RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 ARHGAP31Q2M1Z3 1444 aa20.14■□□□□ 0.81
CHFR-202ENST00000315585 SMG6Q86US8 1419 aaKnown RBP20.14■□□□□ 0.81
CHFR-202ENST00000315585 KIF13AQ9H1H9 1805 aa20.14■□□□□ 0.81
CHFR-202ENST00000315585 MYOM2P54296 1465 aa20.13■□□□□ 0.81
CHFR-202ENST00000315585 NBPF1Q3BBV0 1214 aa20.13■□□□□ 0.81
CHFR-202ENST00000315585 PNISRQ8TF01 805 aaKnown RBP20.12■□□□□ 0.81
CHFR-202ENST00000315585 KIAA1210Q9ULL0 1709 aa20.11■□□□□ 0.81
CHFR-202ENST00000315585 PPP6R1Q9UPN7 881 aa20.11■□□□□ 0.81
CHFR-202ENST00000315585 AGLP35573 1532 aa20.1■□□□□ 0.81
CHFR-202ENST00000315585 UGGT1Q9NYU2 1555 aa20.09■□□□□ 0.81
CHFR-202ENST00000315585 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
CHFR-202ENST00000315585 ADGRB3O60242 1522 aa20.09■□□□□ 0.81
CHFR-202ENST00000315585 NOS1P29475 1434 aa20.09■□□□□ 0.81
CHFR-202ENST00000315585 RBM19Q9Y4C8 960 aaKnown RBP20.08■□□□□ 0.8
CHFR-202ENST00000315585 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.8
CHFR-202ENST00000315585 IFT172Q9UG01 1749 aa20.06■□□□□ 0.8
CHFR-202ENST00000315585 NLRP13Q86W25 1043 aa20.06■□□□□ 0.8
CHFR-202ENST00000315585 TMF1P82094 1093 aa20.05■□□□□ 0.8
CHFR-202ENST00000315585 LRPPRCP42704 1394 aaKnown RBP20.05■□□□□ 0.8
CHFR-202ENST00000315585 EIF3AQ14152 1382 aaKnown RBP20.04■□□□□ 0.8
CHFR-202ENST00000315585 IRX6P78412 446 aaPredicted RBP20.04■□□□□ 0.8
CHFR-202ENST00000315585 MROH2AA6NES4 1674 aa20.04■□□□□ 0.8
CHFR-202ENST00000315585 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
CHFR-202ENST00000315585 SLC24A1O60721 1099 aa20.03■□□□□ 0.8
CHFR-202ENST00000315585 CHGAP10645 457 aaKnown RBP20.03■□□□□ 0.8
CHFR-202ENST00000315585 SLC52A1Q9NWF4 448 aa20.03■□□□□ 0.8
CHFR-202ENST00000315585 COL17A1Q9UMD9 1497 aaPredicted RBP20.03■□□□□ 0.8
CHFR-202ENST00000315585 IQGAP1P46940 1657 aa20.03■□□□□ 0.8
CHFR-202ENST00000315585 PIK3C2BO00750 1634 aa20.02■□□□□ 0.8
CHFR-202ENST00000315585 NRXN1Q9ULB1 1477 aa20.02■□□□□ 0.8
CHFR-202ENST00000315585 CNGB1Q14028 1251 aaPredicted RBP20.02■□□□□ 0.79
CHFR-202ENST00000315585 PARD3Q8TEW0 1356 aa20.01■□□□□ 0.79
CHFR-202ENST00000315585 CFAP65Q6ZU64 1925 aaKnown RBP20.01■□□□□ 0.79
CHFR-202ENST00000315585 ARHGEF40Q8TER5 1519 aa20.01■□□□□ 0.79
CHFR-202ENST00000315585 CDCA8Q53HL2 280 aa20.01■□□□□ 0.79
CHFR-202ENST00000315585 INSRP06213 1382 aa20■□□□□ 0.79
CHFR-202ENST00000315585 SIGLEC1Q9BZZ2 1709 aa20■□□□□ 0.79
CHFR-202ENST00000315585 TESK2Q96S53 571 aa20■□□□□ 0.79
CHFR-202ENST00000315585 SYNMO15061 1565 aa19.99■□□□□ 0.79
CHFR-202ENST00000315585 RNF123Q5XPI4 1314 aa19.99■□□□□ 0.79
CHFR-202ENST00000315585 PDE3BQ13370 1112 aa19.98■□□□□ 0.79
CHFR-202ENST00000315585 PPLO60437 1756 aa19.98■□□□□ 0.79
CHFR-202ENST00000315585 ADGRF5Q8IZF2 1346 aa19.97■□□□□ 0.79
CHFR-202ENST00000315585 PER1O15534 1290 aaPredicted RBP19.97■□□□□ 0.79
CHFR-202ENST00000315585 PREX1Q8TCU6 1659 aa19.97■□□□□ 0.79
CHFR-202ENST00000315585 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
CHFR-202ENST00000315585 VGFO15240 615 aaPredicted RBP19.95■□□□□ 0.78
CHFR-202ENST00000315585 ANP32EQ9BTT0 268 aa19.95■□□□□ 0.78
CHFR-202ENST00000315585 CFAP70Q5T0N1 1121 aa19.94■□□□□ 0.78
CHFR-202ENST00000315585 PIK3C2GO75747 1445 aa19.93■□□□□ 0.78
CHFR-202ENST00000315585 DISP3Q9P2K9 1392 aa19.93■□□□□ 0.78
CHFR-202ENST00000315585 FANCIQ9NVI1 1328 aa19.92■□□□□ 0.78
CHFR-202ENST00000315585 IDI1Q13907 227 aa19.92■□□□□ 0.78
CHFR-202ENST00000315585 ERVK-7P63135 1459 aa19.91■□□□□ 0.78
CHFR-202ENST00000315585 C14orf93Q9H972 538 aaKnown RBP19.91■□□□□ 0.78
CHFR-202ENST00000315585 ESF1Q9H501 851 aaKnown RBP19.9■□□□□ 0.78
CHFR-202ENST00000315585 PANK3Q9H999 370 aa19.9■□□□□ 0.78
CHFR-202ENST00000315585 ZFYVE9O95405 1425 aa19.9■□□□□ 0.78
CHFR-202ENST00000315585 CLTCQ00610 1675 aaKnown RBP19.89■□□□□ 0.77
CHFR-202ENST00000315585 NEXMIFQ5QGS0 1516 aa19.89■□□□□ 0.77
CHFR-202ENST00000315585 B4GALNT3Q6L9W6 998 aa19.88■□□□□ 0.77
CHFR-202ENST00000315585 TMEM131LA2VDJ0 1609 aa19.86■□□□□ 0.77
CHFR-202ENST00000315585 MYO3AQ8NEV4 1616 aa19.86■□□□□ 0.77
CHFR-202ENST00000315585 CCDC136Q96JN2 1154 aa19.85■□□□□ 0.77
CHFR-202ENST00000315585 KNSTRNQ9Y448 316 aa19.85■□□□□ 0.77
CHFR-202ENST00000315585 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
CHFR-202ENST00000315585 SPATA31D1Q6ZQQ2 1576 aa19.85■□□□□ 0.77
CHFR-202ENST00000315585 MLECQ14165 292 aa19.84■□□□□ 0.77
CHFR-202ENST00000315585 CC2D1BQ5T0F9 858 aaKnown RBP19.83■□□□□ 0.77
CHFR-202ENST00000315585 FBXO31Q5XUX0 539 aaPredicted RBP19.83■□□□□ 0.76
CHFR-202ENST00000315585 STAG3Q9UJ98 1225 aa19.83■□□□□ 0.76
CHFR-202ENST00000315585 ADGRB1O14514 1584 aa19.82■□□□□ 0.76
CHFR-202ENST00000315585 KDM5AP29375 1690 aaKnown RBP19.81■□□□□ 0.76
CHFR-202ENST00000315585 CENPJQ9HC77 1338 aaPredicted RBP19.81■□□□□ 0.76
CHFR-202ENST00000315585 RCAN3Q9UKA8 241 aa19.8■□□□□ 0.76
CHFR-202ENST00000315585 BLMP54132 1417 aaPredicted RBP19.79■□□□□ 0.76
CHFR-202ENST00000315585 NPC1L1Q9UHC9 1359 aa19.79■□□□□ 0.76
CHFR-202ENST00000315585 ZMYM3Q14202 1370 aa19.78■□□□□ 0.76
CHFR-202ENST00000315585 MYO5BQ9ULV0 1848 aa19.78■□□□□ 0.76
CHFR-202ENST00000315585 RRP1P56182 461 aaKnown RBP19.77■□□□□ 0.76
CHFR-202ENST00000315585 TRAK1Q9UPV9 953 aa19.76■□□□□ 0.75
CHFR-202ENST00000315585 TRHP20396 242 aaPredicted RBP19.74■□□□□ 0.75
CHFR-202ENST00000315585 NUTM2DQ5VT03 806 aaPredicted RBP19.74■□□□□ 0.75
CHFR-202ENST00000315585 WDR43Q15061 677 aaKnown RBP eCLIP19.73■□□□□ 0.75
CHFR-202ENST00000315585 TMEM132EQ6IEE7 984 aa19.73■□□□□ 0.75
CHFR-202ENST00000315585 ERICH6Q7L0X2 663 aa19.73■□□□□ 0.75
CHFR-202ENST00000315585 QRICH2Q9H0J4 1663 aa19.73■□□□□ 0.75
CHFR-202ENST00000315585 A2ML1A8K2U0 1454 aa19.72■□□□□ 0.75
CHFR-202ENST00000315585 ASXL1Q8IXJ9 1541 aa19.72■□□□□ 0.75
CHFR-202ENST00000315585 HDGFP51858 240 aaKnown RBP19.72■□□□□ 0.75
CHFR-202ENST00000315585 PUS7Q96PZ0 661 aaKnown RBP19.72■□□□□ 0.75
CHFR-202ENST00000315585 AMER1Q5JTC6 1135 aaPredicted RBP19.71■□□□□ 0.75
CHFR-202ENST00000315585 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.71■□□□□ 0.75
CHFR-202ENST00000315585 MYOM1P52179 1685 aa19.71■□□□□ 0.75
CHFR-202ENST00000315585 PPP2R1AP30153 589 aa19.7■□□□□ 0.74
CHFR-202ENST00000315585 RIMS2Q9UQ26 1411 aa19.69■□□□□ 0.74
CHFR-202ENST00000315585 ARHGEF28Q8N1W1 1705 aaKnown RBP19.69■□□□□ 0.74
CHFR-202ENST00000315585 TNRQ92752 1358 aa19.69■□□□□ 0.74
CHFR-202ENST00000315585 SALL2Q9Y467 1007 aaPredicted RBP19.67■□□□□ 0.74
CHFR-202ENST00000315585 NGEFQ8N5V2 710 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms