RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 RNF20Q5VTR2 975 aa13.87□□□□□ -0.19
VCPIP1-201ENST00000310421 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
VCPIP1-201ENST00000310421 SMG6Q86US8 1419 aaKnown RBP13.87□□□□□ -0.19
VCPIP1-201ENST00000310421 ZKSCAN2Q63HK3 967 aa13.87□□□□□ -0.19
VCPIP1-201ENST00000310421 LTV1Q96GA3 475 aaPredicted RBP13.86□□□□□ -0.19
VCPIP1-201ENST00000310421 L3MBTL2Q969R5 705 aa13.85□□□□□ -0.19
VCPIP1-201ENST00000310421 PLEKHH2Q8IVE3 1493 aa13.85□□□□□ -0.19
VCPIP1-201ENST00000310421 SETQ01105 290 aaPredicted RBP13.85□□□□□ -0.19
VCPIP1-201ENST00000310421 GPS2Q13227 327 aa13.85□□□□□ -0.19
VCPIP1-201ENST00000310421 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
VCPIP1-201ENST00000310421 CREBRFQ8IUR6 639 aa13.84□□□□□ -0.19
VCPIP1-201ENST00000310421 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
VCPIP1-201ENST00000310421 EHBP1L1Q8N3D4 1523 aa13.84□□□□□ -0.19
VCPIP1-201ENST00000310421 PES1O00541 588 aaKnown RBP13.84□□□□□ -0.19
VCPIP1-201ENST00000310421 GZF1Q9H116 711 aaPredicted RBP13.84□□□□□ -0.19
VCPIP1-201ENST00000310421 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
VCPIP1-201ENST00000310421 TRDNQ13061 729 aa13.84□□□□□ -0.19
VCPIP1-201ENST00000310421 DEKP35659 375 aaKnown RBP13.83□□□□□ -0.19
VCPIP1-201ENST00000310421 CCDC146Q8IYE0 955 aa13.83□□□□□ -0.2
VCPIP1-201ENST00000310421 CCDC43Q96MW1 224 aaKnown RBP13.83□□□□□ -0.2
VCPIP1-201ENST00000310421 SYNJ2O15056 1496 aa13.83□□□□□ -0.2
VCPIP1-201ENST00000310421 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
VCPIP1-201ENST00000310421 HSP90AB4PQ58FF6 505 aa13.83□□□□□ -0.2
VCPIP1-201ENST00000310421 PSME1Q06323 249 aa13.83□□□□□ -0.2
VCPIP1-201ENST00000310421 NINLQ9Y2I6 1382 aa13.82□□□□□ -0.2
VCPIP1-201ENST00000310421 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
VCPIP1-201ENST00000310421 TNNT3P45378 269 aaPredicted RBP13.82□□□□□ -0.2
VCPIP1-201ENST00000310421 ERICH2A1L162 156 aa13.82□□□□□ -0.2
VCPIP1-201ENST00000310421 CPLX1O14810 134 aa13.82□□□□□ -0.2
VCPIP1-201ENST00000310421 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
VCPIP1-201ENST00000310421 DHX57Q6P158 1386 aaKnown RBP13.81□□□□□ -0.2
VCPIP1-201ENST00000310421 BECN2A8MW95 431 aa13.81□□□□□ -0.2
VCPIP1-201ENST00000310421 ERC2O15083 957 aa13.81□□□□□ -0.2
VCPIP1-201ENST00000310421 RBM19Q9Y4C8 960 aaKnown RBP13.81□□□□□ -0.2
VCPIP1-201ENST00000310421 IFIT2P09913 472 aaKnown RBP13.81□□□□□ -0.2
VCPIP1-201ENST00000310421 CUL7Q14999 1698 aa13.81□□□□□ -0.2
VCPIP1-201ENST00000310421 KRI1Q8N9T8 703 aaKnown RBP13.8□□□□□ -0.2
VCPIP1-201ENST00000310421 ATF3P18847 181 aa13.8□□□□□ -0.2
VCPIP1-201ENST00000310421 AEBP2Q6ZN18 517 aaPredicted RBP13.8□□□□□ -0.2
VCPIP1-201ENST00000310421 RILPL2Q969X0 211 aa13.8□□□□□ -0.2
VCPIP1-201ENST00000310421 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
VCPIP1-201ENST00000310421 HMGB2P26583 209 aaKnown RBP13.79□□□□□ -0.2
VCPIP1-201ENST00000310421 PANK3Q9H999 370 aa13.79□□□□□ -0.2
VCPIP1-201ENST00000310421 FAM161AQ3B820 660 aa13.79□□□□□ -0.2
VCPIP1-201ENST00000310421 FGD6Q6ZV73 1430 aa13.79□□□□□ -0.2
VCPIP1-201ENST00000310421 BRMS1Q9HCU9 246 aa13.79□□□□□ -0.2
VCPIP1-201ENST00000310421 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
VCPIP1-201ENST00000310421 NUTM2DQ5VT03 806 aaPredicted RBP13.78□□□□□ -0.2
VCPIP1-201ENST00000310421 MSH5O43196 834 aa13.78□□□□□ -0.2
VCPIP1-201ENST00000310421 CLUAP1Q96AJ1 413 aa13.78□□□□□ -0.2
VCPIP1-201ENST00000310421 MCTP1Q6DN14 999 aa13.78□□□□□ -0.2
VCPIP1-201ENST00000310421 RDXP35241 583 aaKnown RBP13.78□□□□□ -0.2
VCPIP1-201ENST00000310421 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
VCPIP1-201ENST00000310421 G3BP1Q13283 466 aaKnown RBP eCLIP13.77□□□□□ -0.2
VCPIP1-201ENST00000310421 RBM33Q96EV2 1170 aaKnown RBP13.77□□□□□ -0.2
VCPIP1-201ENST00000310421 SAFBQ15424 915 aaKnown RBP eCLIP13.77□□□□□ -0.2
VCPIP1-201ENST00000310421 DIAPH1O60610 1272 aaKnown RBP13.77□□□□□ -0.2
VCPIP1-201ENST00000310421 NOL8Q76FK4 1167 aaKnown RBP13.77□□□□□ -0.2
VCPIP1-201ENST00000310421 GPRASP1Q5JY77 1395 aa13.77□□□□□ -0.21
VCPIP1-201ENST00000310421 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.21
VCPIP1-201ENST00000310421 ANKRD45Q5TZF3 282 aa13.77□□□□□ -0.21
VCPIP1-201ENST00000310421 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
VCPIP1-201ENST00000310421 APPP05067 770 aa13.76□□□□□ -0.21
VCPIP1-201ENST00000310421 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
VCPIP1-201ENST00000310421 CASKIN1Q8WXD9 1431 aa13.75□□□□□ -0.21
VCPIP1-201ENST00000310421 GNAI1P63096 354 aa13.75□□□□□ -0.21
VCPIP1-201ENST00000310421 CNTLNQ9NXG0 1405 aa13.74□□□□□ -0.21
VCPIP1-201ENST00000310421 XBP1P17861 261 aa13.74□□□□□ -0.21
VCPIP1-201ENST00000310421 NAT10Q9H0A0 1025 aaKnown RBP13.74□□□□□ -0.21
VCPIP1-201ENST00000310421 ANO2Q9NQ90 1003 aa13.74□□□□□ -0.21
VCPIP1-201ENST00000310421 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
VCPIP1-201ENST00000310421 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
VCPIP1-201ENST00000310421 NFXL1Q6ZNB6 911 aa13.74□□□□□ -0.21
VCPIP1-201ENST00000310421 PDE4CQ08493 712 aa13.73□□□□□ -0.21
VCPIP1-201ENST00000310421 RAPGEF4Q8WZA2 1011 aa13.73□□□□□ -0.21
VCPIP1-201ENST00000310421 SYTL4Q96C24 671 aaPredicted RBP13.73□□□□□ -0.21
VCPIP1-201ENST00000310421 INTS3Q68E01 1043 aaKnown RBP13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 SLC3A2P08195 630 aaKnown RBP13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 NUTM2FA1L443 756 aa13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 CDR1P51861 262 aa13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 RRP1P56182 461 aaKnown RBP13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 RUNDC1Q96C34 613 aa13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 RALYLQ86SE5 291 aaKnown RBP13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 LRRC9Q6ZRR7 1453 aa13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 SART3Q15020 963 aaKnown RBP13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 KIF14Q15058 1648 aa13.72□□□□□ -0.21
VCPIP1-201ENST00000310421 RAD21O60216 631 aa13.71□□□□□ -0.21
VCPIP1-201ENST00000310421 PCMTD1Q96MG8 357 aaPredicted RBP13.71□□□□□ -0.21
VCPIP1-201ENST00000310421 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
VCPIP1-201ENST00000310421 KIF7Q2M1P5 1343 aa13.71□□□□□ -0.21
VCPIP1-201ENST00000310421 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
VCPIP1-201ENST00000310421 MRC2Q9UBG0 1479 aa13.71□□□□□ -0.21
VCPIP1-201ENST00000310421 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
VCPIP1-201ENST00000310421 EPS15P42566 896 aa13.7□□□□□ -0.22
VCPIP1-201ENST00000310421 FKBP5Q13451 457 aaPredicted RBP13.7□□□□□ -0.22
VCPIP1-201ENST00000310421 MYO6Q9UM54 1294 aa13.7□□□□□ -0.22
VCPIP1-201ENST00000310421 ANKRD50Q9ULJ7 1429 aa13.7□□□□□ -0.22
VCPIP1-201ENST00000310421 R3HCC1Q9Y3T6 440 aaKnown RBP13.7□□□□□ -0.22
VCPIP1-201ENST00000310421 POGZQ7Z3K3 1410 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms