RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 ZFYVE9O95405 1425 aa22.98■■□□□ 1.27
MRPL55-201ENST00000295008 RIMS2Q9UQ26 1411 aa22.98■■□□□ 1.27
MRPL55-201ENST00000295008 L3MBTL2Q969R5 705 aa22.97■■□□□ 1.27
MRPL55-201ENST00000295008 THEMISQ8N1K5 641 aaPredicted RBP22.96■■□□□ 1.27
MRPL55-201ENST00000295008 MYOM2P54296 1465 aa22.95■■□□□ 1.26
MRPL55-201ENST00000295008 RPGRIP1LQ68CZ1 1315 aa22.95■■□□□ 1.26
MRPL55-201ENST00000295008 DCAF11Q8TEB1 546 aa22.92■■□□□ 1.26
MRPL55-201ENST00000295008 TIMELESSQ9UNS1 1208 aa22.92■■□□□ 1.26
MRPL55-201ENST00000295008 POLR1AO95602 1720 aaPredicted RBP22.91■■□□□ 1.26
MRPL55-201ENST00000295008 NUTM2DQ5VT03 806 aaPredicted RBP22.89■■□□□ 1.25
MRPL55-201ENST00000295008 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.25
MRPL55-201ENST00000295008 SCAF11Q99590 1463 aaKnown RBP22.89■■□□□ 1.25
MRPL55-201ENST00000295008 NRXN1Q9ULB1 1477 aa22.88■■□□□ 1.25
MRPL55-201ENST00000295008 HSPA2P54652 639 aa22.87■■□□□ 1.25
MRPL55-201ENST00000295008 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.87■■□□□ 1.25
MRPL55-201ENST00000295008 ADGRF5Q8IZF2 1346 aa22.86■■□□□ 1.25
MRPL55-201ENST00000295008 PRAG1Q86YV5 1406 aa22.86■■□□□ 1.25
MRPL55-201ENST00000295008 PPP1R15AO75807 674 aaPredicted RBP22.86■■□□□ 1.25
MRPL55-201ENST00000295008 LTKP29376 864 aa22.86■■□□□ 1.25
MRPL55-201ENST00000295008 TXNDC2Q86VQ3 553 aa22.85■■□□□ 1.25
MRPL55-201ENST00000295008 EID1Q9Y6B2 187 aa22.85■■□□□ 1.25
MRPL55-201ENST00000295008 IQGAP1P46940 1657 aa22.84■■□□□ 1.25
MRPL55-201ENST00000295008 PIK3C2GO75747 1445 aa22.84■■□□□ 1.25
MRPL55-201ENST00000295008 NRXN3Q9Y4C0 1643 aa22.84■■□□□ 1.25
MRPL55-201ENST00000295008 VGFO15240 615 aaPredicted RBP22.84■■□□□ 1.25
MRPL55-201ENST00000295008 HDGFP51858 240 aaKnown RBP22.84■■□□□ 1.25
MRPL55-201ENST00000295008 STAC3Q96MF2 364 aa22.84■■□□□ 1.25
MRPL55-201ENST00000295008 SETBP1Q9Y6X0 1596 aa22.83■■□□□ 1.25
MRPL55-201ENST00000295008 PLEKHG1Q9ULL1 1385 aa22.82■■□□□ 1.24
MRPL55-201ENST00000295008 ANKLE2Q86XL3 938 aa22.82■■□□□ 1.24
MRPL55-201ENST00000295008 TRPM1Q7Z4N2 1603 aa22.81■■□□□ 1.24
MRPL55-201ENST00000295008 STRCQ7RTU9 1775 aa22.81■■□□□ 1.24
MRPL55-201ENST00000295008 LAMC1P11047 1609 aa22.8■■□□□ 1.24
MRPL55-201ENST00000295008 ZEB1P37275 1124 aaPredicted RBP22.8■■□□□ 1.24
MRPL55-201ENST00000295008 NCKAP5LQ9HCH0 1330 aa22.8■■□□□ 1.24
MRPL55-201ENST00000295008 MED14O60244 1454 aa22.79■■□□□ 1.24
MRPL55-201ENST00000295008 NBPF8Q3BBV2 869 aa22.79■■□□□ 1.24
MRPL55-201ENST00000295008 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
MRPL55-201ENST00000295008 SETD1AO15047 1707 aaKnown RBP22.78■■□□□ 1.24
MRPL55-201ENST00000295008 NPHP4O75161 1426 aaPredicted RBP22.78■■□□□ 1.24
MRPL55-201ENST00000295008 KIAA1210Q9ULL0 1709 aa22.78■■□□□ 1.24
MRPL55-201ENST00000295008 ALKQ9UM73 1620 aa22.77■■□□□ 1.24
MRPL55-201ENST00000295008 DIP2AQ14689 1571 aa22.76■■□□□ 1.23
MRPL55-201ENST00000295008 ADAMTS13Q76LX8 1427 aa22.75■■□□□ 1.23
MRPL55-201ENST00000295008 RALGAPBQ86X10 1494 aa22.75■■□□□ 1.23
MRPL55-201ENST00000295008 ASXL1Q8IXJ9 1541 aa22.73■■□□□ 1.23
MRPL55-201ENST00000295008 BCANQ96GW7 911 aa22.73■■□□□ 1.23
MRPL55-201ENST00000295008 CFAP70Q5T0N1 1121 aa22.72■■□□□ 1.23
MRPL55-201ENST00000295008 C14orf93Q9H972 538 aaKnown RBP22.7■■□□□ 1.22
MRPL55-201ENST00000295008 ADGRB1O14514 1584 aa22.7■■□□□ 1.22
MRPL55-201ENST00000295008 SLC26A8Q96RN1 970 aa22.68■■□□□ 1.22
MRPL55-201ENST00000295008 ROCK2O75116 1388 aaKnown RBP22.67■■□□□ 1.22
MRPL55-201ENST00000295008 METP08581 1390 aa22.65■■□□□ 1.22
MRPL55-201ENST00000295008 NBPF1Q3BBV0 1214 aa22.65■■□□□ 1.22
MRPL55-201ENST00000295008 GPRASP1Q5JY77 1395 aa22.64■■□□□ 1.22
MRPL55-201ENST00000295008 TBX22Q9Y458 520 aa22.64■■□□□ 1.21
MRPL55-201ENST00000295008 TMEM132EQ6IEE7 984 aa22.62■■□□□ 1.21
MRPL55-201ENST00000295008 KNDC1Q76NI1 1749 aa22.6■■□□□ 1.21
MRPL55-201ENST00000295008 XRN1Q8IZH2 1706 aaKnown RBP22.6■■□□□ 1.21
MRPL55-201ENST00000295008 YTHDC2Q9H6S0 1430 aaKnown RBP22.6■■□□□ 1.21
MRPL55-201ENST00000295008 PIK3R4Q99570 1358 aa22.6■■□□□ 1.21
MRPL55-201ENST00000295008 NWD1Q149M9 1564 aa22.59■■□□□ 1.21
MRPL55-201ENST00000295008 PTPRUQ92729 1446 aa22.59■■□□□ 1.21
MRPL55-201ENST00000295008 CHD2O14647 1828 aaKnown RBP22.59■■□□□ 1.21
MRPL55-201ENST00000295008 FBXO41Q8TF61 875 aa22.58■■□□□ 1.21
MRPL55-201ENST00000295008 CARD11Q9BXL7 1154 aa22.58■■□□□ 1.21
MRPL55-201ENST00000295008 ARHGEF28Q8N1W1 1705 aaKnown RBP22.57■■□□□ 1.2
MRPL55-201ENST00000295008 DMRT2Q9Y5R5 561 aa22.57■■□□□ 1.2
MRPL55-201ENST00000295008 LRPPRCP42704 1394 aaKnown RBP22.57■■□□□ 1.2
MRPL55-201ENST00000295008 CPS1P31327 1500 aa22.57■■□□□ 1.2
MRPL55-201ENST00000295008 TECPR2O15040 1411 aa22.54■■□□□ 1.2
MRPL55-201ENST00000295008 STRCP1A6NGW2 1772 aa22.53■■□□□ 1.2
MRPL55-201ENST00000295008 DLC1Q96QB1 1528 aa22.53■■□□□ 1.2
MRPL55-201ENST00000295008 STK26Q9P289 416 aa22.53■■□□□ 1.2
MRPL55-201ENST00000295008 ABCC11Q96J66 1382 aa22.51■■□□□ 1.19
MRPL55-201ENST00000295008 USP47Q96K76 1375 aa22.51■■□□□ 1.19
MRPL55-201ENST00000295008 TRAK1Q9UPV9 953 aa22.51■■□□□ 1.19
MRPL55-201ENST00000295008 PTCH1Q13635 1447 aa22.5■■□□□ 1.19
MRPL55-201ENST00000295008 AMOTL2Q9Y2J4 779 aa22.5■■□□□ 1.19
MRPL55-201ENST00000295008 NKTRP30414 1462 aaKnown RBP22.49■■□□□ 1.19
MRPL55-201ENST00000295008 EIF3AQ14152 1382 aaKnown RBP22.49■■□□□ 1.19
MRPL55-201ENST00000295008 KCNA6P17658 529 aa22.48■■□□□ 1.19
MRPL55-201ENST00000295008 ROBO2Q9HCK4 1378 aa22.48■■□□□ 1.19
MRPL55-201ENST00000295008 QRICH2Q9H0J4 1663 aa22.47■■□□□ 1.19
MRPL55-201ENST00000295008 ZNF335Q9H4Z2 1342 aaPredicted RBP22.47■■□□□ 1.19
MRPL55-201ENST00000295008 FAM135BQ49AJ0 1406 aa22.46■■□□□ 1.19
MRPL55-201ENST00000295008 EIF4G2P78344 907 aaKnown RBP eCLIP22.44■■□□□ 1.18
MRPL55-201ENST00000295008 PLEKHH1Q9ULM0 1364 aa22.44■■□□□ 1.18
MRPL55-201ENST00000295008 PRAM1Q96QH2 718 aa22.43■■□□□ 1.18
MRPL55-201ENST00000295008 HSPA5P11021 654 aaKnown RBP22.42■■□□□ 1.18
MRPL55-201ENST00000295008 CENPJQ9HC77 1338 aaPredicted RBP22.41■■□□□ 1.18
MRPL55-201ENST00000295008 SIRT1Q96EB6 747 aa22.41■■□□□ 1.18
MRPL55-201ENST00000295008 WAPLQ7Z5K2 1190 aa22.4■■□□□ 1.18
MRPL55-201ENST00000295008 POGKQ9P215 609 aa22.4■■□□□ 1.18
MRPL55-201ENST00000295008 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.4■■□□□ 1.18
MRPL55-201ENST00000295008 ST20-MTHFSA0A0A6YYL1 179 aa22.39■■□□□ 1.17
MRPL55-201ENST00000295008 NALCNQ8IZF0 1738 aa22.39■■□□□ 1.17
MRPL55-201ENST00000295008 LTBP4Q8N2S1 1624 aa22.39■■□□□ 1.17
MRPL55-201ENST00000295008 SAFB2Q14151 953 aaKnown RBP eCLIP22.38■■□□□ 1.17
MRPL55-201ENST00000295008 LRRC7Q96NW7 1537 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms