RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
COL6A2-201ENST00000300527 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
COL6A2-201ENST00000300527 HSP90AA1P07900 732 aaKnown RBP18.68■□□□□ 0.58
COL6A2-201ENST00000300527 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
COL6A2-201ENST00000300527 MCM4P33991 863 aa18.67■□□□□ 0.58
COL6A2-201ENST00000300527 PKNOX2Q96KN3 472 aa18.67■□□□□ 0.58
COL6A2-201ENST00000300527 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
COL6A2-201ENST00000300527 EIF3AQ14152 1382 aaKnown RBP18.67■□□□□ 0.58
COL6A2-201ENST00000300527 HSP90AA2PQ14568 343 aaPredicted RBP18.66■□□□□ 0.58
COL6A2-201ENST00000300527 NKTRP30414 1462 aaKnown RBP18.66■□□□□ 0.58
COL6A2-201ENST00000300527 TRAK2O60296 914 aa18.66■□□□□ 0.58
COL6A2-201ENST00000300527 RLBP1P12271 317 aa18.66■□□□□ 0.58
COL6A2-201ENST00000300527 MAGI2Q86UL8 1455 aa18.66■□□□□ 0.58
COL6A2-201ENST00000300527 KIAA0556O60303 1618 aa18.65■□□□□ 0.58
COL6A2-201ENST00000300527 A2MP01023 1474 aa18.65■□□□□ 0.58
COL6A2-201ENST00000300527 ADAMTS12P58397 1594 aa18.64■□□□□ 0.57
COL6A2-201ENST00000300527 TBC1D32Q96NH3 1257 aa18.64■□□□□ 0.57
COL6A2-201ENST00000300527 ANTXR1Q9H6X2 564 aa18.64■□□□□ 0.57
COL6A2-201ENST00000300527 E9PCH4 1651 aa18.63■□□□□ 0.57
COL6A2-201ENST00000300527 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
COL6A2-201ENST00000300527 CDCA8Q53HL2 280 aa18.63■□□□□ 0.57
COL6A2-201ENST00000300527 PDE3AQ14432 1141 aa18.63■□□□□ 0.57
COL6A2-201ENST00000300527 PMFBP1Q8TBY8 1022 aa18.63■□□□□ 0.57
COL6A2-201ENST00000300527 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
COL6A2-201ENST00000300527 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
COL6A2-201ENST00000300527 FTSJ3Q8IY81 847 aaKnown RBP18.62■□□□□ 0.57
COL6A2-201ENST00000300527 TRIM44Q96DX7 344 aaPredicted RBP18.62■□□□□ 0.57
COL6A2-201ENST00000300527 SENP3Q9H4L4 574 aaPredicted RBP18.62■□□□□ 0.57
COL6A2-201ENST00000300527 MYH16Q9H6N6 1097 aa18.62■□□□□ 0.57
COL6A2-201ENST00000300527 FAM135AQ9P2D6 1515 aa18.61■□□□□ 0.57
COL6A2-201ENST00000300527 C22orf23Q9BZE7 217 aa18.61■□□□□ 0.57
COL6A2-201ENST00000300527 TARBP1Q13395 1621 aaKnown RBP18.61■□□□□ 0.57
COL6A2-201ENST00000300527 RWDD1Q9H446 243 aaPredicted RBP18.6■□□□□ 0.57
COL6A2-201ENST00000300527 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
COL6A2-201ENST00000300527 HSCBQ8IWL3 235 aa18.59■□□□□ 0.57
COL6A2-201ENST00000300527 TRMT2AQ8IZ69 625 aaKnown RBP18.59■□□□□ 0.57
COL6A2-201ENST00000300527 PBRM1Q86U86 1689 aa18.58■□□□□ 0.57
COL6A2-201ENST00000300527 CHMP5Q9NZZ3 219 aa18.58■□□□□ 0.56
COL6A2-201ENST00000300527 ITSN2Q9NZM3 1697 aa18.58■□□□□ 0.56
COL6A2-201ENST00000300527 GPRASP1Q5JY77 1395 aa18.58■□□□□ 0.56
COL6A2-201ENST00000300527 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
COL6A2-201ENST00000300527 ZMYND15Q9H091 742 aa18.57■□□□□ 0.56
COL6A2-201ENST00000300527 MORC1Q86VD1 984 aa18.56■□□□□ 0.56
COL6A2-201ENST00000300527 PLA2R1Q13018 1463 aa18.56■□□□□ 0.56
COL6A2-201ENST00000300527 TCP11L2Q8N4U5 519 aa18.56■□□□□ 0.56
COL6A2-201ENST00000300527 INSRP06213 1382 aa18.56■□□□□ 0.56
COL6A2-201ENST00000300527 CARMIL2Q6F5E8 1435 aa18.55■□□□□ 0.56
COL6A2-201ENST00000300527 TRPM1Q7Z4N2 1603 aa18.55■□□□□ 0.56
COL6A2-201ENST00000300527 CHGAP10645 457 aaKnown RBP18.55■□□□□ 0.56
COL6A2-201ENST00000300527 GRPEL1Q9HAV7 217 aa18.55■□□□□ 0.56
COL6A2-201ENST00000300527 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
COL6A2-201ENST00000300527 WDR7Q9Y4E6 1490 aa18.54■□□□□ 0.56
COL6A2-201ENST00000300527 HSP90AB1P08238 724 aaKnown RBP18.54■□□□□ 0.56
COL6A2-201ENST00000300527 ITPRIPQ8IWB1 547 aa18.54■□□□□ 0.56
COL6A2-201ENST00000300527 CLCN1P35523 988 aa18.53■□□□□ 0.56
COL6A2-201ENST00000300527 MRE11P49959 708 aa18.53■□□□□ 0.56
COL6A2-201ENST00000300527 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
COL6A2-201ENST00000300527 ESPNB1AK53 854 aa18.52■□□□□ 0.56
COL6A2-201ENST00000300527 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.55
COL6A2-201ENST00000300527 CARD14Q9BXL6 1004 aa18.52■□□□□ 0.55
COL6A2-201ENST00000300527 ARID3AQ99856 593 aa18.51■□□□□ 0.55
COL6A2-201ENST00000300527 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
COL6A2-201ENST00000300527 PTPRGP23470 1445 aa18.51■□□□□ 0.55
COL6A2-201ENST00000300527 FSD2A1L4K1 749 aa18.5■□□□□ 0.55
COL6A2-201ENST00000300527 SMC4Q9NTJ3 1288 aa18.5■□□□□ 0.55
COL6A2-201ENST00000300527 U2AF1L5P0DN76 240 aaPredicted RBP18.49■□□□□ 0.55
COL6A2-201ENST00000300527 U2AF1Q01081 240 aaKnown RBP eCLIP18.49■□□□□ 0.55
COL6A2-201ENST00000300527 ATP10BO94823 1461 aa18.49■□□□□ 0.55
COL6A2-201ENST00000300527 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
COL6A2-201ENST00000300527 CROCC2H7BZ55 1655 aa18.49■□□□□ 0.55
COL6A2-201ENST00000300527 CCDC141Q6ZP82 1450 aa18.48■□□□□ 0.55
COL6A2-201ENST00000300527 PRDM15P57071 1507 aaPredicted RBP18.48■□□□□ 0.55
COL6A2-201ENST00000300527 ASXL1Q8IXJ9 1541 aa18.48■□□□□ 0.55
COL6A2-201ENST00000300527 NCLP19338 710 aaKnown RBP18.48■□□□□ 0.55
COL6A2-201ENST00000300527 LNPKQ9C0E8 428 aa18.47■□□□□ 0.55
COL6A2-201ENST00000300527 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
COL6A2-201ENST00000300527 SHANK2Q9UPX8 1470 aa18.47■□□□□ 0.55
COL6A2-201ENST00000300527 DDX11L8A8MPP1 907 aa18.47■□□□□ 0.55
COL6A2-201ENST00000300527 DZIP1LQ8IYY4 767 aaKnown RBP18.47■□□□□ 0.55
COL6A2-201ENST00000300527 RUNDC1Q96C34 613 aa18.47■□□□□ 0.55
COL6A2-201ENST00000300527 U2SURPO15042 1029 aaKnown RBP18.46■□□□□ 0.55
COL6A2-201ENST00000300527 PIK3C2GO75747 1445 aa18.46■□□□□ 0.55
COL6A2-201ENST00000300527 ZKSCAN2Q63HK3 967 aa18.46■□□□□ 0.54
COL6A2-201ENST00000300527 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
COL6A2-201ENST00000300527 MVPQ14764 893 aaKnown RBP18.45■□□□□ 0.54
COL6A2-201ENST00000300527 GAS2L3Q86XJ1 694 aa18.45■□□□□ 0.54
COL6A2-201ENST00000300527 SLC12A5Q9H2X9 1139 aa18.45■□□□□ 0.54
COL6A2-201ENST00000300527 MTHFSP49914 203 aa18.44■□□□□ 0.54
COL6A2-201ENST00000300527 CDC42BPAQ5VT25 1732 aa18.44■□□□□ 0.54
COL6A2-201ENST00000300527 TNPO1Q92973 898 aaKnown RBP18.44■□□□□ 0.54
COL6A2-201ENST00000300527 TRAK1Q9UPV9 953 aa18.44■□□□□ 0.54
COL6A2-201ENST00000300527 ZBTB7CA1YPR0 619 aa18.43■□□□□ 0.54
COL6A2-201ENST00000300527 ABCC10Q5T3U5 1492 aa18.43■□□□□ 0.54
COL6A2-201ENST00000300527 RRP9O43818 475 aaKnown RBP18.43■□□□□ 0.54
COL6A2-201ENST00000300527 RSPH4AQ5TD94 716 aa18.43■□□□□ 0.54
COL6A2-201ENST00000300527 RBM10P98175 930 aaKnown RBP18.42■□□□□ 0.54
COL6A2-201ENST00000300527 EXOSC9Q06265 439 aaKnown RBP18.41■□□□□ 0.54
COL6A2-201ENST00000300527 GBP4Q96PP9 640 aa18.41■□□□□ 0.54
COL6A2-201ENST00000300527 ADCY10Q96PN6 1610 aa18.41■□□□□ 0.54
COL6A2-201ENST00000300527 ANP32BQ92688 251 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms