RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 LRPPRCP42704 1394 aaKnown RBP20.69■□□□□ 0.9
UBAP1-201ENST00000297661 DISP3Q9P2K9 1392 aa20.69■□□□□ 0.9
UBAP1-201ENST00000297661 NPM2Q86SE8 214 aaKnown RBP20.68■□□□□ 0.9
UBAP1-201ENST00000297661 LAS1LQ9Y4W2 734 aaKnown RBP20.68■□□□□ 0.9
UBAP1-201ENST00000297661 USP35Q9P2H5 1018 aa20.67■□□□□ 0.9
UBAP1-201ENST00000297661 KTN1Q86UP2 1357 aaKnown RBP20.67■□□□□ 0.9
UBAP1-201ENST00000297661 ATP10AO60312 1499 aa20.67■□□□□ 0.9
UBAP1-201ENST00000297661 RTEL1-TNFRSF6BF6WH68 1400 aa20.66■□□□□ 0.9
UBAP1-201ENST00000297661 ARHGEF40Q8TER5 1519 aa20.66■□□□□ 0.9
UBAP1-201ENST00000297661 TRPM1Q7Z4N2 1603 aa20.66■□□□□ 0.9
UBAP1-201ENST00000297661 UBE2Q2Q8WVN8 375 aa20.66■□□□□ 0.9
UBAP1-201ENST00000297661 PER1O15534 1290 aaPredicted RBP20.65■□□□□ 0.9
UBAP1-201ENST00000297661 NLRP13Q86W25 1043 aa20.65■□□□□ 0.9
UBAP1-201ENST00000297661 TESK2Q96S53 571 aa20.65■□□□□ 0.9
UBAP1-201ENST00000297661 PANK3Q9H999 370 aa20.65■□□□□ 0.9
UBAP1-201ENST00000297661 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
UBAP1-201ENST00000297661 MAGI2Q86UL8 1455 aa20.64■□□□□ 0.89
UBAP1-201ENST00000297661 WASHC2CQ9Y4E1 1318 aa20.64■□□□□ 0.89
UBAP1-201ENST00000297661 E9PCH4 1651 aa20.63■□□□□ 0.89
UBAP1-201ENST00000297661 MAST1Q9Y2H9 1570 aa20.62■□□□□ 0.89
UBAP1-201ENST00000297661 PARD3Q8TEW0 1356 aa20.62■□□□□ 0.89
UBAP1-201ENST00000297661 EXOC6Q8TAG9 804 aa20.62■□□□□ 0.89
UBAP1-201ENST00000297661 RRP1P56182 461 aaKnown RBP20.6■□□□□ 0.89
UBAP1-201ENST00000297661 UNC13BO14795 1591 aa20.59■□□□□ 0.89
UBAP1-201ENST00000297661 RCAN3Q9UKA8 241 aa20.59■□□□□ 0.89
UBAP1-201ENST00000297661 PLXNC1O60486 1568 aa20.58■□□□□ 0.89
UBAP1-201ENST00000297661 ERBINQ96RT1 1412 aa20.57■□□□□ 0.88
UBAP1-201ENST00000297661 GPRASP1Q5JY77 1395 aa20.57■□□□□ 0.88
UBAP1-201ENST00000297661 DUOX2Q9NRD8 1548 aa20.56■□□□□ 0.88
UBAP1-201ENST00000297661 PLIN1O60240 522 aa20.56■□□□□ 0.88
UBAP1-201ENST00000297661 PPM1GO15355 546 aaPredicted RBP20.56■□□□□ 0.88
UBAP1-201ENST00000297661 TMF1P82094 1093 aa20.55■□□□□ 0.88
UBAP1-201ENST00000297661 BRPF3Q9ULD4 1205 aa20.55■□□□□ 0.88
UBAP1-201ENST00000297661 CEBPAP49715 358 aaPredicted RBP20.55■□□□□ 0.88
UBAP1-201ENST00000297661 IQGAP3Q86VI3 1631 aa20.54■□□□□ 0.88
UBAP1-201ENST00000297661 PDE4AP27815 886 aa20.54■□□□□ 0.88
UBAP1-201ENST00000297661 TCERG1O14776 1098 aaKnown RBP20.53■□□□□ 0.88
UBAP1-201ENST00000297661 PRDM15P57071 1507 aaPredicted RBP20.53■□□□□ 0.88
UBAP1-201ENST00000297661 ESF1Q9H501 851 aaKnown RBP20.5■□□□□ 0.87
UBAP1-201ENST00000297661 KDM4FA0A1W2PPD8 638 aa20.5■□□□□ 0.87
UBAP1-201ENST00000297661 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
UBAP1-201ENST00000297661 BACH2Q9BYV9 841 aa20.49■□□□□ 0.87
UBAP1-201ENST00000297661 SKAP1Q86WV1 359 aa20.49■□□□□ 0.87
UBAP1-201ENST00000297661 EIF5BO60841 1220 aaKnown RBP20.47■□□□□ 0.87
UBAP1-201ENST00000297661 ADAMTS8Q9UP79 889 aa20.47■□□□□ 0.87
UBAP1-201ENST00000297661 GSE1Q14687 1217 aa20.47■□□□□ 0.87
UBAP1-201ENST00000297661 FBXO31Q5XUX0 539 aaPredicted RBP20.44■□□□□ 0.86
UBAP1-201ENST00000297661 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
UBAP1-201ENST00000297661 KNSTRNQ9Y448 316 aa20.44■□□□□ 0.86
UBAP1-201ENST00000297661 MROH1Q8NDA8 1641 aa20.43■□□□□ 0.86
UBAP1-201ENST00000297661 EIF2AK4Q9P2K8 1649 aaKnown RBP20.43■□□□□ 0.86
UBAP1-201ENST00000297661 MS4A1P11836 297 aa20.42■□□□□ 0.86
UBAP1-201ENST00000297661 MADDQ8WXG6 1647 aa20.42■□□□□ 0.86
UBAP1-201ENST00000297661 AGLP35573 1532 aa20.42■□□□□ 0.86
UBAP1-201ENST00000297661 REREQ9P2R6 1566 aa20.42■□□□□ 0.86
UBAP1-201ENST00000297661 PPP2R1AP30153 589 aa20.41■□□□□ 0.86
UBAP1-201ENST00000297661 CRBNQ96SW2 442 aa20.41■□□□□ 0.86
UBAP1-201ENST00000297661 CEP152O94986 1710 aa20.41■□□□□ 0.86
UBAP1-201ENST00000297661 C20orf194Q5TEA3 1177 aa20.4■□□□□ 0.86
UBAP1-201ENST00000297661 CLTCQ00610 1675 aaKnown RBP20.4■□□□□ 0.86
UBAP1-201ENST00000297661 LAMC1P11047 1609 aa20.4■□□□□ 0.86
UBAP1-201ENST00000297661 BLMP54132 1417 aaPredicted RBP20.4■□□□□ 0.86
UBAP1-201ENST00000297661 KANK1Q14678 1352 aa20.38■□□□□ 0.85
UBAP1-201ENST00000297661 RIMS1Q86UR5 1692 aaKnown RBP20.38■□□□□ 0.85
UBAP1-201ENST00000297661 NFKBIBQ15653 356 aa20.38■□□□□ 0.85
UBAP1-201ENST00000297661 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
UBAP1-201ENST00000297661 AMER1Q5JTC6 1135 aaPredicted RBP20.37■□□□□ 0.85
UBAP1-201ENST00000297661 CCDC146Q8IYE0 955 aa20.37■□□□□ 0.85
UBAP1-201ENST00000297661 DDRGK1Q96HY6 314 aa20.37■□□□□ 0.85
UBAP1-201ENST00000297661 FER1L4A9Z1Z3 1794 aa20.37■□□□□ 0.85
UBAP1-201ENST00000297661 FRAT1Q92837 279 aaPredicted RBP20.37■□□□□ 0.85
UBAP1-201ENST00000297661 ZMYM3Q14202 1370 aa20.37■□□□□ 0.85
UBAP1-201ENST00000297661 CFAP70Q5T0N1 1121 aa20.35■□□□□ 0.85
UBAP1-201ENST00000297661 RNF17Q9BXT8 1623 aaKnown RBP20.35■□□□□ 0.85
UBAP1-201ENST00000297661 PLEKHH1Q9ULM0 1364 aa20.35■□□□□ 0.85
UBAP1-201ENST00000297661 ABCC3O15438 1527 aa20.35■□□□□ 0.85
UBAP1-201ENST00000297661 DEPDC5O75140 1603 aa20.34■□□□□ 0.85
UBAP1-201ENST00000297661 CLTCL1P53675 1640 aa20.33■□□□□ 0.85
UBAP1-201ENST00000297661 ADAMTSL3P82987 1691 aa20.33■□□□□ 0.84
UBAP1-201ENST00000297661 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.84
UBAP1-201ENST00000297661 UGGT1Q9NYU2 1555 aa20.32■□□□□ 0.84
UBAP1-201ENST00000297661 SCAF11Q99590 1463 aaKnown RBP20.31■□□□□ 0.84
UBAP1-201ENST00000297661 TRPM2O94759 1503 aa20.3■□□□□ 0.84
UBAP1-201ENST00000297661 ADGRF5Q8IZF2 1346 aa20.3■□□□□ 0.84
UBAP1-201ENST00000297661 NPATQ14207 1427 aa20.3■□□□□ 0.84
UBAP1-201ENST00000297661 CHGAP10645 457 aaKnown RBP20.29■□□□□ 0.84
UBAP1-201ENST00000297661 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
UBAP1-201ENST00000297661 PTPRMP28827 1452 aa20.29■□□□□ 0.84
UBAP1-201ENST00000297661 IQGAP1P46940 1657 aa20.29■□□□□ 0.84
UBAP1-201ENST00000297661 DUSP27Q5VZP5 1158 aa20.28■□□□□ 0.84
UBAP1-201ENST00000297661 SPHKAPQ2M3C7 1700 aa20.28■□□□□ 0.84
UBAP1-201ENST00000297661 PTPRTO14522 1441 aa20.27■□□□□ 0.84
UBAP1-201ENST00000297661 CDCA8Q53HL2 280 aa20.27■□□□□ 0.84
UBAP1-201ENST00000297661 CAMSAP1Q5T5Y3 1602 aa20.26■□□□□ 0.83
UBAP1-201ENST00000297661 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
UBAP1-201ENST00000297661 VWDEQ8N2E2 1590 aa20.26■□□□□ 0.83
UBAP1-201ENST00000297661 C3P01024 1663 aa20.25■□□□□ 0.83
UBAP1-201ENST00000297661 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
UBAP1-201ENST00000297661 APAF1O14727 1248 aa20.25■□□□□ 0.83
UBAP1-201ENST00000297661 GOLGA2Q08379 1002 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms