RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 TRIM26Q12899 539 aaPredicted RBP29.18■■■□□ 2.26
VEGFB-201ENST00000309422 CLTCL1P53675 1640 aa29.17■■■□□ 2.26
VEGFB-201ENST00000309422 FOXD1Q16676 465 aa29.17■■■□□ 2.26
VEGFB-201ENST00000309422 ZFYVE9O95405 1425 aa29.14■■■□□ 2.26
VEGFB-201ENST00000309422 ZNF335Q9H4Z2 1342 aaPredicted RBP29.13■■■□□ 2.25
VEGFB-201ENST00000309422 CERKQ8TCT0 537 aa29.12■■■□□ 2.25
VEGFB-201ENST00000309422 KIF1BO60333 1816 aa29.11■■■□□ 2.25
VEGFB-201ENST00000309422 PLEKHG1Q9ULL1 1385 aa29.11■■■□□ 2.25
VEGFB-201ENST00000309422 MYO5BQ9ULV0 1848 aa29.09■■■□□ 2.25
VEGFB-201ENST00000309422 CPS1P31327 1500 aa29.08■■■□□ 2.25
VEGFB-201ENST00000309422 NUTM2DQ5VT03 806 aaPredicted RBP29.05■■■□□ 2.24
VEGFB-201ENST00000309422 LTBP4Q8N2S1 1624 aa29.04■■■□□ 2.24
VEGFB-201ENST00000309422 RPGRIP1LQ68CZ1 1315 aa29.03■■■□□ 2.24
VEGFB-201ENST00000309422 SLC26A8Q96RN1 970 aa29.02■■■□□ 2.24
VEGFB-201ENST00000309422 IQSEC2Q5JU85 1478 aa29.02■■■□□ 2.24
VEGFB-201ENST00000309422 SENP3Q9H4L4 574 aaPredicted RBP29.01■■■□□ 2.23
VEGFB-201ENST00000309422 VGFO15240 615 aaPredicted RBP29■■■□□ 2.23
VEGFB-201ENST00000309422 DIP2AQ14689 1571 aa28.99■■■□□ 2.23
VEGFB-201ENST00000309422 NEXMIFQ5QGS0 1516 aa28.98■■■□□ 2.23
VEGFB-201ENST00000309422 RGL3Q3MIN7 710 aa28.96■■■□□ 2.23
VEGFB-201ENST00000309422 FBXO41Q8TF61 875 aa28.95■■■□□ 2.22
VEGFB-201ENST00000309422 TBX22Q9Y458 520 aa28.94■■■□□ 2.22
VEGFB-201ENST00000309422 ANKRD30BQ9BXX2 1392 aa28.93■■■□□ 2.22
VEGFB-201ENST00000309422 KCNA6P17658 529 aa28.91■■■□□ 2.22
VEGFB-201ENST00000309422 PIK3R4Q99570 1358 aa28.91■■■□□ 2.22
VEGFB-201ENST00000309422 SETBP1Q9Y6X0 1596 aa28.91■■■□□ 2.22
VEGFB-201ENST00000309422 SPATA31E1Q6ZUB1 1445 aa28.91■■■□□ 2.22
VEGFB-201ENST00000309422 NKTRP30414 1462 aaKnown RBP28.89■■■□□ 2.21
VEGFB-201ENST00000309422 ADAMTS13Q76LX8 1427 aa28.88■■■□□ 2.21
VEGFB-201ENST00000309422 NWD1Q149M9 1564 aa28.84■■■□□ 2.21
VEGFB-201ENST00000309422 LRRC7Q96NW7 1537 aa28.83■■■□□ 2.21
VEGFB-201ENST00000309422 PPLO60437 1756 aa28.83■■■□□ 2.21
VEGFB-201ENST00000309422 PROSER2Q86WR7 435 aaPredicted RBP28.82■■■□□ 2.2
VEGFB-201ENST00000309422 UBAP1LF5GYI3 381 aa28.81■■■□□ 2.2
VEGFB-201ENST00000309422 ILDR1Q86SU0 546 aaPredicted RBP28.8■■■□□ 2.2
VEGFB-201ENST00000309422 TOM1O60784 492 aa28.79■■■□□ 2.2
VEGFB-201ENST00000309422 NRXN3Q9Y4C0 1643 aa28.77■■■□□ 2.2
VEGFB-201ENST00000309422 C14orf37Q86TY3 774 aa28.77■■■□□ 2.2
VEGFB-201ENST00000309422 TMEM94Q12767 1356 aa28.76■■■□□ 2.19
VEGFB-201ENST00000309422 STRCP1A6NGW2 1772 aa28.76■■■□□ 2.19
VEGFB-201ENST00000309422 MYOM2P54296 1465 aa28.76■■■□□ 2.19
VEGFB-201ENST00000309422 STAC3Q96MF2 364 aa28.75■■■□□ 2.19
VEGFB-201ENST00000309422 AMOTL2Q9Y2J4 779 aa28.75■■■□□ 2.19
VEGFB-201ENST00000309422 SCAF1Q9H7N4 1312 aaKnown RBP28.74■■■□□ 2.19
VEGFB-201ENST00000309422 ADGRF5Q8IZF2 1346 aa28.73■■■□□ 2.19
VEGFB-201ENST00000309422 IFT172Q9UG01 1749 aa28.73■■■□□ 2.19
VEGFB-201ENST00000309422 MSH6P52701 1360 aa28.73■■■□□ 2.19
VEGFB-201ENST00000309422 ALKQ9UM73 1620 aa28.72■■■□□ 2.19
VEGFB-201ENST00000309422 PIK3C2GO75747 1445 aa28.71■■■□□ 2.19
VEGFB-201ENST00000309422 CHD2O14647 1828 aaKnown RBP28.71■■■□□ 2.19
VEGFB-201ENST00000309422 METP08581 1390 aa28.71■■■□□ 2.19
VEGFB-201ENST00000309422 DHX57Q6P158 1386 aaKnown RBP28.71■■■□□ 2.19
VEGFB-201ENST00000309422 PCGF6Q9BYE7 350 aa28.71■■■□□ 2.19
VEGFB-201ENST00000309422 DCAF11Q8TEB1 546 aa28.7■■■□□ 2.18
VEGFB-201ENST00000309422 NCOA3Q9Y6Q9 1424 aa28.68■■■□□ 2.18
VEGFB-201ENST00000309422 KDM2AQ9Y2K7 1162 aa28.66■■■□□ 2.18
VEGFB-201ENST00000309422 PTPRUQ92729 1446 aa28.66■■■□□ 2.18
VEGFB-201ENST00000309422 PIP4K2BP78356 416 aa28.65■■■□□ 2.18
VEGFB-201ENST00000309422 LAMC1P11047 1609 aa28.65■■■□□ 2.18
VEGFB-201ENST00000309422 XRN1Q8IZH2 1706 aaKnown RBP28.64■■■□□ 2.18
VEGFB-201ENST00000309422 RBM33Q96EV2 1170 aaKnown RBP28.63■■■□□ 2.17
VEGFB-201ENST00000309422 NRXN1Q9ULB1 1477 aa28.63■■■□□ 2.17
VEGFB-201ENST00000309422 PTCH1Q13635 1447 aa28.62■■■□□ 2.17
VEGFB-201ENST00000309422 NEUROD1Q13562 356 aa28.61■■■□□ 2.17
VEGFB-201ENST00000309422 ATF3P18847 181 aa28.6■■■□□ 2.17
VEGFB-201ENST00000309422 SETD1AO15047 1707 aaKnown RBP28.59■■■□□ 2.17
VEGFB-201ENST00000309422 C14orf93Q9H972 538 aaKnown RBP28.58■■■□□ 2.17
VEGFB-201ENST00000309422 CADPS2Q86UW7 1296 aa28.57■■■□□ 2.16
VEGFB-201ENST00000309422 C19orf44Q9H6X5 657 aa28.57■■■□□ 2.16
VEGFB-201ENST00000309422 STK26Q9P289 416 aa28.56■■■□□ 2.16
VEGFB-201ENST00000309422 LRPPRCP42704 1394 aaKnown RBP28.56■■■□□ 2.16
VEGFB-201ENST00000309422 CFAP70Q5T0N1 1121 aa28.55■■■□□ 2.16
VEGFB-201ENST00000309422 PRAG1Q86YV5 1406 aa28.55■■■□□ 2.16
VEGFB-201ENST00000309422 SIN3AQ96ST3 1273 aa28.53■■■□□ 2.16
VEGFB-201ENST00000309422 XIRP1Q702N8 1843 aaKnown RBP28.53■■■□□ 2.16
VEGFB-201ENST00000309422 DCCP43146 1447 aa28.52■■■□□ 2.16
VEGFB-201ENST00000309422 YTHDC2Q9H6S0 1430 aaKnown RBP28.52■■■□□ 2.16
VEGFB-201ENST00000309422 TMEM132EQ6IEE7 984 aa28.52■■■□□ 2.16
VEGFB-201ENST00000309422 TONSLQ96HA7 1378 aa28.51■■■□□ 2.15
VEGFB-201ENST00000309422 ADGRL3Q9HAR2 1447 aa28.51■■■□□ 2.15
VEGFB-201ENST00000309422 ROBO2Q9HCK4 1378 aa28.5■■■□□ 2.15
VEGFB-201ENST00000309422 TECPR2O15040 1411 aa28.5■■■□□ 2.15
VEGFB-201ENST00000309422 ABCC11Q96J66 1382 aa28.49■■■□□ 2.15
VEGFB-201ENST00000309422 ASXL1Q8IXJ9 1541 aa28.48■■■□□ 2.15
VEGFB-201ENST00000309422 L3MBTL2Q969R5 705 aa28.46■■■□□ 2.15
VEGFB-201ENST00000309422 KNDC1Q76NI1 1749 aa28.46■■■□□ 2.15
VEGFB-201ENST00000309422 SLAIN2Q9P270 581 aa28.45■■■□□ 2.14
VEGFB-201ENST00000309422 POGKQ9P215 609 aa28.43■■■□□ 2.14
VEGFB-201ENST00000309422 FAM135BQ49AJ0 1406 aa28.42■■■□□ 2.14
VEGFB-201ENST00000309422 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.42■■■□□ 2.14
VEGFB-201ENST00000309422 SIRT1Q96EB6 747 aa28.4■■■□□ 2.14
VEGFB-201ENST00000309422 CLSPNQ9HAW4 1339 aa28.39■■■□□ 2.14
VEGFB-201ENST00000309422 DLC1Q96QB1 1528 aa28.38■■■□□ 2.13
VEGFB-201ENST00000309422 ADGRB1O14514 1584 aa28.38■■■□□ 2.13
VEGFB-201ENST00000309422 NALCNQ8IZF0 1738 aa28.38■■■□□ 2.13
VEGFB-201ENST00000309422 TRAK1Q9UPV9 953 aa28.37■■■□□ 2.13
VEGFB-201ENST00000309422 HSPA1LP34931 641 aa28.37■■■□□ 2.13
VEGFB-201ENST00000309422 KIAA1210Q9ULL0 1709 aa28.36■■■□□ 2.13
VEGFB-201ENST00000309422 WAPLQ7Z5K2 1190 aa28.36■■■□□ 2.13
VEGFB-201ENST00000309422 CCER1Q8TC90 406 aaPredicted RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms