RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 CHGAP10645 457 aaKnown RBP24.95■■□□□ 1.58
GABRB1-201ENST00000295454 SCAF11Q99590 1463 aaKnown RBP24.93■■□□□ 1.58
GABRB1-201ENST00000295454 NRXN1Q9ULB1 1477 aa24.93■■□□□ 1.58
GABRB1-201ENST00000295454 STAC3Q96MF2 364 aa24.93■■□□□ 1.58
GABRB1-201ENST00000295454 MRS2Q9HD23 443 aa24.92■■□□□ 1.58
GABRB1-201ENST00000295454 CFAP70Q5T0N1 1121 aa24.92■■□□□ 1.58
GABRB1-201ENST00000295454 PREX1Q8TCU6 1659 aa24.9■■□□□ 1.58
GABRB1-201ENST00000295454 ARHGAP31Q2M1Z3 1444 aa24.89■■□□□ 1.58
GABRB1-201ENST00000295454 MYO5BQ9ULV0 1848 aa24.88■■□□□ 1.57
GABRB1-201ENST00000295454 REREQ9P2R6 1566 aa24.87■■□□□ 1.57
GABRB1-201ENST00000295454 HNRNPUQ00839 825 aaKnown RBP eCLIP24.87■■□□□ 1.57
GABRB1-201ENST00000295454 FAM9BQ8IZU0 186 aa24.86■■□□□ 1.57
GABRB1-201ENST00000295454 TMF1P82094 1093 aa24.85■■□□□ 1.57
GABRB1-201ENST00000295454 NEXMIFQ5QGS0 1516 aa24.83■■□□□ 1.56
GABRB1-201ENST00000295454 PIK3C2GO75747 1445 aa24.82■■□□□ 1.56
GABRB1-201ENST00000295454 CLTCQ00610 1675 aaKnown RBP24.82■■□□□ 1.56
GABRB1-201ENST00000295454 ARHGEF40Q8TER5 1519 aa24.82■■□□□ 1.56
GABRB1-201ENST00000295454 AGLP35573 1532 aa24.82■■□□□ 1.56
GABRB1-201ENST00000295454 MYOM1P52179 1685 aa24.8■■□□□ 1.56
GABRB1-201ENST00000295454 PER1O15534 1290 aaPredicted RBP24.79■■□□□ 1.56
GABRB1-201ENST00000295454 NUTM2DQ5VT03 806 aaPredicted RBP24.79■■□□□ 1.56
GABRB1-201ENST00000295454 IDI1Q13907 227 aa24.79■■□□□ 1.56
GABRB1-201ENST00000295454 SETBP1Q9Y6X0 1596 aa24.79■■□□□ 1.56
GABRB1-201ENST00000295454 MYO3AQ8NEV4 1616 aa24.78■■□□□ 1.56
GABRB1-201ENST00000295454 EIF3AQ14152 1382 aaKnown RBP24.77■■□□□ 1.56
GABRB1-201ENST00000295454 ADGRB1O14514 1584 aa24.77■■□□□ 1.56
GABRB1-201ENST00000295454 FBXO31Q5XUX0 539 aaPredicted RBP24.77■■□□□ 1.56
GABRB1-201ENST00000295454 PANK3Q9H999 370 aa24.77■■□□□ 1.56
GABRB1-201ENST00000295454 TMEM131LA2VDJ0 1609 aa24.77■■□□□ 1.56
GABRB1-201ENST00000295454 KDM5AP29375 1690 aaKnown RBP24.75■■□□□ 1.55
GABRB1-201ENST00000295454 ERVK-7P63135 1459 aa24.74■■□□□ 1.55
GABRB1-201ENST00000295454 RPGRIP1LQ68CZ1 1315 aa24.74■■□□□ 1.55
GABRB1-201ENST00000295454 PARD3Q8TEW0 1356 aa24.73■■□□□ 1.55
GABRB1-201ENST00000295454 MLECQ14165 292 aa24.73■■□□□ 1.55
GABRB1-201ENST00000295454 C14orf93Q9H972 538 aaKnown RBP24.72■■□□□ 1.55
GABRB1-201ENST00000295454 SUPT16HQ9Y5B9 1047 aaKnown RBP24.72■■□□□ 1.55
GABRB1-201ENST00000295454 KTN1Q86UP2 1357 aaKnown RBP24.71■■□□□ 1.55
GABRB1-201ENST00000295454 MYBBP1AQ9BQG0 1328 aaKnown RBP24.71■■□□□ 1.55
GABRB1-201ENST00000295454 RALBP1Q15311 655 aa24.7■■□□□ 1.54
GABRB1-201ENST00000295454 TMEM132EQ6IEE7 984 aa24.7■■□□□ 1.54
GABRB1-201ENST00000295454 QRICH2Q9H0J4 1663 aa24.7■■□□□ 1.54
GABRB1-201ENST00000295454 SLC52A1Q9NWF4 448 aa24.68■■□□□ 1.54
GABRB1-201ENST00000295454 CC2D1BQ5T0F9 858 aaKnown RBP24.68■■□□□ 1.54
GABRB1-201ENST00000295454 SENP3Q9H4L4 574 aaPredicted RBP24.68■■□□□ 1.54
GABRB1-201ENST00000295454 TRAK1Q9UPV9 953 aa24.67■■□□□ 1.54
GABRB1-201ENST00000295454 PNISRQ8TF01 805 aaKnown RBP24.65■■□□□ 1.54
GABRB1-201ENST00000295454 ARHGEF28Q8N1W1 1705 aaKnown RBP24.65■■□□□ 1.54
GABRB1-201ENST00000295454 TMC1Q8TDI8 760 aa24.65■■□□□ 1.54
GABRB1-201ENST00000295454 BRD4O60885 1362 aaPredicted RBP24.65■■□□□ 1.54
GABRB1-201ENST00000295454 ASXL1Q8IXJ9 1541 aa24.65■■□□□ 1.54
GABRB1-201ENST00000295454 SPATA31D1Q6ZQQ2 1576 aa24.64■■□□□ 1.54
GABRB1-201ENST00000295454 CENPJQ9HC77 1338 aaPredicted RBP24.62■■□□□ 1.53
GABRB1-201ENST00000295454 SENP3-EIF4A1A0A087X0R7 540 aa24.62■■□□□ 1.53
GABRB1-201ENST00000295454 VGFO15240 615 aaPredicted RBP24.62■■□□□ 1.53
GABRB1-201ENST00000295454 CDCA8Q53HL2 280 aa24.62■■□□□ 1.53
GABRB1-201ENST00000295454 ZBED9Q6R2W3 1325 aa24.61■■□□□ 1.53
GABRB1-201ENST00000295454 ZFYVE9O95405 1425 aa24.6■■□□□ 1.53
GABRB1-201ENST00000295454 SBNO2Q9Y2G9 1366 aa24.6■■□□□ 1.53
GABRB1-201ENST00000295454 PPP6R1Q9UPN7 881 aa24.59■■□□□ 1.53
GABRB1-201ENST00000295454 LRPPRCP42704 1394 aaKnown RBP24.59■■□□□ 1.53
GABRB1-201ENST00000295454 NLRP13Q86W25 1043 aa24.58■■□□□ 1.52
GABRB1-201ENST00000295454 FKBP8Q14318 412 aa24.56■■□□□ 1.52
GABRB1-201ENST00000295454 AMER1Q5JTC6 1135 aaPredicted RBP24.55■■□□□ 1.52
GABRB1-201ENST00000295454 A2ML1A8K2U0 1454 aa24.54■■□□□ 1.52
GABRB1-201ENST00000295454 KNSTRNQ9Y448 316 aa24.53■■□□□ 1.52
GABRB1-201ENST00000295454 TULP4Q9NRJ4 1543 aa24.52■■□□□ 1.52
GABRB1-201ENST00000295454 ZMYM3Q14202 1370 aa24.51■■□□□ 1.51
GABRB1-201ENST00000295454 BCANQ96GW7 911 aa24.5■■□□□ 1.51
GABRB1-201ENST00000295454 STAG3Q9UJ98 1225 aa24.5■■□□□ 1.51
GABRB1-201ENST00000295454 ALKQ9UM73 1620 aa24.5■■□□□ 1.51
GABRB1-201ENST00000295454 CARD14Q9BXL6 1004 aa24.49■■□□□ 1.51
GABRB1-201ENST00000295454 STK26Q9P289 416 aa24.48■■□□□ 1.51
GABRB1-201ENST00000295454 SLC24A1O60721 1099 aa24.47■■□□□ 1.51
GABRB1-201ENST00000295454 SETD1AO15047 1707 aaKnown RBP24.47■■□□□ 1.51
GABRB1-201ENST00000295454 PTPRMP28827 1452 aa24.46■■□□□ 1.51
GABRB1-201ENST00000295454 SAFB2Q14151 953 aaKnown RBP eCLIP24.46■■□□□ 1.51
GABRB1-201ENST00000295454 RIMS2Q9UQ26 1411 aa24.45■■□□□ 1.51
GABRB1-201ENST00000295454 PPP2R1AP30153 589 aa24.44■■□□□ 1.5
GABRB1-201ENST00000295454 ESF1Q9H501 851 aaKnown RBP24.44■■□□□ 1.5
GABRB1-201ENST00000295454 NEFLP07196 543 aa24.44■■□□□ 1.5
GABRB1-201ENST00000295454 YTHDC2Q9H6S0 1430 aaKnown RBP24.43■■□□□ 1.5
GABRB1-201ENST00000295454 NPC1L1Q9UHC9 1359 aa24.42■■□□□ 1.5
GABRB1-201ENST00000295454 NRXN3Q9Y4C0 1643 aa24.42■■□□□ 1.5
GABRB1-201ENST00000295454 SLC12A5Q9H2X9 1139 aa24.41■■□□□ 1.5
GABRB1-201ENST00000295454 IRX6P78412 446 aaPredicted RBP24.4■■□□□ 1.5
GABRB1-201ENST00000295454 NSD3Q9BZ95 1437 aa24.38■■□□□ 1.49
GABRB1-201ENST00000295454 UBR1Q8IWV7 1749 aa24.38■■□□□ 1.49
GABRB1-201ENST00000295454 TNRQ92752 1358 aa24.38■■□□□ 1.49
GABRB1-201ENST00000295454 SMG6Q86US8 1419 aaKnown RBP24.38■■□□□ 1.49
GABRB1-201ENST00000295454 BLMP54132 1417 aaPredicted RBP24.37■■□□□ 1.49
GABRB1-201ENST00000295454 CABP2Q9NPB3 220 aa24.37■■□□□ 1.49
GABRB1-201ENST00000295454 EVC2Q86UK5 1308 aa24.36■■□□□ 1.49
GABRB1-201ENST00000295454 TRHP20396 242 aaPredicted RBP24.36■■□□□ 1.49
GABRB1-201ENST00000295454 PRAM1Q96QH2 718 aa24.35■■□□□ 1.49
GABRB1-201ENST00000295454 SALL2Q9Y467 1007 aaPredicted RBP24.34■■□□□ 1.49
GABRB1-201ENST00000295454 MINK1Q8N4C8 1332 aaPredicted RBP24.34■■□□□ 1.49
GABRB1-201ENST00000295454 C3P01024 1663 aa24.32■■□□□ 1.48
GABRB1-201ENST00000295454 USP32Q8NFA0 1604 aa24.32■■□□□ 1.48
GABRB1-201ENST00000295454 NUDCQ9Y266 331 aa24.32■■□□□ 1.48
GABRB1-201ENST00000295454 FER1L4A9Z1Z3 1794 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms