RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 SLC12A5Q9H2X9 1139 aa6.76□□□□□ -1.33
CAST-201ENST00000309190 PZPP20742 1482 aa6.76□□□□□ -1.33
CAST-201ENST00000309190 UTRNP46939 3433 aa6.76□□□□□ -1.33
CAST-201ENST00000309190 IRX6P78412 446 aaPredicted RBP6.75□□□□□ -1.33
CAST-201ENST00000309190 ZNF428Q96B54 188 aa6.75□□□□□ -1.33
CAST-201ENST00000309190 TRPM1Q7Z4N2 1603 aa6.75□□□□□ -1.33
CAST-201ENST00000309190 SOCS7O14512 581 aa6.74□□□□□ -1.33
CAST-201ENST00000309190 PROSER2Q86WR7 435 aaPredicted RBP6.74□□□□□ -1.33
CAST-201ENST00000309190 ZMYM3Q14202 1370 aa6.74□□□□□ -1.33
CAST-201ENST00000309190 ANP32CO43423 234 aa6.74□□□□□ -1.33
CAST-201ENST00000309190 FOXO3O43524 673 aa6.74□□□□□ -1.33
CAST-201ENST00000309190 DHX29Q7Z478 1369 aaKnown RBP6.74□□□□□ -1.33
CAST-201ENST00000309190 UGGT1Q9NYU2 1555 aa6.74□□□□□ -1.33
CAST-201ENST00000309190 NUTM2BA6NNL0 878 aaPredicted RBP6.73□□□□□ -1.33
CAST-201ENST00000309190 NUTM2EB1AL46 878 aaPredicted RBP6.73□□□□□ -1.33
CAST-201ENST00000309190 NUTM2AQ8IVF1 878 aaPredicted RBP6.73□□□□□ -1.33
CAST-201ENST00000309190 MSH5O43196 834 aa6.73□□□□□ -1.33
CAST-201ENST00000309190 ABCC10Q5T3U5 1492 aa6.73□□□□□ -1.33
CAST-201ENST00000309190 RNF123Q5XPI4 1314 aa6.73□□□□□ -1.33
CAST-201ENST00000309190 ROCK1Q13464 1354 aa6.73□□□□□ -1.33
CAST-201ENST00000309190 NGDNQ8NEJ9 315 aaKnown RBP6.73□□□□□ -1.33
CAST-201ENST00000309190 GGNBP2Q9H3C7 697 aa6.73□□□□□ -1.33
CAST-201ENST00000309190 CCDC184Q52MB2 194 aa6.72□□□□□ -1.33
CAST-201ENST00000309190 ESCO1Q5FWF5 840 aa6.72□□□□□ -1.33
CAST-201ENST00000309190 MRS2Q9HD23 443 aa6.72□□□□□ -1.33
CAST-201ENST00000309190 UNC13BO14795 1591 aa6.72□□□□□ -1.33
CAST-201ENST00000309190 CDC42BPBQ9Y5S2 1711 aa6.72□□□□□ -1.33
CAST-201ENST00000309190 A2MP01023 1474 aa6.72□□□□□ -1.33
CAST-201ENST00000309190 CABLES1Q8TDN4 633 aa6.72□□□□□ -1.33
CAST-201ENST00000309190 VGFO15240 615 aaPredicted RBP6.71□□□□□ -1.33
CAST-201ENST00000309190 CFAP44Q96MT7 982 aa6.71□□□□□ -1.33
CAST-201ENST00000309190 PANK3Q9H999 370 aa6.71□□□□□ -1.33
CAST-201ENST00000309190 UHRF1BP1Q6BDS2 1440 aa6.71□□□□□ -1.34
CAST-201ENST00000309190 ERBINQ96RT1 1412 aa6.71□□□□□ -1.34
CAST-201ENST00000309190 U2SURPO15042 1029 aaKnown RBP6.71□□□□□ -1.34
CAST-201ENST00000309190 ZRANB1Q9UGI0 708 aa6.71□□□□□ -1.34
CAST-201ENST00000309190 AMOTL2Q9Y2J4 779 aa6.71□□□□□ -1.34
CAST-201ENST00000309190 ZMYM4Q5VZL5 1548 aa6.71□□□□□ -1.34
CAST-201ENST00000309190 MYOM1P52179 1685 aa6.71□□□□□ -1.34
CAST-201ENST00000309190 KCNA6P17658 529 aa6.71□□□□□ -1.34
CAST-201ENST00000309190 HNRNPUQ00839 825 aaKnown RBP eCLIP6.7□□□□□ -1.34
CAST-201ENST00000309190 ANP32EQ9BTT0 268 aa6.7□□□□□ -1.34
CAST-201ENST00000309190 CNTLNQ9NXG0 1405 aa6.7□□□□□ -1.34
CAST-201ENST00000309190 ERICH6Q7L0X2 663 aa6.7□□□□□ -1.34
CAST-201ENST00000309190 ANKLE2Q86XL3 938 aa6.7□□□□□ -1.34
CAST-201ENST00000309190 THEMISQ8N1K5 641 aaPredicted RBP6.7□□□□□ -1.34
CAST-201ENST00000309190 CABP1Q9NZU7 370 aa6.7□□□□□ -1.34
CAST-201ENST00000309190 MAST1Q9Y2H9 1570 aa6.7□□□□□ -1.34
CAST-201ENST00000309190 FOXD4L1Q9NU39 408 aa6.7□□□□□ -1.34
CAST-201ENST00000309190 SAMD9LQ8IVG5 1584 aa6.7□□□□□ -1.34
CAST-201ENST00000309190 CCDC9Q9Y3X0 531 aaKnown RBP6.7□□□□□ -1.34
CAST-201ENST00000309190 ANKRD30BQ9BXX2 1392 aa6.7□□□□□ -1.34
CAST-201ENST00000309190 ZNF518AQ6AHZ1 1483 aa6.69□□□□□ -1.34
CAST-201ENST00000309190 CCDC146Q8IYE0 955 aa6.69□□□□□ -1.34
CAST-201ENST00000309190 RRP7AQ9Y3A4 280 aaKnown RBP6.69□□□□□ -1.34
CAST-201ENST00000309190 ARHGEF5Q12774 1597 aa6.69□□□□□ -1.34
CAST-201ENST00000309190 MAGI2Q86UL8 1455 aa6.69□□□□□ -1.34
CAST-201ENST00000309190 NOS1P29475 1434 aa6.69□□□□□ -1.34
CAST-201ENST00000309190 WASHC2AQ641Q2 1341 aa6.69□□□□□ -1.34
CAST-201ENST00000309190 ZC3H6P61129 1189 aaKnown RBP6.69□□□□□ -1.34
CAST-201ENST00000309190 KNSTRNQ9Y448 316 aa6.69□□□□□ -1.34
CAST-201ENST00000309190 SHANK2Q9UPX8 1470 aa6.68□□□□□ -1.34
CAST-201ENST00000309190 KAT6BQ8WYB5 2073 aa6.68□□□□□ -1.34
CAST-201ENST00000309190 SHROOM2Q13796 1616 aa6.68□□□□□ -1.34
CAST-201ENST00000309190 IQGAP1P46940 1657 aa6.68□□□□□ -1.34
CAST-201ENST00000309190 ADAMTS2O95450 1211 aa6.68□□□□□ -1.34
CAST-201ENST00000309190 IFT172Q9UG01 1749 aa6.68□□□□□ -1.34
CAST-201ENST00000309190 POGZQ7Z3K3 1410 aa6.68□□□□□ -1.34
CAST-201ENST00000309190 USP47Q96K76 1375 aa6.68□□□□□ -1.34
CAST-201ENST00000309190 ZNF335Q9H4Z2 1342 aaPredicted RBP6.68□□□□□ -1.34
CAST-201ENST00000309190 NPM2Q86SE8 214 aaKnown RBP6.68□□□□□ -1.34
CAST-201ENST00000309190 LAS1LQ9Y4W2 734 aaKnown RBP6.68□□□□□ -1.34
CAST-201ENST00000309190 KIAA1107Q9UPP5 1409 aa6.68□□□□□ -1.34
CAST-201ENST00000309190 ORAI2Q96SN7 254 aa6.67□□□□□ -1.34
CAST-201ENST00000309190 PREX2Q70Z35 1606 aa6.67□□□□□ -1.34
CAST-201ENST00000309190 DISP3Q9P2K9 1392 aa6.67□□□□□ -1.34
CAST-201ENST00000309190 TMF1P82094 1093 aa6.67□□□□□ -1.34
CAST-201ENST00000309190 FANCIQ9NVI1 1328 aa6.67□□□□□ -1.34
CAST-201ENST00000309190 RRS1Q15050 365 aaKnown RBP6.66□□□□□ -1.34
CAST-201ENST00000309190 CDK19Q9BWU1 502 aa6.66□□□□□ -1.34
CAST-201ENST00000309190 PSME1Q06323 249 aa6.66□□□□□ -1.34
CAST-201ENST00000309190 TMEM132AQ24JP5 1023 aa6.66□□□□□ -1.34
CAST-201ENST00000309190 DEPDC5O75140 1603 aa6.66□□□□□ -1.34
CAST-201ENST00000309190 IQGAP3Q86VI3 1631 aa6.66□□□□□ -1.34
CAST-201ENST00000309190 SLC52A1Q9NWF4 448 aa6.66□□□□□ -1.34
CAST-201ENST00000309190 KIF7Q2M1P5 1343 aa6.66□□□□□ -1.34
CAST-201ENST00000309190 PLXNC1O60486 1568 aa6.65□□□□□ -1.34
CAST-201ENST00000309190 TCERG1O14776 1098 aaKnown RBP6.65□□□□□ -1.34
CAST-201ENST00000309190 VSIG10Q8N0Z9 540 aa6.65□□□□□ -1.34
CAST-201ENST00000309190 NPATQ14207 1427 aa6.65□□□□□ -1.34
CAST-201ENST00000309190 TNRQ92752 1358 aa6.65□□□□□ -1.34
CAST-201ENST00000309190 CHRNA2Q15822 529 aa6.65□□□□□ -1.34
CAST-201ENST00000309190 PRDM15P57071 1507 aaPredicted RBP6.65□□□□□ -1.34
CAST-201ENST00000309190 NEURL4Q96JN8 1562 aa6.65□□□□□ -1.35
CAST-201ENST00000309190 UHRF1BP1LA0JNW5 1464 aa6.65□□□□□ -1.35
CAST-201ENST00000309190 RALGAPBQ86X10 1494 aa6.65□□□□□ -1.35
CAST-201ENST00000309190 HDGFP51858 240 aaKnown RBP6.65□□□□□ -1.35
CAST-201ENST00000309190 ATP7AQ04656 1500 aa6.65□□□□□ -1.35
CAST-201ENST00000309190 HMOX1P09601 288 aa6.64□□□□□ -1.35
CAST-201ENST00000309190 PAXIP1Q6ZW49 1069 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms