RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 RIMS2Q9UQ26 1411 aa43.47■■■■■ 4.55
SYNGR1-202ENST00000318801 ZFYVE9O95405 1425 aa43.4■■■■■ 4.54
SYNGR1-202ENST00000318801 SETD5Q9C0A6 1442 aa43.4■■■■■ 4.54
SYNGR1-202ENST00000318801 UBAP1LF5GYI3 381 aa43.4■■■■■ 4.54
SYNGR1-202ENST00000318801 SLC26A8Q96RN1 970 aa43.39■■■■■ 4.54
SYNGR1-202ENST00000318801 ZNF326Q5BKZ1 582 aaKnown RBP43.38■■■■■ 4.53
SYNGR1-202ENST00000318801 PLEKHG1Q9ULL1 1385 aa43.36■■■■■ 4.53
SYNGR1-202ENST00000318801 TRPM2O94759 1503 aa43.34■■■■■ 4.53
SYNGR1-202ENST00000318801 MPHOSPH9Q99550 1183 aa43.31■■■■■ 4.52
SYNGR1-202ENST00000318801 TOM1O60784 492 aa43.3■■■■■ 4.52
SYNGR1-202ENST00000318801 NUTM2DQ5VT03 806 aaPredicted RBP43.29■■■■■ 4.52
SYNGR1-202ENST00000318801 KCNA6P17658 529 aa43.28■■■■■ 4.52
SYNGR1-202ENST00000318801 SENP3Q9H4L4 574 aaPredicted RBP43.28■■■■■ 4.52
SYNGR1-202ENST00000318801 KIF1BO60333 1816 aa43.26■■■■■ 4.51
SYNGR1-202ENST00000318801 STRCP1A6NGW2 1772 aa43.25■■■■■ 4.51
SYNGR1-202ENST00000318801 CLTCL1P53675 1640 aa43.25■■■■■ 4.51
SYNGR1-202ENST00000318801 TBX22Q9Y458 520 aa43.24■■■■■ 4.51
SYNGR1-202ENST00000318801 LRRC7Q96NW7 1537 aa43.23■■■■■ 4.51
SYNGR1-202ENST00000318801 RAB3GAP2Q9H2M9 1393 aa43.2■■■■■ 4.51
SYNGR1-202ENST00000318801 FOXD1Q16676 465 aa43.19■■■■■ 4.5
SYNGR1-202ENST00000318801 PROSER2Q86WR7 435 aaPredicted RBP43.15■■■■■ 4.5
SYNGR1-202ENST00000318801 SCAF1Q9H7N4 1312 aaKnown RBP43.14■■■■■ 4.5
SYNGR1-202ENST00000318801 CCDC144AA2RUR9 1427 aa43.12■■■■■ 4.49
SYNGR1-202ENST00000318801 PIP4K2BP78356 416 aa43.1■■■■■ 4.49
SYNGR1-202ENST00000318801 RPGRIP1LQ68CZ1 1315 aa43.1■■■■■ 4.49
SYNGR1-202ENST00000318801 DIP2AQ14689 1571 aa43.09■■■■■ 4.49
SYNGR1-202ENST00000318801 VGFO15240 615 aaPredicted RBP43.09■■■■■ 4.49
SYNGR1-202ENST00000318801 HRCP23327 699 aa43.09■■■■■ 4.49
SYNGR1-202ENST00000318801 PIK3R4Q99570 1358 aa43.07■■■■■ 4.49
SYNGR1-202ENST00000318801 NKTRP30414 1462 aaKnown RBP43.06■■■■■ 4.48
SYNGR1-202ENST00000318801 ADAMTS13Q76LX8 1427 aa43.05■■■■■ 4.48
SYNGR1-202ENST00000318801 CHD2O14647 1828 aaKnown RBP43.03■■■■■ 4.48
SYNGR1-202ENST00000318801 TMEM94Q12767 1356 aa43.03■■■■■ 4.48
SYNGR1-202ENST00000318801 NWD1Q149M9 1564 aa43.02■■■■■ 4.48
SYNGR1-202ENST00000318801 NEXMIFQ5QGS0 1516 aa43■■■■■ 4.47
SYNGR1-202ENST00000318801 SETBP1Q9Y6X0 1596 aa42.97■■■■■ 4.47
SYNGR1-202ENST00000318801 XIRP1Q702N8 1843 aaKnown RBP42.94■■■■■ 4.46
SYNGR1-202ENST00000318801 RGL3Q3MIN7 710 aa42.93■■■■■ 4.46
SYNGR1-202ENST00000318801 AMOTL2Q9Y2J4 779 aa42.92■■■■■ 4.46
SYNGR1-202ENST00000318801 RBM33Q96EV2 1170 aaKnown RBP42.91■■■■■ 4.46
SYNGR1-202ENST00000318801 C14orf37Q86TY3 774 aa42.9■■■■■ 4.46
SYNGR1-202ENST00000318801 MSH6P52701 1360 aa42.89■■■■■ 4.46
SYNGR1-202ENST00000318801 NRXN3Q9Y4C0 1643 aa42.85■■■■■ 4.45
SYNGR1-202ENST00000318801 NCOA3Q9Y6Q9 1424 aa42.85■■■■■ 4.45
SYNGR1-202ENST00000318801 PPLO60437 1756 aa42.83■■■■■ 4.45
SYNGR1-202ENST00000318801 ANKRD30BQ9BXX2 1392 aa42.82■■■■■ 4.45
SYNGR1-202ENST00000318801 SPATA31E1Q6ZUB1 1445 aa42.82■■■■■ 4.45
SYNGR1-202ENST00000318801 ALKQ9UM73 1620 aa42.79■■■■■ 4.44
SYNGR1-202ENST00000318801 METP08581 1390 aa42.79■■■■■ 4.44
SYNGR1-202ENST00000318801 HSPA1LP34931 641 aa42.79■■■■■ 4.44
SYNGR1-202ENST00000318801 PTPRUQ92729 1446 aa42.77■■■■■ 4.44
SYNGR1-202ENST00000318801 C19orf44Q9H6X5 657 aa42.75■■■■■ 4.43
SYNGR1-202ENST00000318801 ATF3P18847 181 aa42.71■■■■■ 4.43
SYNGR1-202ENST00000318801 SLAIN2Q9P270 581 aa42.7■■■■■ 4.43
SYNGR1-202ENST00000318801 CADPS2Q86UW7 1296 aa42.69■■■■■ 4.42
SYNGR1-202ENST00000318801 FAM135BQ49AJ0 1406 aa42.68■■■■■ 4.42
SYNGR1-202ENST00000318801 ADGRF5Q8IZF2 1346 aa42.68■■■■■ 4.42
SYNGR1-202ENST00000318801 XRN1Q8IZH2 1706 aaKnown RBP42.67■■■■■ 4.42
SYNGR1-202ENST00000318801 IFT172Q9UG01 1749 aa42.62■■■■■ 4.41
SYNGR1-202ENST00000318801 SETD1AO15047 1707 aaKnown RBP42.56■■■■■ 4.4
SYNGR1-202ENST00000318801 SIPA1L2Q9P2F8 1722 aaPredicted RBP42.56■■■■■ 4.4
SYNGR1-202ENST00000318801 STAC3Q96MF2 364 aa42.52■■■■■ 4.4
SYNGR1-202ENST00000318801 PIK3C2GO75747 1445 aa42.52■■■■■ 4.4
SYNGR1-202ENST00000318801 DCCP43146 1447 aa42.52■■■■■ 4.4
SYNGR1-202ENST00000318801 ROBO1Q9Y6N7 1651 aa42.51■■■■■ 4.4
SYNGR1-202ENST00000318801 PTCH1Q13635 1447 aa42.51■■■■■ 4.4
SYNGR1-202ENST00000318801 DISP3Q9P2K9 1392 aa42.5■■■■■ 4.39
SYNGR1-202ENST00000318801 MYOM2P54296 1465 aa42.48■■■■■ 4.39
SYNGR1-202ENST00000318801 DCAF11Q8TEB1 546 aa42.46■■■■■ 4.39
SYNGR1-202ENST00000318801 C14orf93Q9H972 538 aaKnown RBP42.46■■■■■ 4.39
SYNGR1-202ENST00000318801 STK26Q9P289 416 aa42.46■■■■■ 4.39
SYNGR1-202ENST00000318801 ADGRL3Q9HAR2 1447 aa42.45■■■■■ 4.39
SYNGR1-202ENST00000318801 PRAG1Q86YV5 1406 aa42.45■■■■■ 4.39
SYNGR1-202ENST00000318801 ROBO2Q9HCK4 1378 aa42.44■■■■■ 4.38
SYNGR1-202ENST00000318801 TRIM26Q12899 539 aaPredicted RBP42.44■■■■■ 4.38
SYNGR1-202ENST00000318801 KDM2AQ9Y2K7 1162 aa42.43■■■■■ 4.38
SYNGR1-202ENST00000318801 TMEM132EQ6IEE7 984 aa42.42■■■■■ 4.38
SYNGR1-202ENST00000318801 NRXN1Q9ULB1 1477 aa42.4■■■■■ 4.38
SYNGR1-202ENST00000318801 LRPPRCP42704 1394 aaKnown RBP42.4■■■■■ 4.38
SYNGR1-202ENST00000318801 CFAP70Q5T0N1 1121 aa42.38■■■■■ 4.37
SYNGR1-202ENST00000318801 DHX57Q6P158 1386 aaKnown RBP42.37■■■■■ 4.37
SYNGR1-202ENST00000318801 ABCC11Q96J66 1382 aa42.37■■■■■ 4.37
SYNGR1-202ENST00000318801 LAMC1P11047 1609 aa42.37■■■■■ 4.37
SYNGR1-202ENST00000318801 NALCNQ8IZF0 1738 aa42.32■■■■■ 4.37
SYNGR1-202ENST00000318801 YTHDC2Q9H6S0 1430 aaKnown RBP42.32■■■■■ 4.37
SYNGR1-202ENST00000318801 TECPR2O15040 1411 aa42.31■■■■■ 4.36
SYNGR1-202ENST00000318801 BRINP3Q76B58 766 aa42.29■■■■■ 4.36
SYNGR1-202ENST00000318801 PHLPP1O60346 1717 aa42.29■■■■■ 4.36
SYNGR1-202ENST00000318801 SIRT1Q96EB6 747 aa42.28■■■■■ 4.36
SYNGR1-202ENST00000318801 MST1RQ04912 1400 aa42.28■■■■■ 4.36
SYNGR1-202ENST00000318801 WAPLQ7Z5K2 1190 aa42.26■■■■■ 4.35
SYNGR1-202ENST00000318801 ASXL1Q8IXJ9 1541 aa42.24■■■■■ 4.35
SYNGR1-202ENST00000318801 KNDC1Q76NI1 1749 aa42.23■■■■■ 4.35
SYNGR1-202ENST00000318801 MED1Q15648 1581 aaPredicted RBP42.21■■■■■ 4.35
SYNGR1-202ENST00000318801 PHF23Q9BUL5 403 aaPredicted RBP42.2■■■■■ 4.35
SYNGR1-202ENST00000318801 JCADQ9P266 1359 aa42.17■■■■■ 4.34
SYNGR1-202ENST00000318801 AHDC1Q5TGY3 1603 aaPredicted RBP42.16■■■■■ 4.34
SYNGR1-202ENST00000318801 POGKQ9P215 609 aa42.15■■■■■ 4.34
SYNGR1-202ENST00000318801 C1orf167Q5SNV9 1468 aa42.15■■■■■ 4.34
SYNGR1-202ENST00000318801 PRAM1Q96QH2 718 aa42.11■■■■■ 4.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms