RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 NEURL4Q96JN8 1562 aa7.95□□□□□ -1.14
SEC22A-201ENST00000309934 TULP1O00294 542 aaPredicted RBP7.95□□□□□ -1.14
SEC22A-201ENST00000309934 KDM5CP41229 1560 aa7.95□□□□□ -1.14
SEC22A-201ENST00000309934 SCAF11Q99590 1463 aaKnown RBP7.95□□□□□ -1.14
SEC22A-201ENST00000309934 PTPRTO14522 1441 aa7.95□□□□□ -1.14
SEC22A-201ENST00000309934 SALL2Q9Y467 1007 aaPredicted RBP7.95□□□□□ -1.14
SEC22A-201ENST00000309934 ZC3H13Q5T200 1668 aaKnown RBP7.95□□□□□ -1.14
SEC22A-201ENST00000309934 PRDM15P57071 1507 aaPredicted RBP7.95□□□□□ -1.14
SEC22A-201ENST00000309934 NUDCQ9Y266 331 aa7.95□□□□□ -1.14
SEC22A-201ENST00000309934 CENPJQ9HC77 1338 aaPredicted RBP7.95□□□□□ -1.14
SEC22A-201ENST00000309934 MLECQ14165 292 aa7.94□□□□□ -1.14
SEC22A-201ENST00000309934 AGLP35573 1532 aa7.94□□□□□ -1.14
SEC22A-201ENST00000309934 THEMISQ8N1K5 641 aaPredicted RBP7.94□□□□□ -1.14
SEC22A-201ENST00000309934 PRAG1Q86YV5 1406 aa7.94□□□□□ -1.14
SEC22A-201ENST00000309934 KLHL34Q8N239 644 aa7.93□□□□□ -1.14
SEC22A-201ENST00000309934 ZMYM4Q5VZL5 1548 aa7.93□□□□□ -1.14
SEC22A-201ENST00000309934 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.93□□□□□ -1.14
SEC22A-201ENST00000309934 CGNL1Q0VF96 1302 aa7.93□□□□□ -1.14
SEC22A-201ENST00000309934 MYOM2P54296 1465 aa7.93□□□□□ -1.14
SEC22A-201ENST00000309934 NLRP13Q86W25 1043 aa7.93□□□□□ -1.14
SEC22A-201ENST00000309934 MYBBP1AQ9BQG0 1328 aaKnown RBP7.93□□□□□ -1.14
SEC22A-201ENST00000309934 ST20-MTHFSA0A0A6YYL1 179 aa7.92□□□□□ -1.14
SEC22A-201ENST00000309934 GPRASP1Q5JY77 1395 aa7.92□□□□□ -1.14
SEC22A-201ENST00000309934 EFCAB6Q5THR3 1501 aa7.92□□□□□ -1.14
SEC22A-201ENST00000309934 HNRNPUQ00839 825 aaKnown RBP eCLIP7.91□□□□□ -1.14
SEC22A-201ENST00000309934 RNF17Q9BXT8 1623 aaKnown RBP7.91□□□□□ -1.14
SEC22A-201ENST00000309934 MAP3K4Q9Y6R4 1608 aa7.91□□□□□ -1.14
SEC22A-201ENST00000309934 ATAD2Q6PL18 1390 aa7.91□□□□□ -1.14
SEC22A-201ENST00000309934 REREQ9P2R6 1566 aa7.91□□□□□ -1.14
SEC22A-201ENST00000309934 KIF7Q2M1P5 1343 aa7.91□□□□□ -1.14
SEC22A-201ENST00000309934 PDE3BQ13370 1112 aa7.9□□□□□ -1.14
SEC22A-201ENST00000309934 TNRQ92752 1358 aa7.9□□□□□ -1.14
SEC22A-201ENST00000309934 C14orf37Q86TY3 774 aa7.9□□□□□ -1.14
SEC22A-201ENST00000309934 BRD4O60885 1362 aaPredicted RBP7.9□□□□□ -1.14
SEC22A-201ENST00000309934 DIP2BQ9P265 1576 aa7.9□□□□□ -1.15
SEC22A-201ENST00000309934 KCNA4P22459 653 aa7.9□□□□□ -1.15
SEC22A-201ENST00000309934 ARXQ96QS3 562 aa7.9□□□□□ -1.15
SEC22A-201ENST00000309934 SRPK2P78362 688 aaKnown RBP7.89□□□□□ -1.15
SEC22A-201ENST00000309934 NBPF8Q3BBV2 869 aa7.89□□□□□ -1.15
SEC22A-201ENST00000309934 NBR1Q14596 966 aa7.89□□□□□ -1.15
SEC22A-201ENST00000309934 HOMEZQ8IX15 550 aa7.89□□□□□ -1.15
SEC22A-201ENST00000309934 C14orf93Q9H972 538 aaKnown RBP7.89□□□□□ -1.15
SEC22A-201ENST00000309934 LAMC1P11047 1609 aa7.88□□□□□ -1.15
SEC22A-201ENST00000309934 NSD2O96028 1365 aa7.88□□□□□ -1.15
SEC22A-201ENST00000309934 DEPDC5O75140 1603 aa7.88□□□□□ -1.15
SEC22A-201ENST00000309934 ABCC3O15438 1527 aa7.88□□□□□ -1.15
SEC22A-201ENST00000309934 ZFYVE9O95405 1425 aa7.88□□□□□ -1.15
SEC22A-201ENST00000309934 PRKRIP1Q9H875 184 aaPredicted RBP7.88□□□□□ -1.15
SEC22A-201ENST00000309934 KDM6BO15054 1643 aa7.88□□□□□ -1.15
SEC22A-201ENST00000309934 MORC1Q86VD1 984 aa7.88□□□□□ -1.15
SEC22A-201ENST00000309934 HIRIP3Q9BW71 556 aaPredicted RBP7.88□□□□□ -1.15
SEC22A-201ENST00000309934 KIF1BO60333 1816 aa7.87□□□□□ -1.15
SEC22A-201ENST00000309934 FAM9BQ8IZU0 186 aa7.87□□□□□ -1.15
SEC22A-201ENST00000309934 SPHKAPQ2M3C7 1700 aa7.87□□□□□ -1.15
SEC22A-201ENST00000309934 SBNO2Q9Y2G9 1366 aa7.87□□□□□ -1.15
SEC22A-201ENST00000309934 CALD1Q05682 793 aaKnown RBP7.86□□□□□ -1.15
SEC22A-201ENST00000309934 NLRP1Q9C000 1473 aa7.86□□□□□ -1.15
SEC22A-201ENST00000309934 VWDEQ8N2E2 1590 aa7.86□□□□□ -1.15
SEC22A-201ENST00000309934 DIP2CQ9Y2E4 1556 aa7.86□□□□□ -1.15
SEC22A-201ENST00000309934 NAP1L5Q96NT1 182 aaPredicted RBP7.86□□□□□ -1.15
SEC22A-201ENST00000309934 CHMP4AQ9BY43 222 aa7.86□□□□□ -1.15
SEC22A-201ENST00000309934 SPATA31E1Q6ZUB1 1445 aa7.86□□□□□ -1.15
SEC22A-201ENST00000309934 NOS1P29475 1434 aa7.86□□□□□ -1.15
SEC22A-201ENST00000309934 ARHGEF40Q8TER5 1519 aa7.86□□□□□ -1.15
SEC22A-201ENST00000309934 BCORL1Q5H9F3 1711 aa7.86□□□□□ -1.15
SEC22A-201ENST00000309934 MS4A1P11836 297 aa7.86□□□□□ -1.15
SEC22A-201ENST00000309934 SIRT1Q96EB6 747 aa7.86□□□□□ -1.15
SEC22A-201ENST00000309934 NPATQ14207 1427 aa7.85□□□□□ -1.15
SEC22A-201ENST00000309934 CHMP4BQ9H444 224 aaKnown RBP7.85□□□□□ -1.15
SEC22A-201ENST00000309934 ZNF692Q9BU19 519 aaPredicted RBP7.84□□□□□ -1.15
SEC22A-201ENST00000309934 TRAK1Q9UPV9 953 aa7.84□□□□□ -1.15
SEC22A-201ENST00000309934 KIDINS220Q9ULH0 1771 aa7.84□□□□□ -1.15
SEC22A-201ENST00000309934 INSRP06213 1382 aa7.84□□□□□ -1.15
SEC22A-201ENST00000309934 CFAP70Q5T0N1 1121 aa7.84□□□□□ -1.15
SEC22A-201ENST00000309934 ANKLE2Q86XL3 938 aa7.84□□□□□ -1.15
SEC22A-201ENST00000309934 PANK3Q9H999 370 aa7.84□□□□□ -1.15
SEC22A-201ENST00000309934 ZMYM3Q14202 1370 aa7.84□□□□□ -1.16
SEC22A-201ENST00000309934 NPC1L1Q9UHC9 1359 aa7.84□□□□□ -1.16
SEC22A-201ENST00000309934 MAPK8IP3Q9UPT6 1336 aa7.83□□□□□ -1.16
SEC22A-201ENST00000309934 IDI1Q13907 227 aa7.83□□□□□ -1.16
SEC22A-201ENST00000309934 RIMS2Q9UQ26 1411 aa7.83□□□□□ -1.16
SEC22A-201ENST00000309934 KIAA1210Q9ULL0 1709 aa7.83□□□□□ -1.16
SEC22A-201ENST00000309934 ERVK-7P63135 1459 aa7.83□□□□□ -1.16
SEC22A-201ENST00000309934 CAMSAP1Q5T5Y3 1602 aa7.83□□□□□ -1.16
SEC22A-201ENST00000309934 CNGB1Q14028 1251 aaPredicted RBP7.83□□□□□ -1.16
SEC22A-201ENST00000309934 STK26Q9P289 416 aa7.83□□□□□ -1.16
SEC22A-201ENST00000309934 COL17A1Q9UMD9 1497 aaPredicted RBP7.82□□□□□ -1.16
SEC22A-201ENST00000309934 CEP152O94986 1710 aa7.82□□□□□ -1.16
SEC22A-201ENST00000309934 TXNDC2Q86VQ3 553 aa7.82□□□□□ -1.16
SEC22A-201ENST00000309934 SETBP1Q9Y6X0 1596 aa7.82□□□□□ -1.16
SEC22A-201ENST00000309934 YEATS2Q9ULM3 1422 aa7.82□□□□□ -1.16
SEC22A-201ENST00000309934 ZBED9Q6R2W3 1325 aa7.82□□□□□ -1.16
SEC22A-201ENST00000309934 ABCA6Q8N139 1617 aa7.82□□□□□ -1.16
SEC22A-201ENST00000309934 LMOD3Q0VAK6 560 aa7.82□□□□□ -1.16
SEC22A-201ENST00000309934 ADGRB3O60242 1522 aa7.81□□□□□ -1.16
SEC22A-201ENST00000309934 TAF7LQ5H9L4 462 aa7.81□□□□□ -1.16
SEC22A-201ENST00000309934 E9PCH4 1651 aa7.81□□□□□ -1.16
SEC22A-201ENST00000309934 CC2D1BQ5T0F9 858 aaKnown RBP7.81□□□□□ -1.16
SEC22A-201ENST00000309934 NPM2Q86SE8 214 aaKnown RBP7.81□□□□□ -1.16
SEC22A-201ENST00000309934 BCL11BQ9C0K0 894 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms