000330137 DDIT3P35638 169 aa10.59□□□□□ -0.71
SKA2-201ENST00000330137 GBP4Q96PP9 640 aa10.59□□□□□ -0.71
SKA2-201ENST00000330137 PRDM15P57071 1507 aaPredicted RBP10.59□□□□□ -0.71
SKA2-201ENST00000330137 NCBP3Q53F19 620 aaKnown RBP10.59□□□□□ -0.71
SKA2-201ENST00000330137 CLUAP1Q96AJ1 413 aa10.59□□□□□ -0.71
SKA2-201ENST00000330137 PIK3C2GO75747 1445 aa10.59□□□□□ -0.71
SKA2-201ENST00000330137 MSNP26038 577 aaKnown RBP10.58□□□□□ -0.72
SKA2-201ENST00000330137 PLEKHH1Q9ULM0 1364 aa10.58□□□□□ -0.72
SKA2-201ENST00000330137 EIF2AK4Q9P2K8 1649 aaKnown RBP10.58□□□□□ -0.72
SKA2-201ENST00000330137 SEC24BO95487 1268 aa10.58□□□□□ -0.72
SKA2-201ENST00000330137 SNX21Q969T3 373 aa10.58□□□□□ -0.72
SKA2-201ENST00000330137 NPC1L1Q9UHC9 1359 aa10.57□□□□□ -0.72
SKA2-201ENST00000330137 E9PSI1 815 aa10.57□□□□□ -0.72
SKA2-201ENST00000330137 RIPK4P57078 832 aa10.57□□□□□ -0.72
SKA2-201ENST00000330137 CLEC17AQ6ZS10 378 aa10.57□□□□□ -0.72
SKA2-201ENST00000330137 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
SKA2-201ENST00000330137 UHRF1BP1LA0JNW5 1464 aa10.56□□□□□ -0.72
SKA2-201ENST00000330137 SHANK2Q9UPX8 1470 aa10.56□□□□□ -0.72
SKA2-201ENST00000330137 IGHDP01880 384 aa10.56□□□□□ -0.72
SKA2-201ENST00000330137 ZCCHC11Q5TAX3 1644 aaKnown RBP10.56□□□□□ -0.72
SKA2-201ENST00000330137 ABCC10Q5T3U5 1492 aa10.56□□□□□ -0.72
SKA2-201ENST00000330137 RTEL1-TNFRSF6BF6WH68 1400 aa10.56□□□□□ -0.72
SKA2-201ENST00000330137 ASXL2Q76L83 1435 aa10.55□□□□□ -0.72
SKA2-201ENST00000330137 PRAG1Q86YV5 1406 aa10.55□□□□□ -0.72
SKA2-201ENST00000330137 PKD2Q13563 968 aa10.55□□□□□ -0.72
SKA2-201ENST00000330137 WDR43Q15061 677 aaKnown RBP eCLIP10.55□□□□□ -0.72
SKA2-201ENST00000330137 SMC5Q8IY18 1101 aa10.55□□□□□ -0.72
SKA2-201ENST00000330137 ADAMTS8Q9UP79 889 aa10.55□□□□□ -0.72
SKA2-201ENST00000330137 ABCA8O94911 1581 aa10.54□□□□□ -0.72
SKA2-201ENST00000330137 KIF20AO95235 890 aa10.54□□□□□ -0.72
SKA2-201ENST00000330137 DMTNQ08495 405 aa10.54□□□□□ -0.72
SKA2-201ENST00000330137 CNGB1Q14028 1251 aaPredicted RBP10.54□□□□□ -0.72
SKA2-201ENST00000330137 HSCBQ8IWL3 235 aa10.54□□□□□ -0.72
SKA2-201ENST00000330137 GZF1Q9H116 711 aaPredicted RBP10.54□□□□□ -0.72
SKA2-201ENST00000330137 NOL7Q9UMY1 257 aaKnown RBP10.54□□□□□ -0.72
SKA2-201ENST00000330137 KIF13AQ9H1H9 1805 aa10.54□□□□□ -0.72
SKA2-201ENST00000330137 GTPBP4Q9BZE4 634 aaKnown RBP10.54□□□□□ -0.72
SKA2-201ENST00000330137 RAPGEF6Q8TEU7 1601 aa10.54□□□□□ -0.72
SKA2-201ENST00000330137 TSPOAP1O95153 1857 aa10.54□□□□□ -0.72
SKA2-201ENST00000330137 SENP3-EIF4A1A0A087X0R7 540 aa10.53□□□□□ -0.72
SKA2-201ENST00000330137 TNNT2P45379 298 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms