RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 NOP58Q9Y2X3 529 aaKnown RBP20.45■□□□□ 0.86
BRCC3-201ENST00000330045 NEO1Q92859 1461 aa20.44■□□□□ 0.86
BRCC3-201ENST00000330045 DIP2BQ9P265 1576 aa20.44■□□□□ 0.86
BRCC3-201ENST00000330045 TSPOAP1O95153 1857 aa20.43■□□□□ 0.86
BRCC3-201ENST00000330045 ABCA6Q8N139 1617 aa20.43■□□□□ 0.86
BRCC3-201ENST00000330045 MADDQ8WXG6 1647 aa20.43■□□□□ 0.86
BRCC3-201ENST00000330045 BLMP54132 1417 aaPredicted RBP20.43■□□□□ 0.86
BRCC3-201ENST00000330045 HECW2Q9P2P5 1572 aa20.43■□□□□ 0.86
BRCC3-201ENST00000330045 MLH3Q9UHC1 1453 aa20.43■□□□□ 0.86
BRCC3-201ENST00000330045 GGT6Q6P531 493 aa20.42■□□□□ 0.86
BRCC3-201ENST00000330045 CDCA7LQ96GN5 454 aa20.42■□□□□ 0.86
BRCC3-201ENST00000330045 IQGAP1P46940 1657 aa20.41■□□□□ 0.86
BRCC3-201ENST00000330045 VWDEQ8N2E2 1590 aa20.41■□□□□ 0.86
BRCC3-201ENST00000330045 TRPM2O94759 1503 aa20.41■□□□□ 0.86
BRCC3-201ENST00000330045 ANP32AP39687 249 aaKnown RBP20.41■□□□□ 0.86
BRCC3-201ENST00000330045 GLI2P10070 1586 aa20.4■□□□□ 0.86
BRCC3-201ENST00000330045 YEATS2Q9ULM3 1422 aa20.4■□□□□ 0.86
BRCC3-201ENST00000330045 SPHKAPQ2M3C7 1700 aa20.39■□□□□ 0.86
BRCC3-201ENST00000330045 CEP152O94986 1710 aa20.39■□□□□ 0.85
BRCC3-201ENST00000330045 RICTORQ6R327 1708 aa20.38■□□□□ 0.85
BRCC3-201ENST00000330045 KANK1Q14678 1352 aa20.38■□□□□ 0.85
BRCC3-201ENST00000330045 UGGT1Q9NYU2 1555 aa20.37■□□□□ 0.85
BRCC3-201ENST00000330045 IPO9Q96P70 1041 aaKnown RBP20.37■□□□□ 0.85
BRCC3-201ENST00000330045 PTPRTO14522 1441 aa20.37■□□□□ 0.85
BRCC3-201ENST00000330045 TET3O43151 1660 aa20.37■□□□□ 0.85
BRCC3-201ENST00000330045 PAK3O75914 559 aaPredicted RBP20.36■□□□□ 0.85
BRCC3-201ENST00000330045 BCL11AQ9H165 835 aa20.36■□□□□ 0.85
BRCC3-201ENST00000330045 PPRC1Q5VV67 1664 aaKnown RBP20.35■□□□□ 0.85
BRCC3-201ENST00000330045 CLTCL1P53675 1640 aa20.35■□□□□ 0.85
BRCC3-201ENST00000330045 TCERG1O14776 1098 aaKnown RBP20.34■□□□□ 0.85
BRCC3-201ENST00000330045 DIP2CQ9Y2E4 1556 aa20.34■□□□□ 0.85
BRCC3-201ENST00000330045 KNSTRNQ9Y448 316 aa20.33■□□□□ 0.84
BRCC3-201ENST00000330045 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
BRCC3-201ENST00000330045 SYNMO15061 1565 aa20.32■□□□□ 0.84
BRCC3-201ENST00000330045 SCAF11Q99590 1463 aaKnown RBP20.31■□□□□ 0.84
BRCC3-201ENST00000330045 ADAMTS8Q9UP79 889 aa20.31■□□□□ 0.84
BRCC3-201ENST00000330045 CDCA8Q53HL2 280 aa20.31■□□□□ 0.84
BRCC3-201ENST00000330045 CFAP65Q6ZU64 1925 aaKnown RBP20.31■□□□□ 0.84
BRCC3-201ENST00000330045 EFCAB6Q5THR3 1501 aa20.3■□□□□ 0.84
BRCC3-201ENST00000330045 PLIN1O60240 522 aa20.3■□□□□ 0.84
BRCC3-201ENST00000330045 ZBTB47Q9UFB7 747 aaPredicted RBP20.3■□□□□ 0.84
BRCC3-201ENST00000330045 PPP2R1AP30153 589 aa20.29■□□□□ 0.84
BRCC3-201ENST00000330045 NEURL4Q96JN8 1562 aa20.28■□□□□ 0.84
BRCC3-201ENST00000330045 KIAA1210Q9ULL0 1709 aa20.28■□□□□ 0.84
BRCC3-201ENST00000330045 AMER1Q5JTC6 1135 aaPredicted RBP20.28■□□□□ 0.84
BRCC3-201ENST00000330045 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.83
BRCC3-201ENST00000330045 MYOM1P52179 1685 aa20.27■□□□□ 0.83
BRCC3-201ENST00000330045 NPATQ14207 1427 aa20.26■□□□□ 0.83
BRCC3-201ENST00000330045 KIF13AQ9H1H9 1805 aa20.26■□□□□ 0.83
BRCC3-201ENST00000330045 MS4A1P11836 297 aa20.26■□□□□ 0.83
BRCC3-201ENST00000330045 PDE4AP27815 886 aa20.25■□□□□ 0.83
BRCC3-201ENST00000330045 CRBNQ96SW2 442 aa20.25■□□□□ 0.83
BRCC3-201ENST00000330045 NBR1Q14596 966 aa20.25■□□□□ 0.83
BRCC3-201ENST00000330045 ABCC3O15438 1527 aa20.23■□□□□ 0.83
BRCC3-201ENST00000330045 LMTK2Q8IWU2 1503 aa20.23■□□□□ 0.83
BRCC3-201ENST00000330045 ASXL1Q8IXJ9 1541 aa20.23■□□□□ 0.83
BRCC3-201ENST00000330045 BACH2Q9BYV9 841 aa20.22■□□□□ 0.83
BRCC3-201ENST00000330045 NPC1L1Q9UHC9 1359 aa20.22■□□□□ 0.83
BRCC3-201ENST00000330045 EIF3AQ14152 1382 aaKnown RBP20.21■□□□□ 0.83
BRCC3-201ENST00000330045 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
BRCC3-201ENST00000330045 PIK3C2GO75747 1445 aa20.2■□□□□ 0.82
BRCC3-201ENST00000330045 CHGAP10645 457 aaKnown RBP20.2■□□□□ 0.82
BRCC3-201ENST00000330045 DEKP35659 375 aaKnown RBP20.2■□□□□ 0.82
BRCC3-201ENST00000330045 NPM2Q86SE8 214 aaKnown RBP20.2■□□□□ 0.82
BRCC3-201ENST00000330045 KDM5AP29375 1690 aaKnown RBP20.19■□□□□ 0.82
BRCC3-201ENST00000330045 DUSP27Q5VZP5 1158 aa20.19■□□□□ 0.82
BRCC3-201ENST00000330045 MYOM2P54296 1465 aa20.19■□□□□ 0.82
BRCC3-201ENST00000330045 SIGLEC1Q9BZZ2 1709 aa20.18■□□□□ 0.82
BRCC3-201ENST00000330045 MROH2AA6NES4 1674 aa20.18■□□□□ 0.82
BRCC3-201ENST00000330045 ZNF521Q96K83 1311 aa20.18■□□□□ 0.82
BRCC3-201ENST00000330045 GOLGA2Q08379 1002 aa20.17■□□□□ 0.82
BRCC3-201ENST00000330045 C20orf194Q5TEA3 1177 aa20.17■□□□□ 0.82
BRCC3-201ENST00000330045 IFT172Q9UG01 1749 aa20.16■□□□□ 0.82
BRCC3-201ENST00000330045 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
BRCC3-201ENST00000330045 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
BRCC3-201ENST00000330045 SLC24A1O60721 1099 aa20.15■□□□□ 0.82
BRCC3-201ENST00000330045 KIF1BO60333 1816 aa20.15■□□□□ 0.82
BRCC3-201ENST00000330045 MLECQ14165 292 aa20.13■□□□□ 0.81
BRCC3-201ENST00000330045 CFAP70Q5T0N1 1121 aa20.13■□□□□ 0.81
BRCC3-201ENST00000330045 ERVK-7P63135 1459 aa20.13■□□□□ 0.81
BRCC3-201ENST00000330045 NUTM2DQ5VT03 806 aaPredicted RBP20.12■□□□□ 0.81
BRCC3-201ENST00000330045 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
BRCC3-201ENST00000330045 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.12■□□□□ 0.81
BRCC3-201ENST00000330045 SLFN5Q08AF3 891 aa20.11■□□□□ 0.81
BRCC3-201ENST00000330045 FBXO31Q5XUX0 539 aaPredicted RBP20.11■□□□□ 0.81
BRCC3-201ENST00000330045 NRXN1Q9ULB1 1477 aa20.11■□□□□ 0.81
BRCC3-201ENST00000330045 RTL5Q5HYW3 569 aaPredicted RBP20.11■□□□□ 0.81
BRCC3-201ENST00000330045 MYO3AQ8NEV4 1616 aa20.1■□□□□ 0.81
BRCC3-201ENST00000330045 SKAP1Q86WV1 359 aa20.1■□□□□ 0.81
BRCC3-201ENST00000330045 KDM2BQ8NHM5 1336 aa20.1■□□□□ 0.81
BRCC3-201ENST00000330045 CCDC146Q8IYE0 955 aa20.1■□□□□ 0.81
BRCC3-201ENST00000330045 NOS1P29475 1434 aa20.09■□□□□ 0.81
BRCC3-201ENST00000330045 CENPQQ7L2Z9 268 aaPredicted RBP20.09■□□□□ 0.81
BRCC3-201ENST00000330045 ADGRB3O60242 1522 aa20.08■□□□□ 0.81
BRCC3-201ENST00000330045 TRMT2AQ8IZ69 625 aaKnown RBP20.08■□□□□ 0.81
BRCC3-201ENST00000330045 SBNO2Q9Y2G9 1366 aa20.07■□□□□ 0.8
BRCC3-201ENST00000330045 APAF1O14727 1248 aa20.07■□□□□ 0.8
BRCC3-201ENST00000330045 IDI1Q13907 227 aa20.07■□□□□ 0.8
BRCC3-201ENST00000330045 CARD14Q9BXL6 1004 aa20.05■□□□□ 0.8
BRCC3-201ENST00000330045 SETBP1Q9Y6X0 1596 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms