RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 RAD21O60216 631 aa16.31■□□□□ 0.2
ABR-202ENST00000302538 NLRP13Q86W25 1043 aa16.31■□□□□ 0.2
ABR-202ENST00000302538 SCAPERQ9BY12 1400 aa16.3■□□□□ 0.2
ABR-202ENST00000302538 NUTM2BA6NNL0 878 aaPredicted RBP16.3■□□□□ 0.2
ABR-202ENST00000302538 NUTM2EB1AL46 878 aaPredicted RBP16.3■□□□□ 0.2
ABR-202ENST00000302538 AMER1Q5JTC6 1135 aaPredicted RBP16.3■□□□□ 0.2
ABR-202ENST00000302538 NUTM2AQ8IVF1 878 aaPredicted RBP16.3■□□□□ 0.2
ABR-202ENST00000302538 STAC3Q96MF2 364 aa16.3■□□□□ 0.2
ABR-202ENST00000302538 EPRSP07814 1512 aaKnown RBP16.3■□□□□ 0.2
ABR-202ENST00000302538 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
ABR-202ENST00000302538 VPS37DQ86XT2 251 aa16.29■□□□□ 0.2
ABR-202ENST00000302538 PIP4K2BP78356 416 aa16.29■□□□□ 0.2
ABR-202ENST00000302538 ESCO1Q5FWF5 840 aa16.29■□□□□ 0.2
ABR-202ENST00000302538 CENPJQ9HC77 1338 aaPredicted RBP16.28■□□□□ 0.2
ABR-202ENST00000302538 AMOTL1Q8IY63 956 aa16.27■□□□□ 0.2
ABR-202ENST00000302538 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
ABR-202ENST00000302538 PPP1R1BQ9UD71 204 aaPredicted RBP16.27■□□□□ 0.2
ABR-202ENST00000302538 PLB1Q6P1J6 1458 aa16.27■□□□□ 0.2
ABR-202ENST00000302538 C9orf84Q5VXU9 1444 aa16.27■□□□□ 0.19
ABR-202ENST00000302538 PMFBP1Q8TBY8 1022 aa16.26■□□□□ 0.19
ABR-202ENST00000302538 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
ABR-202ENST00000302538 C9orf78Q9NZ63 289 aaPredicted RBP16.26■□□□□ 0.19
ABR-202ENST00000302538 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
ABR-202ENST00000302538 NECTIN2Q92692 538 aa16.26■□□□□ 0.19
ABR-202ENST00000302538 THEMISQ8N1K5 641 aaPredicted RBP16.25■□□□□ 0.19
ABR-202ENST00000302538 CDK13Q14004 1512 aaKnown RBP16.25■□□□□ 0.19
ABR-202ENST00000302538 NLRP6P59044 892 aa16.25■□□□□ 0.19
ABR-202ENST00000302538 DRC7Q8IY82 874 aa16.25■□□□□ 0.19
ABR-202ENST00000302538 RBM33Q96EV2 1170 aaKnown RBP16.25■□□□□ 0.19
ABR-202ENST00000302538 CHAF1AQ13111 956 aaPredicted RBP16.25■□□□□ 0.19
ABR-202ENST00000302538 TIAM1Q13009 1591 aa16.25■□□□□ 0.19
ABR-202ENST00000302538 DIAPH1O60610 1272 aaKnown RBP16.25■□□□□ 0.19
ABR-202ENST00000302538 KIAA2012Q0VF49 1180 aa16.24■□□□□ 0.19
ABR-202ENST00000302538 STRN4Q9NRL3 753 aa16.24■□□□□ 0.19
ABR-202ENST00000302538 RRBP1Q9P2E9 1410 aaKnown RBP16.24■□□□□ 0.19
ABR-202ENST00000302538 CCDC34Q96HJ3 373 aa16.24■□□□□ 0.19
ABR-202ENST00000302538 DDX58O95786 925 aaKnown RBP16.23■□□□□ 0.19
ABR-202ENST00000302538 CD109Q6YHK3 1445 aa16.23■□□□□ 0.19
ABR-202ENST00000302538 PRM3Q9NNZ6 103 aa16.22■□□□□ 0.19
ABR-202ENST00000302538 TCEAL9Q9UHQ7 104 aa16.21■□□□□ 0.19
ABR-202ENST00000302538 WASHC2AQ641Q2 1341 aa16.2■□□□□ 0.18
ABR-202ENST00000302538 ABTB2Q8N961 1025 aa16.2■□□□□ 0.18
ABR-202ENST00000302538 NOL8Q76FK4 1167 aaKnown RBP16.2■□□□□ 0.18
ABR-202ENST00000302538 TMEM132EQ6IEE7 984 aa16.19■□□□□ 0.18
ABR-202ENST00000302538 L1TD1Q5T7N2 865 aaKnown RBP16.18■□□□□ 0.18
ABR-202ENST00000302538 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
ABR-202ENST00000302538 LRRFIP1Q32MZ4 808 aaKnown RBP16.18■□□□□ 0.18
ABR-202ENST00000302538 ANKLE2Q86XL3 938 aa16.18■□□□□ 0.18
ABR-202ENST00000302538 GLIPR1L2Q4G1C9 344 aa16.18■□□□□ 0.18
ABR-202ENST00000302538 SUPT6HQ7KZ85 1726 aaKnown RBP16.18■□□□□ 0.18
ABR-202ENST00000302538 AKAP17AQ02040 695 aaKnown RBP16.18■□□□□ 0.18
ABR-202ENST00000302538 POGZQ7Z3K3 1410 aa16.17■□□□□ 0.18
ABR-202ENST00000302538 USP47Q96K76 1375 aa16.17■□□□□ 0.18
ABR-202ENST00000302538 ARHGEF11O15085 1522 aa16.17■□□□□ 0.18
ABR-202ENST00000302538 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
ABR-202ENST00000302538 RILPL2Q969X0 211 aa16.17■□□□□ 0.18
ABR-202ENST00000302538 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
ABR-202ENST00000302538 DHX16O60231 1041 aaKnown RBP16.16■□□□□ 0.18
ABR-202ENST00000302538 MYBBP1AQ9BQG0 1328 aaKnown RBP16.16■□□□□ 0.18
ABR-202ENST00000302538 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
ABR-202ENST00000302538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.16■□□□□ 0.18
ABR-202ENST00000302538 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
ABR-202ENST00000302538 APPP05067 770 aa16.15■□□□□ 0.18
ABR-202ENST00000302538 MAP3K1Q13233 1512 aa16.15■□□□□ 0.18
ABR-202ENST00000302538 SYNE3Q6ZMZ3 975 aa16.15■□□□□ 0.18
ABR-202ENST00000302538 CREBRFQ8IUR6 639 aa16.15■□□□□ 0.18
ABR-202ENST00000302538 DAPK1P53355 1430 aa16.15■□□□□ 0.18
ABR-202ENST00000302538 SLC52A1Q9NWF4 448 aa16.15■□□□□ 0.18
ABR-202ENST00000302538 PCF11O94913 1555 aaKnown RBP16.14■□□□□ 0.17
ABR-202ENST00000302538 RIPK4P57078 832 aa16.14■□□□□ 0.17
ABR-202ENST00000302538 FKBP5Q13451 457 aaPredicted RBP16.14■□□□□ 0.17
ABR-202ENST00000302538 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
ABR-202ENST00000302538 AIMP1Q12904 312 aaKnown RBP16.14■□□□□ 0.17
ABR-202ENST00000302538 KIF3AQ9Y496 699 aa16.14■□□□□ 0.17
ABR-202ENST00000302538 HFM1A2PYH4 1435 aa16.14■□□□□ 0.17
ABR-202ENST00000302538 FAM177BA6PVY3 158 aa16.13■□□□□ 0.17
ABR-202ENST00000302538 GGNBP2Q9H3C7 697 aa16.13■□□□□ 0.17
ABR-202ENST00000302538 HMOX1P09601 288 aa16.13■□□□□ 0.17
ABR-202ENST00000302538 RIC3Q7Z5B4 369 aa16.13■□□□□ 0.17
ABR-202ENST00000302538 PDE4CQ08493 712 aa16.13■□□□□ 0.17
ABR-202ENST00000302538 KIF16BQ96L93 1317 aa16.12■□□□□ 0.17
ABR-202ENST00000302538 TCERG1O14776 1098 aaKnown RBP16.12■□□□□ 0.17
ABR-202ENST00000302538 PDE3BQ13370 1112 aa16.12■□□□□ 0.17
ABR-202ENST00000302538 IFIT2P09913 472 aaKnown RBP16.11■□□□□ 0.17
ABR-202ENST00000302538 TPM4P67936 248 aa16.11■□□□□ 0.17
ABR-202ENST00000302538 G3BP1Q13283 466 aaKnown RBP eCLIP16.11■□□□□ 0.17
ABR-202ENST00000302538 TOM1L2Q6ZVM7 507 aa16.11■□□□□ 0.17
ABR-202ENST00000302538 CCDC141Q6ZP82 1450 aa16.11■□□□□ 0.17
ABR-202ENST00000302538 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
ABR-202ENST00000302538 SF3A1Q15459 793 aaKnown RBP16.1■□□□□ 0.17
ABR-202ENST00000302538 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
ABR-202ENST00000302538 DIAPH3Q9NSV4 1193 aa16.1■□□□□ 0.17
ABR-202ENST00000302538 NOP58Q9Y2X3 529 aaKnown RBP16.1■□□□□ 0.17
ABR-202ENST00000302538 GBP4Q96PP9 640 aa16.1■□□□□ 0.17
ABR-202ENST00000302538 ADGRL1O94910 1474 aa16.09■□□□□ 0.17
ABR-202ENST00000302538 ANKRD45Q5TZF3 282 aa16.09■□□□□ 0.17
ABR-202ENST00000302538 KIF14Q15058 1648 aa16.09■□□□□ 0.17
ABR-202ENST00000302538 E9PSI1 815 aa16.08■□□□□ 0.17
ABR-202ENST00000302538 SLC26A8Q96RN1 970 aa16.08■□□□□ 0.17
ABR-202ENST00000302538 KIAA1107Q9UPP5 1409 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms