RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 ANKLE2Q86XL3 938 aa22.25■■□□□ 1.15
HNF4A-202ENST00000316673 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.25■■□□□ 1.15
HNF4A-202ENST00000316673 MYO5BQ9ULV0 1848 aa22.25■■□□□ 1.15
HNF4A-202ENST00000316673 RIMS2Q9UQ26 1411 aa22.21■■□□□ 1.15
HNF4A-202ENST00000316673 STAC3Q96MF2 364 aa22.21■■□□□ 1.15
HNF4A-202ENST00000316673 ZFYVE9O95405 1425 aa22.2■■□□□ 1.15
HNF4A-202ENST00000316673 SCAF11Q99590 1463 aaKnown RBP22.2■■□□□ 1.14
HNF4A-202ENST00000316673 TXNDC2Q86VQ3 553 aa22.2■■□□□ 1.14
HNF4A-202ENST00000316673 RGL3Q3MIN7 710 aa22.19■■□□□ 1.14
HNF4A-202ENST00000316673 VGFO15240 615 aaPredicted RBP22.18■■□□□ 1.14
HNF4A-202ENST00000316673 PPP1R15AO75807 674 aaPredicted RBP22.18■■□□□ 1.14
HNF4A-202ENST00000316673 SIN3AQ96ST3 1273 aa22.18■■□□□ 1.14
HNF4A-202ENST00000316673 NEUROD1Q13562 356 aa22.17■■□□□ 1.14
HNF4A-202ENST00000316673 DMRT2Q9Y5R5 561 aa22.17■■□□□ 1.14
HNF4A-202ENST00000316673 POLR1AO95602 1720 aaPredicted RBP22.17■■□□□ 1.14
HNF4A-202ENST00000316673 NEXMIFQ5QGS0 1516 aa22.17■■□□□ 1.14
HNF4A-202ENST00000316673 MED14O60244 1454 aa22.15■■□□□ 1.14
HNF4A-202ENST00000316673 LTKP29376 864 aa22.15■■□□□ 1.14
HNF4A-202ENST00000316673 CERKQ8TCT0 537 aa22.15■■□□□ 1.14
HNF4A-202ENST00000316673 PPLO60437 1756 aa22.14■■□□□ 1.14
HNF4A-202ENST00000316673 NCKAP5LQ9HCH0 1330 aa22.13■■□□□ 1.13
HNF4A-202ENST00000316673 STRCQ7RTU9 1775 aa22.12■■□□□ 1.13
HNF4A-202ENST00000316673 TONSLQ96HA7 1378 aa22.12■■□□□ 1.13
HNF4A-202ENST00000316673 PLEKHG1Q9ULL1 1385 aa22.12■■□□□ 1.13
HNF4A-202ENST00000316673 IFT172Q9UG01 1749 aa22.11■■□□□ 1.13
HNF4A-202ENST00000316673 NPHP4O75161 1426 aaPredicted RBP22.11■■□□□ 1.13
HNF4A-202ENST00000316673 MYOM2P54296 1465 aa22.1■■□□□ 1.13
HNF4A-202ENST00000316673 DCAF11Q8TEB1 546 aa22.09■■□□□ 1.13
HNF4A-202ENST00000316673 IQGAP1P46940 1657 aa22.08■■□□□ 1.13
HNF4A-202ENST00000316673 NUTM2DQ5VT03 806 aaPredicted RBP22.08■■□□□ 1.12
HNF4A-202ENST00000316673 L3MBTL2Q969R5 705 aa22.07■■□□□ 1.12
HNF4A-202ENST00000316673 BCANQ96GW7 911 aa22.07■■□□□ 1.12
HNF4A-202ENST00000316673 SETBP1Q9Y6X0 1596 aa22.05■■□□□ 1.12
HNF4A-202ENST00000316673 NRXN1Q9ULB1 1477 aa22.04■■□□□ 1.12
HNF4A-202ENST00000316673 DIP2AQ14689 1571 aa22.03■■□□□ 1.12
HNF4A-202ENST00000316673 ADGRF5Q8IZF2 1346 aa22.03■■□□□ 1.12
HNF4A-202ENST00000316673 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
HNF4A-202ENST00000316673 PIK3C2GO75747 1445 aa22.02■■□□□ 1.12
HNF4A-202ENST00000316673 TBX22Q9Y458 520 aa22.02■■□□□ 1.12
HNF4A-202ENST00000316673 ADAMTS13Q76LX8 1427 aa21.99■■□□□ 1.11
HNF4A-202ENST00000316673 PIK3R4Q99570 1358 aa21.98■■□□□ 1.11
HNF4A-202ENST00000316673 LAMC1P11047 1609 aa21.97■■□□□ 1.11
HNF4A-202ENST00000316673 NRXN3Q9Y4C0 1643 aa21.97■■□□□ 1.11
HNF4A-202ENST00000316673 SLC26A8Q96RN1 970 aa21.97■■□□□ 1.11
HNF4A-202ENST00000316673 PRAG1Q86YV5 1406 aa21.96■■□□□ 1.11
HNF4A-202ENST00000316673 C14orf93Q9H972 538 aaKnown RBP21.96■■□□□ 1.11
HNF4A-202ENST00000316673 ALKQ9UM73 1620 aa21.95■■□□□ 1.11
HNF4A-202ENST00000316673 KIAA1210Q9ULL0 1709 aa21.91■■□□□ 1.1
HNF4A-202ENST00000316673 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
HNF4A-202ENST00000316673 SETD1AO15047 1707 aaKnown RBP21.9■■□□□ 1.1
HNF4A-202ENST00000316673 CFAP70Q5T0N1 1121 aa21.9■■□□□ 1.1
HNF4A-202ENST00000316673 KCNA6P17658 529 aa21.89■■□□□ 1.09
HNF4A-202ENST00000316673 METP08581 1390 aa21.87■■□□□ 1.09
HNF4A-202ENST00000316673 CHD2O14647 1828 aaKnown RBP21.86■■□□□ 1.09
HNF4A-202ENST00000316673 DISP3Q9P2K9 1392 aa21.85■■□□□ 1.09
HNF4A-202ENST00000316673 NWD1Q149M9 1564 aa21.85■■□□□ 1.09
HNF4A-202ENST00000316673 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
HNF4A-202ENST00000316673 ZNF335Q9H4Z2 1342 aaPredicted RBP21.83■■□□□ 1.09
HNF4A-202ENST00000316673 NKTRP30414 1462 aaKnown RBP21.83■■□□□ 1.09
HNF4A-202ENST00000316673 CPS1P31327 1500 aa21.83■■□□□ 1.09
HNF4A-202ENST00000316673 TRPM1Q7Z4N2 1603 aa21.83■■□□□ 1.09
HNF4A-202ENST00000316673 NBPF8Q3BBV2 869 aa21.83■■□□□ 1.08
HNF4A-202ENST00000316673 LRPPRCP42704 1394 aaKnown RBP21.83■■□□□ 1.08
HNF4A-202ENST00000316673 ADGRB1O14514 1584 aa21.83■■□□□ 1.08
HNF4A-202ENST00000316673 RALGAPBQ86X10 1494 aa21.82■■□□□ 1.08
HNF4A-202ENST00000316673 YTHDC2Q9H6S0 1430 aaKnown RBP21.82■■□□□ 1.08
HNF4A-202ENST00000316673 ABCC11Q96J66 1382 aa21.82■■□□□ 1.08
HNF4A-202ENST00000316673 ROCK2O75116 1388 aaKnown RBP21.81■■□□□ 1.08
HNF4A-202ENST00000316673 TMEM132EQ6IEE7 984 aa21.81■■□□□ 1.08
HNF4A-202ENST00000316673 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
HNF4A-202ENST00000316673 PTPRUQ92729 1446 aa21.8■■□□□ 1.08
HNF4A-202ENST00000316673 ZNF316A6NFI3 1004 aaPredicted RBP21.8■■□□□ 1.08
HNF4A-202ENST00000316673 XRN1Q8IZH2 1706 aaKnown RBP21.8■■□□□ 1.08
HNF4A-202ENST00000316673 TECPR2O15040 1411 aa21.79■■□□□ 1.08
HNF4A-202ENST00000316673 PTCH1Q13635 1447 aa21.79■■□□□ 1.08
HNF4A-202ENST00000316673 GPRASP1Q5JY77 1395 aa21.79■■□□□ 1.08
HNF4A-202ENST00000316673 NBPF1Q3BBV0 1214 aa21.77■■□□□ 1.08
HNF4A-202ENST00000316673 SIRT1Q96EB6 747 aa21.77■■□□□ 1.08
HNF4A-202ENST00000316673 KNDC1Q76NI1 1749 aa21.77■■□□□ 1.08
HNF4A-202ENST00000316673 LTBP4Q8N2S1 1624 aa21.76■■□□□ 1.07
HNF4A-202ENST00000316673 STK26Q9P289 416 aa21.76■■□□□ 1.07
HNF4A-202ENST00000316673 STRCP1A6NGW2 1772 aa21.76■■□□□ 1.07
HNF4A-202ENST00000316673 DLC1Q96QB1 1528 aa21.75■■□□□ 1.07
HNF4A-202ENST00000316673 ILDR2Q71H61 639 aa21.75■■□□□ 1.07
HNF4A-202ENST00000316673 PROSER2Q86WR7 435 aaPredicted RBP21.75■■□□□ 1.07
HNF4A-202ENST00000316673 NCOA3Q9Y6Q9 1424 aa21.75■■□□□ 1.07
HNF4A-202ENST00000316673 FAM135BQ49AJ0 1406 aa21.74■■□□□ 1.07
HNF4A-202ENST00000316673 CARD11Q9BXL7 1154 aa21.74■■□□□ 1.07
HNF4A-202ENST00000316673 IQSEC2Q5JU85 1478 aa21.73■■□□□ 1.07
HNF4A-202ENST00000316673 SOCS7O14512 581 aa21.72■■□□□ 1.07
HNF4A-202ENST00000316673 EIF3AQ14152 1382 aaKnown RBP21.72■■□□□ 1.07
HNF4A-202ENST00000316673 LRRC7Q96NW7 1537 aa21.72■■□□□ 1.07
HNF4A-202ENST00000316673 TRAK1Q9UPV9 953 aa21.71■■□□□ 1.07
HNF4A-202ENST00000316673 ROBO2Q9HCK4 1378 aa21.71■■□□□ 1.07
HNF4A-202ENST00000316673 TMEM94Q12767 1356 aa21.7■■□□□ 1.06
HNF4A-202ENST00000316673 POGKQ9P215 609 aa21.69■■□□□ 1.06
HNF4A-202ENST00000316673 ARHGEF28Q8N1W1 1705 aaKnown RBP21.67■■□□□ 1.06
HNF4A-202ENST00000316673 PRAM1Q96QH2 718 aa21.66■■□□□ 1.06
HNF4A-202ENST00000316673 C14orf37Q86TY3 774 aa21.65■■□□□ 1.06
HNF4A-202ENST00000316673 WAPLQ7Z5K2 1190 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms