RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 COL17A1Q9UMD9 1497 aaPredicted RBP11.49□□□□□ -0.57
LCLAT1-201ENST00000309052 NUTM2GQ5VZR2 741 aa11.49□□□□□ -0.57
LCLAT1-201ENST00000309052 EID1Q9Y6B2 187 aa11.49□□□□□ -0.57
LCLAT1-201ENST00000309052 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
LCLAT1-201ENST00000309052 CROCC2H7BZ55 1655 aa11.48□□□□□ -0.57
LCLAT1-201ENST00000309052 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
LCLAT1-201ENST00000309052 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
LCLAT1-201ENST00000309052 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
LCLAT1-201ENST00000309052 NLRP13Q86W25 1043 aa11.46□□□□□ -0.57
LCLAT1-201ENST00000309052 EIF3AQ14152 1382 aaKnown RBP11.46□□□□□ -0.57
LCLAT1-201ENST00000309052 MAST1Q9Y2H9 1570 aa11.46□□□□□ -0.58
LCLAT1-201ENST00000309052 ZMYM3Q14202 1370 aa11.45□□□□□ -0.58
LCLAT1-201ENST00000309052 PRDM15P57071 1507 aaPredicted RBP11.45□□□□□ -0.58
LCLAT1-201ENST00000309052 C14orf93Q9H972 538 aaKnown RBP11.45□□□□□ -0.58
LCLAT1-201ENST00000309052 EVC2Q86UK5 1308 aa11.44□□□□□ -0.58
LCLAT1-201ENST00000309052 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
LCLAT1-201ENST00000309052 ADAMTS8Q9UP79 889 aa11.44□□□□□ -0.58
LCLAT1-201ENST00000309052 NEO1Q92859 1461 aa11.44□□□□□ -0.58
LCLAT1-201ENST00000309052 MYBBP1AQ9BQG0 1328 aaKnown RBP11.44□□□□□ -0.58
LCLAT1-201ENST00000309052 U2AF1L5P0DN76 240 aaPredicted RBP11.44□□□□□ -0.58
LCLAT1-201ENST00000309052 U2AF1Q01081 240 aaKnown RBP eCLIP11.44□□□□□ -0.58
LCLAT1-201ENST00000309052 CDK19Q9BWU1 502 aa11.44□□□□□ -0.58
LCLAT1-201ENST00000309052 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
LCLAT1-201ENST00000309052 RALBP1Q15311 655 aa11.44□□□□□ -0.58
LCLAT1-201ENST00000309052 PELP1Q8IZL8 1130 aaKnown RBP11.43□□□□□ -0.58
LCLAT1-201ENST00000309052 B4GALNT3Q6L9W6 998 aa11.43□□□□□ -0.58
LCLAT1-201ENST00000309052 SPATA31E1Q6ZUB1 1445 aa11.43□□□□□ -0.58
LCLAT1-201ENST00000309052 RALGAPBQ86X10 1494 aa11.43□□□□□ -0.58
LCLAT1-201ENST00000309052 LAS1LQ9Y4W2 734 aaKnown RBP11.42□□□□□ -0.58
LCLAT1-201ENST00000309052 MLH3Q9UHC1 1453 aa11.42□□□□□ -0.58
LCLAT1-201ENST00000309052 APAF1O14727 1248 aa11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 HSPA2P54652 639 aa11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 XPCQ01831 940 aaPredicted RBP11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 KIDINS220Q9ULH0 1771 aa11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 PNISRQ8TF01 805 aaKnown RBP11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 CARD14Q9BXL6 1004 aa11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 PLIN1O60240 522 aa11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 LTKP29376 864 aa11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 PPP2R1AP30153 589 aa11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 MTHFSP49914 203 aa11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 NGDNQ8NEJ9 315 aaKnown RBP11.41□□□□□ -0.58
LCLAT1-201ENST00000309052 HDGFL2Q7Z4V5 671 aaPredicted RBP11.4□□□□□ -0.58
LCLAT1-201ENST00000309052 LTV1Q96GA3 475 aaPredicted RBP11.4□□□□□ -0.58
LCLAT1-201ENST00000309052 HECW2Q9P2P5 1572 aa11.39□□□□□ -0.59
LCLAT1-201ENST00000309052 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
LCLAT1-201ENST00000309052 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
LCLAT1-201ENST00000309052 PER1O15534 1290 aaPredicted RBP11.39□□□□□ -0.59
LCLAT1-201ENST00000309052 CANXP27824 592 aaKnown RBP11.39□□□□□ -0.59
LCLAT1-201ENST00000309052 PLXNC1O60486 1568 aa11.38□□□□□ -0.59
LCLAT1-201ENST00000309052 TERF2IPQ9NYB0 399 aa11.38□□□□□ -0.59
LCLAT1-201ENST00000309052 UHRF1BP1Q6BDS2 1440 aa11.37□□□□□ -0.59
LCLAT1-201ENST00000309052 E9PCH4 1651 aa11.37□□□□□ -0.59
LCLAT1-201ENST00000309052 HMOX1P09601 288 aa11.37□□□□□ -0.59
LCLAT1-201ENST00000309052 SCAF11Q99590 1463 aaKnown RBP11.37□□□□□ -0.59
LCLAT1-201ENST00000309052 CEP152O94986 1710 aa11.37□□□□□ -0.59
LCLAT1-201ENST00000309052 TNRQ92752 1358 aa11.37□□□□□ -0.59
LCLAT1-201ENST00000309052 AMOTL2Q9Y2J4 779 aa11.37□□□□□ -0.59
LCLAT1-201ENST00000309052 CFAP53Q96M91 514 aa11.36□□□□□ -0.59
LCLAT1-201ENST00000309052 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
LCLAT1-201ENST00000309052 THEMISQ8N1K5 641 aaPredicted RBP11.36□□□□□ -0.59
LCLAT1-201ENST00000309052 CLTCL1P53675 1640 aa11.36□□□□□ -0.59
LCLAT1-201ENST00000309052 RPGRIP1LQ68CZ1 1315 aa11.36□□□□□ -0.59
LCLAT1-201ENST00000309052 STAC3Q96MF2 364 aa11.36□□□□□ -0.59
LCLAT1-201ENST00000309052 ABCA6Q8N139 1617 aa11.36□□□□□ -0.59
LCLAT1-201ENST00000309052 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
LCLAT1-201ENST00000309052 NEFMP07197 916 aa11.35□□□□□ -0.59
LCLAT1-201ENST00000309052 FRAT1Q92837 279 aaPredicted RBP11.35□□□□□ -0.59
LCLAT1-201ENST00000309052 KDM5DQ9BY66 1539 aa11.35□□□□□ -0.59
LCLAT1-201ENST00000309052 BCORL1Q5H9F3 1711 aa11.35□□□□□ -0.59
LCLAT1-201ENST00000309052 CGNL1Q0VF96 1302 aa11.35□□□□□ -0.59
LCLAT1-201ENST00000309052 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.35□□□□□ -0.59
LCLAT1-201ENST00000309052 PLEKHH1Q9ULM0 1364 aa11.35□□□□□ -0.59
LCLAT1-201ENST00000309052 NSD3Q9BZ95 1437 aa11.35□□□□□ -0.59
LCLAT1-201ENST00000309052 IQGAP3Q86VI3 1631 aa11.34□□□□□ -0.59
LCLAT1-201ENST00000309052 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
LCLAT1-201ENST00000309052 NME9Q86XW9 330 aa11.34□□□□□ -0.59
LCLAT1-201ENST00000309052 ARAP3Q8WWN8 1544 aa11.34□□□□□ -0.59
LCLAT1-201ENST00000309052 DIP2BQ9P265 1576 aa11.34□□□□□ -0.59
LCLAT1-201ENST00000309052 ABCC3O15438 1527 aa11.34□□□□□ -0.59
LCLAT1-201ENST00000309052 PTPRTO14522 1441 aa11.34□□□□□ -0.59
LCLAT1-201ENST00000309052 INO80Q9ULG1 1556 aaPredicted RBP11.33□□□□□ -0.6
LCLAT1-201ENST00000309052 RIMS2Q9UQ26 1411 aa11.33□□□□□ -0.6
LCLAT1-201ENST00000309052 CCDC136Q96JN2 1154 aa11.33□□□□□ -0.6
LCLAT1-201ENST00000309052 ELL2O00472 640 aaPredicted RBP11.33□□□□□ -0.6
LCLAT1-201ENST00000309052 NUDT16Q96DE0 195 aaKnown RBP11.33□□□□□ -0.6
LCLAT1-201ENST00000309052 UNC13BO14795 1591 aa11.33□□□□□ -0.6
LCLAT1-201ENST00000309052 TCERG1O14776 1098 aaKnown RBP11.33□□□□□ -0.6
LCLAT1-201ENST00000309052 DIP2CQ9Y2E4 1556 aa11.32□□□□□ -0.6
LCLAT1-201ENST00000309052 PPRC1Q5VV67 1664 aaKnown RBP11.31□□□□□ -0.6
LCLAT1-201ENST00000309052 EFCAB6Q5THR3 1501 aa11.31□□□□□ -0.6
LCLAT1-201ENST00000309052 KCNA6P17658 529 aa11.31□□□□□ -0.6
LCLAT1-201ENST00000309052 FRMPD1Q5SYB0 1578 aa11.31□□□□□ -0.6
LCLAT1-201ENST00000309052 TRPM2O94759 1503 aa11.3□□□□□ -0.6
LCLAT1-201ENST00000309052 MAPK8IP3Q9UPT6 1336 aa11.3□□□□□ -0.6
LCLAT1-201ENST00000309052 METP08581 1390 aa11.3□□□□□ -0.6
LCLAT1-201ENST00000309052 ANKLE2Q86XL3 938 aa11.3□□□□□ -0.6
LCLAT1-201ENST00000309052 ESCO1Q5FWF5 840 aa11.3□□□□□ -0.6
LCLAT1-201ENST00000309052 ZBED9Q6R2W3 1325 aa11.3□□□□□ -0.6
LCLAT1-201ENST00000309052 CLUAP1Q96AJ1 413 aa11.3□□□□□ -0.6
LCLAT1-201ENST00000309052 KDM5CP41229 1560 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms