RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 TRMT2AQ8IZ69 625 aaKnown RBP6.9□□□□□ -1.31
USP8-201ENST00000307179 DCAF11Q8TEB1 546 aa6.9□□□□□ -1.31
USP8-201ENST00000307179 STAC3Q96MF2 364 aa6.9□□□□□ -1.31
USP8-201ENST00000307179 CEP152O94986 1710 aa6.89□□□□□ -1.31
USP8-201ENST00000307179 NCBP3Q53F19 620 aaKnown RBP6.89□□□□□ -1.31
USP8-201ENST00000307179 ST20-MTHFSA0A0A6YYL1 179 aa6.89□□□□□ -1.31
USP8-201ENST00000307179 DUSP27Q5VZP5 1158 aa6.89□□□□□ -1.31
USP8-201ENST00000307179 MAP7D2Q96T17 732 aa6.89□□□□□ -1.31
USP8-201ENST00000307179 MADDQ8WXG6 1647 aa6.89□□□□□ -1.31
USP8-201ENST00000307179 TTC37Q6PGP7 1564 aa6.89□□□□□ -1.31
USP8-201ENST00000307179 CDCA8Q53HL2 280 aa6.89□□□□□ -1.31
USP8-201ENST00000307179 PMFBP1Q8TBY8 1022 aa6.88□□□□□ -1.31
USP8-201ENST00000307179 ANTXR1Q9H6X2 564 aa6.88□□□□□ -1.31
USP8-201ENST00000307179 USP32Q8NFA0 1604 aa6.88□□□□□ -1.31
USP8-201ENST00000307179 ABCA8O94911 1581 aa6.88□□□□□ -1.31
USP8-201ENST00000307179 RRAGDQ9NQL2 400 aaPredicted RBP6.88□□□□□ -1.31
USP8-201ENST00000307179 A2MP01023 1474 aa6.88□□□□□ -1.31
USP8-201ENST00000307179 NUP155O75694 1391 aa6.88□□□□□ -1.31
USP8-201ENST00000307179 TMF1P82094 1093 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 USP19O94966 1318 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 YEATS2Q9ULM3 1422 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 E9PSI1 815 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 SLFN5Q08AF3 891 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 WDR43Q15061 677 aaKnown RBP eCLIP6.87□□□□□ -1.31
USP8-201ENST00000307179 POLR3GLQ9BT43 218 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 TDRD9Q8NDG6 1382 aaKnown RBP6.87□□□□□ -1.31
USP8-201ENST00000307179 NCOA3Q9Y6Q9 1424 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 MYO3AQ8NEV4 1616 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 SKOR2Q2VWA4 1001 aaPredicted RBP6.87□□□□□ -1.31
USP8-201ENST00000307179 RSPH4AQ5TD94 716 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 NAP1L5Q96NT1 182 aaPredicted RBP6.87□□□□□ -1.31
USP8-201ENST00000307179 WDR7Q9Y4E6 1490 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 CHMP5Q9NZZ3 219 aa6.87□□□□□ -1.31
USP8-201ENST00000307179 CFDP1Q9UEE9 299 aaPredicted RBP6.87□□□□□ -1.31
USP8-201ENST00000307179 CIZ1Q9ULV3 898 aaPredicted RBP6.87□□□□□ -1.31
USP8-201ENST00000307179 IFT140Q96RY7 1462 aa6.86□□□□□ -1.31
USP8-201ENST00000307179 MTERF4Q7Z6M4 381 aaKnown RBP6.86□□□□□ -1.31
USP8-201ENST00000307179 CDCA7LQ96GN5 454 aa6.86□□□□□ -1.31
USP8-201ENST00000307179 TBC1D32Q96NH3 1257 aa6.86□□□□□ -1.31
USP8-201ENST00000307179 IBTKQ9P2D0 1353 aaPredicted RBP6.86□□□□□ -1.31
USP8-201ENST00000307179 ARHGAP31Q2M1Z3 1444 aa6.86□□□□□ -1.31
USP8-201ENST00000307179 GRIN2AQ12879 1464 aa6.86□□□□□ -1.31
USP8-201ENST00000307179 PDCL3Q9H2J4 239 aa6.86□□□□□ -1.31
USP8-201ENST00000307179 POGKQ9P215 609 aa6.86□□□□□ -1.31
USP8-201ENST00000307179 PLEKHH1Q9ULM0 1364 aa6.86□□□□□ -1.31
USP8-201ENST00000307179 CALD1Q05682 793 aaKnown RBP6.85□□□□□ -1.31
USP8-201ENST00000307179 MCM4P33991 863 aa6.85□□□□□ -1.31
USP8-201ENST00000307179 ADGRL1O94910 1474 aa6.85□□□□□ -1.31
USP8-201ENST00000307179 KANK1Q14678 1352 aa6.84□□□□□ -1.31
USP8-201ENST00000307179 DISP3Q9P2K9 1392 aa6.84□□□□□ -1.31
USP8-201ENST00000307179 PLIN1O60240 522 aa6.84□□□□□ -1.31
USP8-201ENST00000307179 XRCC6P12956 609 aaKnown RBP eCLIP6.84□□□□□ -1.31
USP8-201ENST00000307179 ZNF326Q5BKZ1 582 aaKnown RBP6.84□□□□□ -1.31
USP8-201ENST00000307179 DNAJC5BQ9UF47 199 aa6.84□□□□□ -1.31
USP8-201ENST00000307179 CDC42BPBQ9Y5S2 1711 aa6.84□□□□□ -1.31
USP8-201ENST00000307179 MAGI1Q96QZ7 1491 aaPredicted RBP6.84□□□□□ -1.31
USP8-201ENST00000307179 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
USP8-201ENST00000307179 HS1BP3Q53T59 392 aa6.84□□□□□ -1.31
USP8-201ENST00000307179 CLUAP1Q96AJ1 413 aa6.84□□□□□ -1.31
USP8-201ENST00000307179 MRC2Q9UBG0 1479 aa6.84□□□□□ -1.31
USP8-201ENST00000307179 CARMIL2Q6F5E8 1435 aa6.84□□□□□ -1.32
USP8-201ENST00000307179 SAMD9LQ8IVG5 1584 aa6.84□□□□□ -1.32
USP8-201ENST00000307179 TESK2Q96S53 571 aa6.84□□□□□ -1.32
USP8-201ENST00000307179 ZMYND15Q9H091 742 aa6.84□□□□□ -1.32
USP8-201ENST00000307179 SHPRHQ149N8 1683 aa6.83□□□□□ -1.32
USP8-201ENST00000307179 ESPNB1AK53 854 aa6.83□□□□□ -1.32
USP8-201ENST00000307179 SCAF11Q99590 1463 aaKnown RBP6.83□□□□□ -1.32
USP8-201ENST00000307179 PRG4Q92954 1404 aaPredicted RBP6.83□□□□□ -1.32
USP8-201ENST00000307179 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.83□□□□□ -1.32
USP8-201ENST00000307179 MYH16Q9H6N6 1097 aa6.83□□□□□ -1.32
USP8-201ENST00000307179 CCDC173Q0VFZ6 552 aa6.83□□□□□ -1.32
USP8-201ENST00000307179 C20orf194Q5TEA3 1177 aa6.83□□□□□ -1.32
USP8-201ENST00000307179 VSIG10Q8N0Z9 540 aa6.83□□□□□ -1.32
USP8-201ENST00000307179 TRPM2O94759 1503 aa6.82□□□□□ -1.32
USP8-201ENST00000307179 RTEL1-TNFRSF6BF6WH68 1400 aa6.82□□□□□ -1.32
USP8-201ENST00000307179 PPP2R1AP30153 589 aa6.82□□□□□ -1.32
USP8-201ENST00000307179 TRIM44Q96DX7 344 aaPredicted RBP6.82□□□□□ -1.32
USP8-201ENST00000307179 GRPEL1Q9HAV7 217 aa6.82□□□□□ -1.32
USP8-201ENST00000307179 IQSEC2Q5JU85 1478 aa6.82□□□□□ -1.32
USP8-201ENST00000307179 CT47B1P0C2W7 299 aaPredicted RBP6.82□□□□□ -1.32
USP8-201ENST00000307179 GBP4Q96PP9 640 aa6.82□□□□□ -1.32
USP8-201ENST00000307179 RGS3P49796 1198 aa6.81□□□□□ -1.32
USP8-201ENST00000307179 SNX21Q969T3 373 aa6.81□□□□□ -1.32
USP8-201ENST00000307179 KNSTRNQ9Y448 316 aa6.81□□□□□ -1.32
USP8-201ENST00000307179 KIF16BQ96L93 1317 aa6.81□□□□□ -1.32
USP8-201ENST00000307179 ZNF644Q9H582 1327 aaPredicted RBP6.81□□□□□ -1.32
USP8-201ENST00000307179 PANK3Q9H999 370 aa6.81□□□□□ -1.32
USP8-201ENST00000307179 POLR3AO14802 1390 aaPredicted RBP6.81□□□□□ -1.32
USP8-201ENST00000307179 ZC3H13Q5T200 1668 aaKnown RBP6.81□□□□□ -1.32
USP8-201ENST00000307179 CFAP74Q9C0B2 1584 aa6.81□□□□□ -1.32
USP8-201ENST00000307179 TRAK2O60296 914 aa6.81□□□□□ -1.32
USP8-201ENST00000307179 RWDD1Q9H446 243 aaPredicted RBP6.81□□□□□ -1.32
USP8-201ENST00000307179 ADAMTS8Q9UP79 889 aa6.81□□□□□ -1.32
USP8-201ENST00000307179 ADGRB2O60241 1585 aa6.81□□□□□ -1.32
USP8-201ENST00000307179 TBC1D2Q9BYX2 928 aa6.81□□□□□ -1.32
USP8-201ENST00000307179 INO80Q9ULG1 1556 aaPredicted RBP6.8□□□□□ -1.32
USP8-201ENST00000307179 TSPY4P0CV99 314 aa6.8□□□□□ -1.32
USP8-201ENST00000307179 TSPY10P0CW01 314 aa6.8□□□□□ -1.32
USP8-201ENST00000307179 ANP32BQ92688 251 aaKnown RBP6.8□□□□□ -1.32
USP8-201ENST00000307179 CFAP44Q96MT7 982 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms