RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 RIMS2Q9UQ26 1411 aa24.88■■□□□ 1.57
CLDN6-201ENST00000328796 CCDC144AA2RUR9 1427 aa24.86■■□□□ 1.57
CLDN6-201ENST00000328796 HDGFP51858 240 aaKnown RBP24.83■■□□□ 1.57
CLDN6-201ENST00000328796 ANKRD30BQ9BXX2 1392 aa24.82■■□□□ 1.56
CLDN6-201ENST00000328796 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.81■■□□□ 1.56
CLDN6-201ENST00000328796 PLEKHG1Q9ULL1 1385 aa24.79■■□□□ 1.56
CLDN6-201ENST00000328796 ZNF326Q5BKZ1 582 aaKnown RBP24.79■■□□□ 1.56
CLDN6-201ENST00000328796 NEXMIFQ5QGS0 1516 aa24.79■■□□□ 1.56
CLDN6-201ENST00000328796 SPATA31E1Q6ZUB1 1445 aa24.78■■□□□ 1.56
CLDN6-201ENST00000328796 LTBP4Q8N2S1 1624 aa24.78■■□□□ 1.56
CLDN6-201ENST00000328796 PPP1R15AO75807 674 aaPredicted RBP24.77■■□□□ 1.56
CLDN6-201ENST00000328796 ZNF335Q9H4Z2 1342 aaPredicted RBP24.76■■□□□ 1.55
CLDN6-201ENST00000328796 NUTM2DQ5VT03 806 aaPredicted RBP24.74■■□□□ 1.55
CLDN6-201ENST00000328796 RPGRIP1LQ68CZ1 1315 aa24.73■■□□□ 1.55
CLDN6-201ENST00000328796 PPLO60437 1756 aa24.73■■□□□ 1.55
CLDN6-201ENST00000328796 SLC26A8Q96RN1 970 aa24.69■■□□□ 1.54
CLDN6-201ENST00000328796 ADAMTS13Q76LX8 1427 aa24.69■■□□□ 1.54
CLDN6-201ENST00000328796 IFT172Q9UG01 1749 aa24.69■■□□□ 1.54
CLDN6-201ENST00000328796 STRCP1A6NGW2 1772 aa24.68■■□□□ 1.54
CLDN6-201ENST00000328796 SETBP1Q9Y6X0 1596 aa24.68■■□□□ 1.54
CLDN6-201ENST00000328796 NRXN3Q9Y4C0 1643 aa24.68■■□□□ 1.54
CLDN6-201ENST00000328796 CERKQ8TCT0 537 aa24.67■■□□□ 1.54
CLDN6-201ENST00000328796 BCANQ96GW7 911 aa24.67■■□□□ 1.54
CLDN6-201ENST00000328796 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
CLDN6-201ENST00000328796 RGL3Q3MIN7 710 aa24.67■■□□□ 1.54
CLDN6-201ENST00000328796 TBX22Q9Y458 520 aa24.67■■□□□ 1.54
CLDN6-201ENST00000328796 CPS1P31327 1500 aa24.66■■□□□ 1.54
CLDN6-201ENST00000328796 DHX57Q6P158 1386 aaKnown RBP24.66■■□□□ 1.54
CLDN6-201ENST00000328796 VGFO15240 615 aaPredicted RBP24.66■■□□□ 1.54
CLDN6-201ENST00000328796 SENP3Q9H4L4 574 aaPredicted RBP24.65■■□□□ 1.54
CLDN6-201ENST00000328796 PCGF6Q9BYE7 350 aa24.63■■□□□ 1.53
CLDN6-201ENST00000328796 CHD2O14647 1828 aaKnown RBP24.62■■□□□ 1.53
CLDN6-201ENST00000328796 IQSEC2Q5JU85 1478 aa24.62■■□□□ 1.53
CLDN6-201ENST00000328796 NWD1Q149M9 1564 aa24.61■■□□□ 1.53
CLDN6-201ENST00000328796 KCNA6P17658 529 aa24.6■■□□□ 1.53
CLDN6-201ENST00000328796 PIK3R4Q99570 1358 aa24.59■■□□□ 1.53
CLDN6-201ENST00000328796 ADGRF5Q8IZF2 1346 aa24.57■■□□□ 1.52
CLDN6-201ENST00000328796 SETD1AO15047 1707 aaKnown RBP24.57■■□□□ 1.52
CLDN6-201ENST00000328796 LRRC7Q96NW7 1537 aa24.56■■□□□ 1.52
CLDN6-201ENST00000328796 MYOM2P54296 1465 aa24.56■■□□□ 1.52
CLDN6-201ENST00000328796 ALKQ9UM73 1620 aa24.55■■□□□ 1.52
CLDN6-201ENST00000328796 NKTRP30414 1462 aaKnown RBP24.54■■□□□ 1.52
CLDN6-201ENST00000328796 NRXN1Q9ULB1 1477 aa24.54■■□□□ 1.52
CLDN6-201ENST00000328796 PIK3C2GO75747 1445 aa24.52■■□□□ 1.52
CLDN6-201ENST00000328796 METP08581 1390 aa24.52■■□□□ 1.52
CLDN6-201ENST00000328796 PTPRUQ92729 1446 aa24.52■■□□□ 1.52
CLDN6-201ENST00000328796 XIRP1Q702N8 1843 aaKnown RBP24.51■■□□□ 1.51
CLDN6-201ENST00000328796 XRN1Q8IZH2 1706 aaKnown RBP24.5■■□□□ 1.51
CLDN6-201ENST00000328796 STAC3Q96MF2 364 aa24.49■■□□□ 1.51
CLDN6-201ENST00000328796 FBXO41Q8TF61 875 aa24.48■■□□□ 1.51
CLDN6-201ENST00000328796 SIN3AQ96ST3 1273 aa24.48■■□□□ 1.51
CLDN6-201ENST00000328796 DCAF11Q8TEB1 546 aa24.47■■□□□ 1.51
CLDN6-201ENST00000328796 AMOTL2Q9Y2J4 779 aa24.47■■□□□ 1.51
CLDN6-201ENST00000328796 TMEM94Q12767 1356 aa24.45■■□□□ 1.51
CLDN6-201ENST00000328796 PROSER2Q86WR7 435 aaPredicted RBP24.45■■□□□ 1.5
CLDN6-201ENST00000328796 LAMC1P11047 1609 aa24.44■■□□□ 1.5
CLDN6-201ENST00000328796 C14orf93Q9H972 538 aaKnown RBP24.42■■□□□ 1.5
CLDN6-201ENST00000328796 KDM2AQ9Y2K7 1162 aa24.42■■□□□ 1.5
CLDN6-201ENST00000328796 ASXL1Q8IXJ9 1541 aa24.42■■□□□ 1.5
CLDN6-201ENST00000328796 PRAG1Q86YV5 1406 aa24.42■■□□□ 1.5
CLDN6-201ENST00000328796 NCOA3Q9Y6Q9 1424 aa24.4■■□□□ 1.5
CLDN6-201ENST00000328796 NEUROD1Q13562 356 aa24.4■■□□□ 1.5
CLDN6-201ENST00000328796 CFAP70Q5T0N1 1121 aa24.38■■□□□ 1.49
CLDN6-201ENST00000328796 RBM33Q96EV2 1170 aaKnown RBP24.38■■□□□ 1.49
CLDN6-201ENST00000328796 PTCH1Q13635 1447 aa24.38■■□□□ 1.49
CLDN6-201ENST00000328796 L3MBTL2Q969R5 705 aa24.37■■□□□ 1.49
CLDN6-201ENST00000328796 UBAP1LF5GYI3 381 aa24.36■■□□□ 1.49
CLDN6-201ENST00000328796 LRPPRCP42704 1394 aaKnown RBP24.36■■□□□ 1.49
CLDN6-201ENST00000328796 TMEM132EQ6IEE7 984 aa24.35■■□□□ 1.49
CLDN6-201ENST00000328796 KNDC1Q76NI1 1749 aa24.34■■□□□ 1.49
CLDN6-201ENST00000328796 TECPR2O15040 1411 aa24.34■■□□□ 1.49
CLDN6-201ENST00000328796 YTHDC2Q9H6S0 1430 aaKnown RBP24.33■■□□□ 1.49
CLDN6-201ENST00000328796 ABCC11Q96J66 1382 aa24.33■■□□□ 1.49
CLDN6-201ENST00000328796 TOM1O60784 492 aa24.33■■□□□ 1.49
CLDN6-201ENST00000328796 ADGRB1O14514 1584 aa24.33■■□□□ 1.49
CLDN6-201ENST00000328796 ROBO2Q9HCK4 1378 aa24.32■■□□□ 1.48
CLDN6-201ENST00000328796 KIAA1210Q9ULL0 1709 aa24.32■■□□□ 1.48
CLDN6-201ENST00000328796 CLSPNQ9HAW4 1339 aa24.31■■□□□ 1.48
CLDN6-201ENST00000328796 MSH6P52701 1360 aa24.31■■□□□ 1.48
CLDN6-201ENST00000328796 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.29■■□□□ 1.48
CLDN6-201ENST00000328796 STK26Q9P289 416 aa24.29■■□□□ 1.48
CLDN6-201ENST00000328796 C19orf44Q9H6X5 657 aa24.28■■□□□ 1.48
CLDN6-201ENST00000328796 ADGRL3Q9HAR2 1447 aa24.27■■□□□ 1.48
CLDN6-201ENST00000328796 C14orf37Q86TY3 774 aa24.27■■□□□ 1.48
CLDN6-201ENST00000328796 TONSLQ96HA7 1378 aa24.26■■□□□ 1.47
CLDN6-201ENST00000328796 NALCNQ8IZF0 1738 aa24.26■■□□□ 1.47
CLDN6-201ENST00000328796 SIRT1Q96EB6 747 aa24.26■■□□□ 1.47
CLDN6-201ENST00000328796 DCCP43146 1447 aa24.25■■□□□ 1.47
CLDN6-201ENST00000328796 DLC1Q96QB1 1528 aa24.25■■□□□ 1.47
CLDN6-201ENST00000328796 FAM135BQ49AJ0 1406 aa24.24■■□□□ 1.47
CLDN6-201ENST00000328796 TRPM1Q7Z4N2 1603 aa24.21■■□□□ 1.47
CLDN6-201ENST00000328796 PIP4K2BP78356 416 aa24.2■■□□□ 1.46
CLDN6-201ENST00000328796 CADPS2Q86UW7 1296 aa24.2■■□□□ 1.46
CLDN6-201ENST00000328796 PLEKHH1Q9ULM0 1364 aa24.2■■□□□ 1.46
CLDN6-201ENST00000328796 ATF3P18847 181 aa24.19■■□□□ 1.46
CLDN6-201ENST00000328796 NBPF1Q3BBV0 1214 aa24.19■■□□□ 1.46
CLDN6-201ENST00000328796 WAPLQ7Z5K2 1190 aa24.19■■□□□ 1.46
CLDN6-201ENST00000328796 CCER1Q8TC90 406 aaPredicted RBP24.18■■□□□ 1.46
CLDN6-201ENST00000328796 SLAIN2Q9P270 581 aa24.17■■□□□ 1.46
CLDN6-201ENST00000328796 SCAF1Q9H7N4 1312 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms