RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 RIMS2Q9UQ26 1411 aa29.16■■■□□ 2.26
SCAMP3-201ENST00000302631 CCER1Q8TC90 406 aaPredicted RBP29.14■■■□□ 2.26
SCAMP3-201ENST00000302631 LTKP29376 864 aa29.13■■■□□ 2.25
SCAMP3-201ENST00000302631 ANKLE2Q86XL3 938 aa29.13■■■□□ 2.25
SCAMP3-201ENST00000302631 MED14O60244 1454 aa29.13■■■□□ 2.25
SCAMP3-201ENST00000302631 HDGFP51858 240 aaKnown RBP29.12■■■□□ 2.25
SCAMP3-201ENST00000302631 ZNF326Q5BKZ1 582 aaKnown RBP29.12■■■□□ 2.25
SCAMP3-201ENST00000302631 SCAF11Q99590 1463 aaKnown RBP29.12■■■□□ 2.25
SCAMP3-201ENST00000302631 RGL3Q3MIN7 710 aa29.11■■■□□ 2.25
SCAMP3-201ENST00000302631 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.11■■■□□ 2.25
SCAMP3-201ENST00000302631 TXNDC2Q86VQ3 553 aa29.11■■■□□ 2.25
SCAMP3-201ENST00000302631 EID1Q9Y6B2 187 aa29.09■■■□□ 2.25
SCAMP3-201ENST00000302631 NCKAP5LQ9HCH0 1330 aa29.08■■■□□ 2.24
SCAMP3-201ENST00000302631 NEUROD1Q13562 356 aa29.07■■■□□ 2.24
SCAMP3-201ENST00000302631 STAC3Q96MF2 364 aa29.05■■■□□ 2.24
SCAMP3-201ENST00000302631 MYOM2P54296 1465 aa29.04■■■□□ 2.24
SCAMP3-201ENST00000302631 PLEKHG1Q9ULL1 1385 aa29.04■■■□□ 2.24
SCAMP3-201ENST00000302631 VGFO15240 615 aaPredicted RBP29.03■■■□□ 2.24
SCAMP3-201ENST00000302631 NPHP4O75161 1426 aaPredicted RBP29.02■■■□□ 2.24
SCAMP3-201ENST00000302631 NRXN1Q9ULB1 1477 aa29.02■■■□□ 2.24
SCAMP3-201ENST00000302631 IQGAP1P46940 1657 aa29.01■■■□□ 2.24
SCAMP3-201ENST00000302631 NUTM2DQ5VT03 806 aaPredicted RBP29.01■■■□□ 2.23
SCAMP3-201ENST00000302631 L3MBTL2Q969R5 705 aa29■■■□□ 2.23
SCAMP3-201ENST00000302631 SETBP1Q9Y6X0 1596 aa28.99■■■□□ 2.23
SCAMP3-201ENST00000302631 NRXN3Q9Y4C0 1643 aa28.99■■■□□ 2.23
SCAMP3-201ENST00000302631 ADGRF5Q8IZF2 1346 aa28.98■■■□□ 2.23
SCAMP3-201ENST00000302631 PPP1R15AO75807 674 aaPredicted RBP28.97■■■□□ 2.23
SCAMP3-201ENST00000302631 DCAF11Q8TEB1 546 aa28.97■■■□□ 2.23
SCAMP3-201ENST00000302631 TIMELESSQ9UNS1 1208 aa28.97■■■□□ 2.23
SCAMP3-201ENST00000302631 DMRT2Q9Y5R5 561 aa28.96■■■□□ 2.23
SCAMP3-201ENST00000302631 PIK3C2GO75747 1445 aa28.94■■■□□ 2.22
SCAMP3-201ENST00000302631 ADAMTS13Q76LX8 1427 aa28.94■■■□□ 2.22
SCAMP3-201ENST00000302631 TONSLQ96HA7 1378 aa28.94■■■□□ 2.22
SCAMP3-201ENST00000302631 DIP2AQ14689 1571 aa28.91■■■□□ 2.22
SCAMP3-201ENST00000302631 SETD1AO15047 1707 aaKnown RBP28.91■■■□□ 2.22
SCAMP3-201ENST00000302631 KDM2AQ9Y2K7 1162 aa28.9■■■□□ 2.22
SCAMP3-201ENST00000302631 TBX22Q9Y458 520 aa28.9■■■□□ 2.22
SCAMP3-201ENST00000302631 ALKQ9UM73 1620 aa28.88■■■□□ 2.21
SCAMP3-201ENST00000302631 PRAG1Q86YV5 1406 aa28.87■■■□□ 2.21
SCAMP3-201ENST00000302631 C14orf93Q9H972 538 aaKnown RBP28.85■■■□□ 2.21
SCAMP3-201ENST00000302631 LAMC1P11047 1609 aa28.85■■■□□ 2.21
SCAMP3-201ENST00000302631 KIAA1210Q9ULL0 1709 aa28.84■■■□□ 2.21
SCAMP3-201ENST00000302631 SLC26A8Q96RN1 970 aa28.84■■■□□ 2.21
SCAMP3-201ENST00000302631 BCANQ96GW7 911 aa28.82■■■□□ 2.2
SCAMP3-201ENST00000302631 PIK3R4Q99570 1358 aa28.81■■■□□ 2.2
SCAMP3-201ENST00000302631 CHD2O14647 1828 aaKnown RBP28.8■■■□□ 2.2
SCAMP3-201ENST00000302631 SENP3Q9H4L4 574 aaPredicted RBP28.78■■■□□ 2.2
SCAMP3-201ENST00000302631 NBPF8Q3BBV2 869 aa28.77■■■□□ 2.2
SCAMP3-201ENST00000302631 CFAP70Q5T0N1 1121 aa28.77■■■□□ 2.2
SCAMP3-201ENST00000302631 METP08581 1390 aa28.77■■■□□ 2.2
SCAMP3-201ENST00000302631 ASXL1Q8IXJ9 1541 aa28.76■■■□□ 2.2
SCAMP3-201ENST00000302631 TRPM1Q7Z4N2 1603 aa28.75■■■□□ 2.19
SCAMP3-201ENST00000302631 ADGRB1O14514 1584 aa28.75■■■□□ 2.19
SCAMP3-201ENST00000302631 NWD1Q149M9 1564 aa28.75■■■□□ 2.19
SCAMP3-201ENST00000302631 STRCP1A6NGW2 1772 aa28.74■■■□□ 2.19
SCAMP3-201ENST00000302631 PTPRUQ92729 1446 aa28.73■■■□□ 2.19
SCAMP3-201ENST00000302631 KCNA6P17658 529 aa28.71■■■□□ 2.19
SCAMP3-201ENST00000302631 XRN1Q8IZH2 1706 aaKnown RBP28.71■■■□□ 2.19
SCAMP3-201ENST00000302631 ZNF335Q9H4Z2 1342 aaPredicted RBP28.68■■■□□ 2.18
SCAMP3-201ENST00000302631 LTBP4Q8N2S1 1624 aa28.68■■■□□ 2.18
SCAMP3-201ENST00000302631 TMEM132EQ6IEE7 984 aa28.67■■■□□ 2.18
SCAMP3-201ENST00000302631 RALGAPBQ86X10 1494 aa28.66■■■□□ 2.18
SCAMP3-201ENST00000302631 KNDC1Q76NI1 1749 aa28.66■■■□□ 2.18
SCAMP3-201ENST00000302631 NBPF1Q3BBV0 1214 aa28.66■■■□□ 2.18
SCAMP3-201ENST00000302631 LRPPRCP42704 1394 aaKnown RBP28.66■■■□□ 2.18
SCAMP3-201ENST00000302631 GPRASP1Q5JY77 1395 aa28.66■■■□□ 2.18
SCAMP3-201ENST00000302631 YTHDC2Q9H6S0 1430 aaKnown RBP28.65■■■□□ 2.18
SCAMP3-201ENST00000302631 AMOTL2Q9Y2J4 779 aa28.65■■■□□ 2.18
SCAMP3-201ENST00000302631 ABCC11Q96J66 1382 aa28.65■■■□□ 2.18
SCAMP3-201ENST00000302631 TECPR2O15040 1411 aa28.64■■■□□ 2.18
SCAMP3-201ENST00000302631 NKTRP30414 1462 aaKnown RBP28.64■■■□□ 2.18
SCAMP3-201ENST00000302631 CPS1P31327 1500 aa28.62■■■□□ 2.17
SCAMP3-201ENST00000302631 PTCH1Q13635 1447 aa28.6■■■□□ 2.17
SCAMP3-201ENST00000302631 DLC1Q96QB1 1528 aa28.59■■■□□ 2.17
SCAMP3-201ENST00000302631 SIRT1Q96EB6 747 aa28.59■■■□□ 2.17
SCAMP3-201ENST00000302631 ROCK2O75116 1388 aaKnown RBP28.57■■■□□ 2.16
SCAMP3-201ENST00000302631 LRRC7Q96NW7 1537 aa28.55■■■□□ 2.16
SCAMP3-201ENST00000302631 ROBO2Q9HCK4 1378 aa28.55■■■□□ 2.16
SCAMP3-201ENST00000302631 XIRP1Q702N8 1843 aaKnown RBP28.54■■■□□ 2.16
SCAMP3-201ENST00000302631 FAM135BQ49AJ0 1406 aa28.54■■■□□ 2.16
SCAMP3-201ENST00000302631 ARHGEF28Q8N1W1 1705 aaKnown RBP28.54■■■□□ 2.16
SCAMP3-201ENST00000302631 STK26Q9P289 416 aa28.53■■■□□ 2.16
SCAMP3-201ENST00000302631 NCOA3Q9Y6Q9 1424 aa28.52■■■□□ 2.16
SCAMP3-201ENST00000302631 PROSER2Q86WR7 435 aaPredicted RBP28.5■■■□□ 2.15
SCAMP3-201ENST00000302631 TRAK1Q9UPV9 953 aa28.5■■■□□ 2.15
SCAMP3-201ENST00000302631 CARD11Q9BXL7 1154 aa28.49■■■□□ 2.15
SCAMP3-201ENST00000302631 TMEM94Q12767 1356 aa28.47■■■□□ 2.15
SCAMP3-201ENST00000302631 ZEB1P37275 1124 aaPredicted RBP28.46■■■□□ 2.15
SCAMP3-201ENST00000302631 PLEKHH1Q9ULM0 1364 aa28.44■■■□□ 2.14
SCAMP3-201ENST00000302631 IQSEC2Q5JU85 1478 aa28.44■■■□□ 2.14
SCAMP3-201ENST00000302631 WAPLQ7Z5K2 1190 aa28.43■■■□□ 2.14
SCAMP3-201ENST00000302631 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.43■■■□□ 2.14
SCAMP3-201ENST00000302631 PRAM1Q96QH2 718 aa28.43■■■□□ 2.14
SCAMP3-201ENST00000302631 NALCNQ8IZF0 1738 aa28.4■■■□□ 2.14
SCAMP3-201ENST00000302631 RBM33Q96EV2 1170 aaKnown RBP28.39■■■□□ 2.14
SCAMP3-201ENST00000302631 ADGRL3Q9HAR2 1447 aa28.39■■■□□ 2.13
SCAMP3-201ENST00000302631 EIF3AQ14152 1382 aaKnown RBP28.38■■■□□ 2.13
SCAMP3-201ENST00000302631 CERKQ8TCT0 537 aa28.38■■■□□ 2.13
SCAMP3-201ENST00000302631 POGKQ9P215 609 aa28.37■■■□□ 2.13
SCAMP3-201ENST00000302631 CENPJQ9HC77 1338 aaPredicted RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms