RNA–Protein interactions for RNA: ENST00000326974.8

KLHDC3-202, Transcript of kelch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHDC3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-202ENST00000326974 SCAF11Q99590 1463 aaKnown RBP23.21■■□□□ 1.31
KLHDC3-202ENST00000326974 NRXN1Q9ULB1 1477 aa23.2■■□□□ 1.31
KLHDC3-202ENST00000326974 SYNMO15061 1565 aa23.2■■□□□ 1.3
KLHDC3-202ENST00000326974 STAC3Q96MF2 364 aa23.19■■□□□ 1.3
KLHDC3-202ENST00000326974 PPLO60437 1756 aa23.18■■□□□ 1.3
KLHDC3-202ENST00000326974 WASHC2CQ9Y4E1 1318 aa23.18■■□□□ 1.3
KLHDC3-202ENST00000326974 NOS1P29475 1434 aa23.18■■□□□ 1.3
KLHDC3-202ENST00000326974 PIK3C2BO00750 1634 aa23.17■■□□□ 1.3
KLHDC3-202ENST00000326974 ZC3H13Q5T200 1668 aaKnown RBP23.17■■□□□ 1.3
KLHDC3-202ENST00000326974 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
KLHDC3-202ENST00000326974 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.3
KLHDC3-202ENST00000326974 TMF1P82094 1093 aa23.14■■□□□ 1.29
KLHDC3-202ENST00000326974 MYOM1P52179 1685 aa23.12■■□□□ 1.29
KLHDC3-202ENST00000326974 PARD3Q8TEW0 1356 aa23.11■■□□□ 1.29
KLHDC3-202ENST00000326974 CHGAP10645 457 aaKnown RBP23.1■■□□□ 1.29
KLHDC3-202ENST00000326974 ARHGAP31Q2M1Z3 1444 aa23.1■■□□□ 1.29
KLHDC3-202ENST00000326974 PIK3C2GO75747 1445 aa23.08■■□□□ 1.29
KLHDC3-202ENST00000326974 KTN1Q86UP2 1357 aaKnown RBP23.07■■□□□ 1.28
KLHDC3-202ENST00000326974 MYBBP1AQ9BQG0 1328 aaKnown RBP23.07■■□□□ 1.28
KLHDC3-202ENST00000326974 PREX1Q8TCU6 1659 aa23.07■■□□□ 1.28
KLHDC3-202ENST00000326974 PANK3Q9H999 370 aa23.07■■□□□ 1.28
KLHDC3-202ENST00000326974 MYO3AQ8NEV4 1616 aa23.07■■□□□ 1.28
KLHDC3-202ENST00000326974 ZBED9Q6R2W3 1325 aa23.06■■□□□ 1.28
KLHDC3-202ENST00000326974 FKBP8Q14318 412 aa23.06■■□□□ 1.28
KLHDC3-202ENST00000326974 RALBP1Q15311 655 aa23.06■■□□□ 1.28
KLHDC3-202ENST00000326974 PNISRQ8TF01 805 aaKnown RBP23.06■■□□□ 1.28
KLHDC3-202ENST00000326974 SETBP1Q9Y6X0 1596 aa23.06■■□□□ 1.28
KLHDC3-202ENST00000326974 NEXMIFQ5QGS0 1516 aa23.05■■□□□ 1.28
KLHDC3-202ENST00000326974 ADGRB1O14514 1584 aa23.04■■□□□ 1.28
KLHDC3-202ENST00000326974 REREQ9P2R6 1566 aa23.04■■□□□ 1.28
KLHDC3-202ENST00000326974 MYO5BQ9ULV0 1848 aa23.04■■□□□ 1.28
KLHDC3-202ENST00000326974 BRD4O60885 1362 aaPredicted RBP23.04■■□□□ 1.28
KLHDC3-202ENST00000326974 EIF3AQ14152 1382 aaKnown RBP23.04■■□□□ 1.28
KLHDC3-202ENST00000326974 ERVK-7P63135 1459 aa23.03■■□□□ 1.28
KLHDC3-202ENST00000326974 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
KLHDC3-202ENST00000326974 LRPPRCP42704 1394 aaKnown RBP23.01■■□□□ 1.27
KLHDC3-202ENST00000326974 TMC1Q8TDI8 760 aa23.01■■□□□ 1.27
KLHDC3-202ENST00000326974 CC2D1BQ5T0F9 858 aaKnown RBP22.99■■□□□ 1.27
KLHDC3-202ENST00000326974 BCANQ96GW7 911 aa22.99■■□□□ 1.27
KLHDC3-202ENST00000326974 AGLP35573 1532 aa22.99■■□□□ 1.27
KLHDC3-202ENST00000326974 TMEM131LA2VDJ0 1609 aa22.97■■□□□ 1.27
KLHDC3-202ENST00000326974 IDI1Q13907 227 aa22.97■■□□□ 1.27
KLHDC3-202ENST00000326974 C14orf93Q9H972 538 aaKnown RBP22.97■■□□□ 1.27
KLHDC3-202ENST00000326974 RPGRIP1LQ68CZ1 1315 aa22.96■■□□□ 1.27
KLHDC3-202ENST00000326974 SENP3-EIF4A1A0A087X0R7 540 aa22.96■■□□□ 1.27
KLHDC3-202ENST00000326974 NUTM2DQ5VT03 806 aaPredicted RBP22.96■■□□□ 1.27
KLHDC3-202ENST00000326974 CLTCQ00610 1675 aaKnown RBP22.95■■□□□ 1.27
KLHDC3-202ENST00000326974 QRICH2Q9H0J4 1663 aa22.95■■□□□ 1.27
KLHDC3-202ENST00000326974 ARHGEF40Q8TER5 1519 aa22.95■■□□□ 1.26
KLHDC3-202ENST00000326974 NLRP13Q86W25 1043 aa22.95■■□□□ 1.26
KLHDC3-202ENST00000326974 FBXO31Q5XUX0 539 aaPredicted RBP22.93■■□□□ 1.26
KLHDC3-202ENST00000326974 TMEM132EQ6IEE7 984 aa22.92■■□□□ 1.26
KLHDC3-202ENST00000326974 NEFLP07196 543 aa22.92■■□□□ 1.26
KLHDC3-202ENST00000326974 SBNO2Q9Y2G9 1366 aa22.91■■□□□ 1.26
KLHDC3-202ENST00000326974 ASXL1Q8IXJ9 1541 aa22.91■■□□□ 1.26
KLHDC3-202ENST00000326974 CDCA8Q53HL2 280 aa22.91■■□□□ 1.26
KLHDC3-202ENST00000326974 ARHGEF28Q8N1W1 1705 aaKnown RBP22.91■■□□□ 1.26
KLHDC3-202ENST00000326974 AMER1Q5JTC6 1135 aaPredicted RBP22.9■■□□□ 1.26
KLHDC3-202ENST00000326974 TRAK1Q9UPV9 953 aa22.9■■□□□ 1.26
KLHDC3-202ENST00000326974 CENPJQ9HC77 1338 aaPredicted RBP22.89■■□□□ 1.25
KLHDC3-202ENST00000326974 SLC52A1Q9NWF4 448 aa22.88■■□□□ 1.25
KLHDC3-202ENST00000326974 ZFYVE9O95405 1425 aa22.86■■□□□ 1.25
KLHDC3-202ENST00000326974 IRX6P78412 446 aaPredicted RBP22.86■■□□□ 1.25
KLHDC3-202ENST00000326974 SMG6Q86US8 1419 aaKnown RBP22.85■■□□□ 1.25
KLHDC3-202ENST00000326974 KNSTRNQ9Y448 316 aa22.84■■□□□ 1.25
KLHDC3-202ENST00000326974 SPATA31D1Q6ZQQ2 1576 aa22.84■■□□□ 1.25
KLHDC3-202ENST00000326974 VGFO15240 615 aaPredicted RBP22.83■■□□□ 1.25
KLHDC3-202ENST00000326974 SENP3Q9H4L4 574 aaPredicted RBP22.82■■□□□ 1.24
KLHDC3-202ENST00000326974 TULP4Q9NRJ4 1543 aa22.81■■□□□ 1.24
KLHDC3-202ENST00000326974 MLECQ14165 292 aa22.81■■□□□ 1.24
KLHDC3-202ENST00000326974 CARD14Q9BXL6 1004 aa22.8■■□□□ 1.24
KLHDC3-202ENST00000326974 BLMP54132 1417 aaPredicted RBP22.8■■□□□ 1.24
KLHDC3-202ENST00000326974 PPP2R1AP30153 589 aa22.8■■□□□ 1.24
KLHDC3-202ENST00000326974 NPC1L1Q9UHC9 1359 aa22.79■■□□□ 1.24
KLHDC3-202ENST00000326974 PPP6R1Q9UPN7 881 aa22.77■■□□□ 1.24
KLHDC3-202ENST00000326974 NUDCQ9Y266 331 aa22.77■■□□□ 1.24
KLHDC3-202ENST00000326974 SLC24A1O60721 1099 aa22.76■■□□□ 1.23
KLHDC3-202ENST00000326974 A2ML1A8K2U0 1454 aa22.76■■□□□ 1.23
KLHDC3-202ENST00000326974 ALKQ9UM73 1620 aa22.74■■□□□ 1.23
KLHDC3-202ENST00000326974 PTPRMP28827 1452 aa22.74■■□□□ 1.23
KLHDC3-202ENST00000326974 INSRP06213 1382 aa22.72■■□□□ 1.23
KLHDC3-202ENST00000326974 SETD1AO15047 1707 aaKnown RBP22.71■■□□□ 1.23
KLHDC3-202ENST00000326974 SLC12A5Q9H2X9 1139 aa22.7■■□□□ 1.22
KLHDC3-202ENST00000326974 SALL2Q9Y467 1007 aaPredicted RBP22.7■■□□□ 1.22
KLHDC3-202ENST00000326974 NSD3Q9BZ95 1437 aa22.7■■□□□ 1.22
KLHDC3-202ENST00000326974 STK26Q9P289 416 aa22.69■■□□□ 1.22
KLHDC3-202ENST00000326974 YTHDC2Q9H6S0 1430 aaKnown RBP22.69■■□□□ 1.22
KLHDC3-202ENST00000326974 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
KLHDC3-202ENST00000326974 SAFB2Q14151 953 aaKnown RBP eCLIP22.67■■□□□ 1.22
KLHDC3-202ENST00000326974 ADAMTS8Q9UP79 889 aa22.67■■□□□ 1.22
KLHDC3-202ENST00000326974 ZMYM3Q14202 1370 aa22.66■■□□□ 1.22
KLHDC3-202ENST00000326974 RIMS2Q9UQ26 1411 aa22.66■■□□□ 1.22
KLHDC3-202ENST00000326974 NRXN3Q9Y4C0 1643 aa22.66■■□□□ 1.22
KLHDC3-202ENST00000326974 RNF123Q5XPI4 1314 aa22.66■■□□□ 1.22
KLHDC3-202ENST00000326974 STAG3Q9UJ98 1225 aa22.65■■□□□ 1.22
KLHDC3-202ENST00000326974 EVC2Q86UK5 1308 aa22.63■■□□□ 1.21
KLHDC3-202ENST00000326974 CABP2Q9NPB3 220 aa22.63■■□□□ 1.21
KLHDC3-202ENST00000326974 TSHZ2Q9NRE2 1034 aa22.62■■□□□ 1.21
KLHDC3-202ENST00000326974 PELP1Q8IZL8 1130 aaKnown RBP22.61■■□□□ 1.21
KLHDC3-202ENST00000326974 CDCA7LQ96GN5 454 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms