RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 ZNF335Q9H4Z2 1342 aaPredicted RBP25.08■■□□□ 1.6
NDUFA3-201ENST00000303553 HRCP23327 699 aa25.07■■□□□ 1.6
NDUFA3-201ENST00000303553 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.07■■□□□ 1.6
NDUFA3-201ENST00000303553 PPP1R15AO75807 674 aaPredicted RBP25.06■■□□□ 1.6
NDUFA3-201ENST00000303553 IQSEC2Q5JU85 1478 aa25.06■■□□□ 1.6
NDUFA3-201ENST00000303553 CPS1P31327 1500 aa25.06■■□□□ 1.6
NDUFA3-201ENST00000303553 PLEKHG1Q9ULL1 1385 aa25.02■■□□□ 1.6
NDUFA3-201ENST00000303553 CCDC144AA2RUR9 1427 aa25.02■■□□□ 1.6
NDUFA3-201ENST00000303553 ZNF326Q5BKZ1 582 aaKnown RBP24.99■■□□□ 1.59
NDUFA3-201ENST00000303553 BCANQ96GW7 911 aa24.99■■□□□ 1.59
NDUFA3-201ENST00000303553 FOXD1Q16676 465 aa24.98■■□□□ 1.59
NDUFA3-201ENST00000303553 FBXO41Q8TF61 875 aa24.98■■□□□ 1.59
NDUFA3-201ENST00000303553 DIP2AQ14689 1571 aa24.97■■□□□ 1.59
NDUFA3-201ENST00000303553 NEXMIFQ5QGS0 1516 aa24.95■■□□□ 1.58
NDUFA3-201ENST00000303553 STRCP1A6NGW2 1772 aa24.93■■□□□ 1.58
NDUFA3-201ENST00000303553 RPGRIP1LQ68CZ1 1315 aa24.91■■□□□ 1.58
NDUFA3-201ENST00000303553 SLC26A8Q96RN1 970 aa24.91■■□□□ 1.58
NDUFA3-201ENST00000303553 SETBP1Q9Y6X0 1596 aa24.9■■□□□ 1.58
NDUFA3-201ENST00000303553 PPLO60437 1756 aa24.9■■□□□ 1.58
NDUFA3-201ENST00000303553 NWD1Q149M9 1564 aa24.89■■□□□ 1.58
NDUFA3-201ENST00000303553 NUTM2DQ5VT03 806 aaPredicted RBP24.89■■□□□ 1.58
NDUFA3-201ENST00000303553 ILDR1Q86SU0 546 aaPredicted RBP24.88■■□□□ 1.57
NDUFA3-201ENST00000303553 TBX22Q9Y458 520 aa24.87■■□□□ 1.57
NDUFA3-201ENST00000303553 NKTRP30414 1462 aaKnown RBP24.87■■□□□ 1.57
NDUFA3-201ENST00000303553 ADAMTS13Q76LX8 1427 aa24.86■■□□□ 1.57
NDUFA3-201ENST00000303553 TRIM26Q12899 539 aaPredicted RBP24.86■■□□□ 1.57
NDUFA3-201ENST00000303553 CHD2O14647 1828 aaKnown RBP24.86■■□□□ 1.57
NDUFA3-201ENST00000303553 SPATA31E1Q6ZUB1 1445 aa24.86■■□□□ 1.57
NDUFA3-201ENST00000303553 PIK3R4Q99570 1358 aa24.85■■□□□ 1.57
NDUFA3-201ENST00000303553 VGFO15240 615 aaPredicted RBP24.85■■□□□ 1.57
NDUFA3-201ENST00000303553 KCNA6P17658 529 aa24.85■■□□□ 1.57
NDUFA3-201ENST00000303553 NRXN3Q9Y4C0 1643 aa24.85■■□□□ 1.57
NDUFA3-201ENST00000303553 LRRC7Q96NW7 1537 aa24.85■■□□□ 1.57
NDUFA3-201ENST00000303553 IFT172Q9UG01 1749 aa24.83■■□□□ 1.57
NDUFA3-201ENST00000303553 SENP3Q9H4L4 574 aaPredicted RBP24.82■■□□□ 1.56
NDUFA3-201ENST00000303553 ANKRD30BQ9BXX2 1392 aa24.81■■□□□ 1.56
NDUFA3-201ENST00000303553 RGL3Q3MIN7 710 aa24.77■■□□□ 1.56
NDUFA3-201ENST00000303553 XIRP1Q702N8 1843 aaKnown RBP24.77■■□□□ 1.56
NDUFA3-201ENST00000303553 UBAP1LF5GYI3 381 aa24.76■■□□□ 1.55
NDUFA3-201ENST00000303553 TOM1O60784 492 aa24.74■■□□□ 1.55
NDUFA3-201ENST00000303553 SETD1AO15047 1707 aaKnown RBP24.73■■□□□ 1.55
NDUFA3-201ENST00000303553 PROSER2Q86WR7 435 aaPredicted RBP24.73■■□□□ 1.55
NDUFA3-201ENST00000303553 XRN1Q8IZH2 1706 aaKnown RBP24.72■■□□□ 1.55
NDUFA3-201ENST00000303553 TMEM94Q12767 1356 aa24.72■■□□□ 1.55
NDUFA3-201ENST00000303553 ALKQ9UM73 1620 aa24.72■■□□□ 1.55
NDUFA3-201ENST00000303553 MYOM2P54296 1465 aa24.71■■□□□ 1.55
NDUFA3-201ENST00000303553 NCOA3Q9Y6Q9 1424 aa24.69■■□□□ 1.54
NDUFA3-201ENST00000303553 METP08581 1390 aa24.68■■□□□ 1.54
NDUFA3-201ENST00000303553 AMOTL2Q9Y2J4 779 aa24.68■■□□□ 1.54
NDUFA3-201ENST00000303553 LAMC1P11047 1609 aa24.68■■□□□ 1.54
NDUFA3-201ENST00000303553 PIK3C2GO75747 1445 aa24.67■■□□□ 1.54
NDUFA3-201ENST00000303553 PTPRUQ92729 1446 aa24.67■■□□□ 1.54
NDUFA3-201ENST00000303553 ADGRF5Q8IZF2 1346 aa24.66■■□□□ 1.54
NDUFA3-201ENST00000303553 MSH6P52701 1360 aa24.66■■□□□ 1.54
NDUFA3-201ENST00000303553 STAC3Q96MF2 364 aa24.64■■□□□ 1.54
NDUFA3-201ENST00000303553 NRXN1Q9ULB1 1477 aa24.64■■□□□ 1.53
NDUFA3-201ENST00000303553 SCAF1Q9H7N4 1312 aaKnown RBP24.61■■□□□ 1.53
NDUFA3-201ENST00000303553 PRAG1Q86YV5 1406 aa24.61■■□□□ 1.53
NDUFA3-201ENST00000303553 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
NDUFA3-201ENST00000303553 C14orf37Q86TY3 774 aa24.6■■□□□ 1.53
NDUFA3-201ENST00000303553 PIP4K2BP78356 416 aa24.59■■□□□ 1.53
NDUFA3-201ENST00000303553 RBM33Q96EV2 1170 aaKnown RBP24.58■■□□□ 1.53
NDUFA3-201ENST00000303553 DHX57Q6P158 1386 aaKnown RBP24.57■■□□□ 1.52
NDUFA3-201ENST00000303553 KNDC1Q76NI1 1749 aa24.56■■□□□ 1.52
NDUFA3-201ENST00000303553 DCAF11Q8TEB1 546 aa24.56■■□□□ 1.52
NDUFA3-201ENST00000303553 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.55■■□□□ 1.52
NDUFA3-201ENST00000303553 DCCP43146 1447 aa24.55■■□□□ 1.52
NDUFA3-201ENST00000303553 C19orf44Q9H6X5 657 aa24.54■■□□□ 1.52
NDUFA3-201ENST00000303553 ASXL1Q8IXJ9 1541 aa24.53■■□□□ 1.52
NDUFA3-201ENST00000303553 C14orf93Q9H972 538 aaKnown RBP24.53■■□□□ 1.52
NDUFA3-201ENST00000303553 CADPS2Q86UW7 1296 aa24.52■■□□□ 1.52
NDUFA3-201ENST00000303553 TECPR2O15040 1411 aa24.52■■□□□ 1.52
NDUFA3-201ENST00000303553 ADGRL3Q9HAR2 1447 aa24.52■■□□□ 1.52
NDUFA3-201ENST00000303553 ATF3P18847 181 aa24.51■■□□□ 1.51
NDUFA3-201ENST00000303553 KDM2AQ9Y2K7 1162 aa24.51■■□□□ 1.51
NDUFA3-201ENST00000303553 NALCNQ8IZF0 1738 aa24.51■■□□□ 1.51
NDUFA3-201ENST00000303553 LRPPRCP42704 1394 aaKnown RBP24.51■■□□□ 1.51
NDUFA3-201ENST00000303553 ROBO2Q9HCK4 1378 aa24.49■■□□□ 1.51
NDUFA3-201ENST00000303553 FAM135BQ49AJ0 1406 aa24.49■■□□□ 1.51
NDUFA3-201ENST00000303553 YTHDC2Q9H6S0 1430 aaKnown RBP24.49■■□□□ 1.51
NDUFA3-201ENST00000303553 ABCC11Q96J66 1382 aa24.48■■□□□ 1.51
NDUFA3-201ENST00000303553 ROBO1Q9Y6N7 1651 aa24.48■■□□□ 1.51
NDUFA3-201ENST00000303553 CFAP70Q5T0N1 1121 aa24.47■■□□□ 1.51
NDUFA3-201ENST00000303553 SLAIN2Q9P270 581 aa24.46■■□□□ 1.51
NDUFA3-201ENST00000303553 KIAA1210Q9ULL0 1709 aa24.45■■□□□ 1.5
NDUFA3-201ENST00000303553 TMEM132EQ6IEE7 984 aa24.45■■□□□ 1.5
NDUFA3-201ENST00000303553 STK26Q9P289 416 aa24.44■■□□□ 1.5
NDUFA3-201ENST00000303553 ADGRB1O14514 1584 aa24.43■■□□□ 1.5
NDUFA3-201ENST00000303553 DLC1Q96QB1 1528 aa24.41■■□□□ 1.5
NDUFA3-201ENST00000303553 HSPA1LP34931 641 aa24.41■■□□□ 1.5
NDUFA3-201ENST00000303553 SIN3AQ96ST3 1273 aa24.41■■□□□ 1.5
NDUFA3-201ENST00000303553 NEUROD1Q13562 356 aa24.4■■□□□ 1.5
NDUFA3-201ENST00000303553 SIRT1Q96EB6 747 aa24.4■■□□□ 1.5
NDUFA3-201ENST00000303553 PCGF6Q9BYE7 350 aa24.4■■□□□ 1.5
NDUFA3-201ENST00000303553 CDC42BPGQ6DT37 1551 aa24.4■■□□□ 1.5
NDUFA3-201ENST00000303553 MST1RQ04912 1400 aa24.37■■□□□ 1.49
NDUFA3-201ENST00000303553 L3MBTL2Q969R5 705 aa24.36■■□□□ 1.49
NDUFA3-201ENST00000303553 PHLPP1O60346 1717 aa24.35■■□□□ 1.49
NDUFA3-201ENST00000303553 WAPLQ7Z5K2 1190 aa24.33■■□□□ 1.49
NDUFA3-201ENST00000303553 TONSLQ96HA7 1378 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms