RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 TESK2Q96S53 571 aa19.43■□□□□ 0.7
ABCF3-201ENST00000292808 ADGRF5Q8IZF2 1346 aa19.41■□□□□ 0.7
ABCF3-201ENST00000292808 PREX1Q8TCU6 1659 aa19.41■□□□□ 0.7
ABCF3-201ENST00000292808 POLR3GLQ9BT43 218 aa19.41■□□□□ 0.7
ABCF3-201ENST00000292808 PRKRIP1Q9H875 184 aaPredicted RBP19.41■□□□□ 0.7
ABCF3-201ENST00000292808 DISP3Q9P2K9 1392 aa19.39■□□□□ 0.69
ABCF3-201ENST00000292808 SCAF11Q99590 1463 aaKnown RBP19.38■□□□□ 0.69
ABCF3-201ENST00000292808 SUPT16HQ9Y5B9 1047 aaKnown RBP19.37■□□□□ 0.69
ABCF3-201ENST00000292808 CCDC184Q52MB2 194 aa19.36■□□□□ 0.69
ABCF3-201ENST00000292808 CLTCQ00610 1675 aaKnown RBP19.35■□□□□ 0.69
ABCF3-201ENST00000292808 CHGAP10645 457 aaKnown RBP19.34■□□□□ 0.69
ABCF3-201ENST00000292808 CFAP70Q5T0N1 1121 aa19.34■□□□□ 0.69
ABCF3-201ENST00000292808 NEXMIFQ5QGS0 1516 aa19.34■□□□□ 0.69
ABCF3-201ENST00000292808 MYO5BQ9ULV0 1848 aa19.34■□□□□ 0.69
ABCF3-201ENST00000292808 PIK3C2GO75747 1445 aa19.34■□□□□ 0.69
ABCF3-201ENST00000292808 ERVK-7P63135 1459 aa19.31■□□□□ 0.68
ABCF3-201ENST00000292808 TMEM131LA2VDJ0 1609 aa19.31■□□□□ 0.68
ABCF3-201ENST00000292808 SETBP1Q9Y6X0 1596 aa19.31■□□□□ 0.68
ABCF3-201ENST00000292808 IDI1Q13907 227 aa19.3■□□□□ 0.68
ABCF3-201ENST00000292808 RPGRIP1LQ68CZ1 1315 aa19.29■□□□□ 0.68
ABCF3-201ENST00000292808 ADGRB1O14514 1584 aa19.29■□□□□ 0.68
ABCF3-201ENST00000292808 FBXO31Q5XUX0 539 aaPredicted RBP19.29■□□□□ 0.68
ABCF3-201ENST00000292808 MYO3AQ8NEV4 1616 aa19.28■□□□□ 0.68
ABCF3-201ENST00000292808 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
ABCF3-201ENST00000292808 TMF1P82094 1093 aa19.27■□□□□ 0.67
ABCF3-201ENST00000292808 SLC52A1Q9NWF4 448 aa19.27■□□□□ 0.67
ABCF3-201ENST00000292808 SPATA31D1Q6ZQQ2 1576 aa19.26■□□□□ 0.67
ABCF3-201ENST00000292808 CNGB1Q14028 1251 aaPredicted RBP19.26■□□□□ 0.67
ABCF3-201ENST00000292808 C14orf93Q9H972 538 aaKnown RBP19.25■□□□□ 0.67
ABCF3-201ENST00000292808 EIF3AQ14152 1382 aaKnown RBP19.24■□□□□ 0.67
ABCF3-201ENST00000292808 HNRNPUQ00839 825 aaKnown RBP eCLIP19.24■□□□□ 0.67
ABCF3-201ENST00000292808 MYOM1P52179 1685 aa19.24■□□□□ 0.67
ABCF3-201ENST00000292808 MLECQ14165 292 aa19.23■□□□□ 0.67
ABCF3-201ENST00000292808 PER1O15534 1290 aaPredicted RBP19.23■□□□□ 0.67
ABCF3-201ENST00000292808 ZFYVE9O95405 1425 aa19.22■□□□□ 0.67
ABCF3-201ENST00000292808 NUTM2DQ5VT03 806 aaPredicted RBP19.22■□□□□ 0.67
ABCF3-201ENST00000292808 MRS2Q9HD23 443 aa19.22■□□□□ 0.67
ABCF3-201ENST00000292808 KDM5AP29375 1690 aaKnown RBP19.19■□□□□ 0.66
ABCF3-201ENST00000292808 FAM9BQ8IZU0 186 aa19.19■□□□□ 0.66
ABCF3-201ENST00000292808 ASXL1Q8IXJ9 1541 aa19.19■□□□□ 0.66
ABCF3-201ENST00000292808 VGFO15240 615 aaPredicted RBP19.17■□□□□ 0.66
ABCF3-201ENST00000292808 PANK3Q9H999 370 aa19.17■□□□□ 0.66
ABCF3-201ENST00000292808 QRICH2Q9H0J4 1663 aa19.17■□□□□ 0.66
ABCF3-201ENST00000292808 PARD3Q8TEW0 1356 aa19.16■□□□□ 0.66
ABCF3-201ENST00000292808 SBNO2Q9Y2G9 1366 aa19.16■□□□□ 0.66
ABCF3-201ENST00000292808 ARHGEF28Q8N1W1 1705 aaKnown RBP19.16■□□□□ 0.66
ABCF3-201ENST00000292808 TMEM132EQ6IEE7 984 aa19.16■□□□□ 0.66
ABCF3-201ENST00000292808 KTN1Q86UP2 1357 aaKnown RBP19.16■□□□□ 0.66
ABCF3-201ENST00000292808 A2ML1A8K2U0 1454 aa19.15■□□□□ 0.66
ABCF3-201ENST00000292808 ZMYM3Q14202 1370 aa19.14■□□□□ 0.65
ABCF3-201ENST00000292808 FKBP8Q14318 412 aa19.13■□□□□ 0.65
ABCF3-201ENST00000292808 RALBP1Q15311 655 aa19.13■□□□□ 0.65
ABCF3-201ENST00000292808 TRAK1Q9UPV9 953 aa19.13■□□□□ 0.65
ABCF3-201ENST00000292808 CENPJQ9HC77 1338 aaPredicted RBP19.12■□□□□ 0.65
ABCF3-201ENST00000292808 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
ABCF3-201ENST00000292808 MYBBP1AQ9BQG0 1328 aaKnown RBP19.11■□□□□ 0.65
ABCF3-201ENST00000292808 BCANQ96GW7 911 aa19.09■□□□□ 0.65
ABCF3-201ENST00000292808 NEFLP07196 543 aa19.09■□□□□ 0.65
ABCF3-201ENST00000292808 BRD4O60885 1362 aaPredicted RBP19.08■□□□□ 0.65
ABCF3-201ENST00000292808 ALKQ9UM73 1620 aa19.08■□□□□ 0.65
ABCF3-201ENST00000292808 SETD1AO15047 1707 aaKnown RBP19.07■□□□□ 0.64
ABCF3-201ENST00000292808 PNISRQ8TF01 805 aaKnown RBP19.07■□□□□ 0.64
ABCF3-201ENST00000292808 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
ABCF3-201ENST00000292808 CC2D1BQ5T0F9 858 aaKnown RBP19.06■□□□□ 0.64
ABCF3-201ENST00000292808 RIMS2Q9UQ26 1411 aa19.06■□□□□ 0.64
ABCF3-201ENST00000292808 TRHP20396 242 aaPredicted RBP19.06■□□□□ 0.64
ABCF3-201ENST00000292808 TULP4Q9NRJ4 1543 aa19.05■□□□□ 0.64
ABCF3-201ENST00000292808 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
ABCF3-201ENST00000292808 PTPRMP28827 1452 aa19.05■□□□□ 0.64
ABCF3-201ENST00000292808 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
ABCF3-201ENST00000292808 STAG3Q9UJ98 1225 aa19.05■□□□□ 0.64
ABCF3-201ENST00000292808 NRXN3Q9Y4C0 1643 aa19.04■□□□□ 0.64
ABCF3-201ENST00000292808 AMER1Q5JTC6 1135 aaPredicted RBP19.04■□□□□ 0.64
ABCF3-201ENST00000292808 LRPPRCP42704 1394 aaKnown RBP19.04■□□□□ 0.64
ABCF3-201ENST00000292808 TNRQ92752 1358 aa19.04■□□□□ 0.64
ABCF3-201ENST00000292808 UBR1Q8IWV7 1749 aa19.03■□□□□ 0.64
ABCF3-201ENST00000292808 TMC1Q8TDI8 760 aa19.02■□□□□ 0.64
ABCF3-201ENST00000292808 NLRP13Q86W25 1043 aa19.02■□□□□ 0.64
ABCF3-201ENST00000292808 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.63
ABCF3-201ENST00000292808 C3P01024 1663 aa19.01■□□□□ 0.63
ABCF3-201ENST00000292808 ZBED9Q6R2W3 1325 aa19■□□□□ 0.63
ABCF3-201ENST00000292808 FER1L4A9Z1Z3 1794 aa18.99■□□□□ 0.63
ABCF3-201ENST00000292808 KNSTRNQ9Y448 316 aa18.99■□□□□ 0.63
ABCF3-201ENST00000292808 CARD14Q9BXL6 1004 aa18.99■□□□□ 0.63
ABCF3-201ENST00000292808 NPC1L1Q9UHC9 1359 aa18.99■□□□□ 0.63
ABCF3-201ENST00000292808 STK26Q9P289 416 aa18.98■□□□□ 0.63
ABCF3-201ENST00000292808 CEBPAP49715 358 aaPredicted RBP18.95■□□□□ 0.62
ABCF3-201ENST00000292808 TSHZ2Q9NRE2 1034 aa18.95■□□□□ 0.62
ABCF3-201ENST00000292808 DLC1Q96QB1 1528 aa18.94■□□□□ 0.62
ABCF3-201ENST00000292808 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
ABCF3-201ENST00000292808 SENP3-EIF4A1A0A087X0R7 540 aa18.93■□□□□ 0.62
ABCF3-201ENST00000292808 SLC12A5Q9H2X9 1139 aa18.93■□□□□ 0.62
ABCF3-201ENST00000292808 EVC2Q86UK5 1308 aa18.93■□□□□ 0.62
ABCF3-201ENST00000292808 PPP2R1AP30153 589 aa18.93■□□□□ 0.62
ABCF3-201ENST00000292808 PUS7Q96PZ0 661 aaKnown RBP18.93■□□□□ 0.62
ABCF3-201ENST00000292808 TMEM2Q9UHN6 1383 aa18.93■□□□□ 0.62
ABCF3-201ENST00000292808 NLRP1Q9C000 1473 aa18.93■□□□□ 0.62
ABCF3-201ENST00000292808 PRAM1Q96QH2 718 aa18.92■□□□□ 0.62
ABCF3-201ENST00000292808 IRX6P78412 446 aaPredicted RBP18.92■□□□□ 0.62
ABCF3-201ENST00000292808 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms