RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 FAM184AQ8NB25 1140 aa18.82■□□□□ 0.6
SHROOM4-201ENST00000289292 FOSBP53539 338 aa18.81■□□□□ 0.6
SHROOM4-201ENST00000289292 R3HCC1Q9Y3T6 440 aaKnown RBP18.81■□□□□ 0.6
SHROOM4-201ENST00000289292 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
SHROOM4-201ENST00000289292 ANO2Q9NQ90 1003 aa18.81■□□□□ 0.6
SHROOM4-201ENST00000289292 PDS5BQ9NTI5 1447 aa18.81■□□□□ 0.6
SHROOM4-201ENST00000289292 LRRC9Q6ZRR7 1453 aa18.8■□□□□ 0.6
SHROOM4-201ENST00000289292 A0A0U1RQG5 324 aaPredicted RBP18.8■□□□□ 0.6
SHROOM4-201ENST00000289292 PKNOX2Q96KN3 472 aa18.8■□□□□ 0.6
SHROOM4-201ENST00000289292 BECN2A8MW95 431 aa18.79■□□□□ 0.6
SHROOM4-201ENST00000289292 PES1O00541 588 aaKnown RBP18.79■□□□□ 0.6
SHROOM4-201ENST00000289292 PRKCSHP14314 528 aaPredicted RBP18.78■□□□□ 0.6
SHROOM4-201ENST00000289292 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.78■□□□□ 0.6
SHROOM4-201ENST00000289292 RUNDC1Q96C34 613 aa18.78■□□□□ 0.6
SHROOM4-201ENST00000289292 EIF2S2P20042 333 aaKnown RBP18.78■□□□□ 0.6
SHROOM4-201ENST00000289292 DIAPH3Q9NSV4 1193 aa18.77■□□□□ 0.6
SHROOM4-201ENST00000289292 MSH5O43196 834 aa18.77■□□□□ 0.6
SHROOM4-201ENST00000289292 RNF214Q8ND24 703 aa18.77■□□□□ 0.6
SHROOM4-201ENST00000289292 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
SHROOM4-201ENST00000289292 TRAK2O60296 914 aa18.77■□□□□ 0.59
SHROOM4-201ENST00000289292 CADPSQ9ULU8 1353 aa18.77■□□□□ 0.59
SHROOM4-201ENST00000289292 NGEFQ8N5V2 710 aa18.76■□□□□ 0.59
SHROOM4-201ENST00000289292 EVC2Q86UK5 1308 aa18.76■□□□□ 0.59
SHROOM4-201ENST00000289292 HMOX1P09601 288 aa18.76■□□□□ 0.59
SHROOM4-201ENST00000289292 REC8O95072 547 aa18.76■□□□□ 0.59
SHROOM4-201ENST00000289292 PRDM2Q13029 1718 aa18.76■□□□□ 0.59
SHROOM4-201ENST00000289292 DIAPH1O60610 1272 aaKnown RBP18.75■□□□□ 0.59
SHROOM4-201ENST00000289292 NASPP49321 788 aaPredicted RBP18.75■□□□□ 0.59
SHROOM4-201ENST00000289292 COG3Q96JB2 828 aa18.75■□□□□ 0.59
SHROOM4-201ENST00000289292 ATP6V1DQ9Y5K8 247 aa18.75■□□□□ 0.59
SHROOM4-201ENST00000289292 VPS37CA5D8V6 355 aaPredicted RBP18.74■□□□□ 0.59
SHROOM4-201ENST00000289292 RBM10P98175 930 aaKnown RBP18.74■□□□□ 0.59
SHROOM4-201ENST00000289292 MYOM3Q5VTT5 1437 aa18.74■□□□□ 0.59
SHROOM4-201ENST00000289292 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
SHROOM4-201ENST00000289292 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
SHROOM4-201ENST00000289292 TPM3P06753 285 aa18.73■□□□□ 0.59
SHROOM4-201ENST00000289292 BCAR3O75815 825 aa18.73■□□□□ 0.59
SHROOM4-201ENST00000289292 RSPH4AQ5TD94 716 aa18.73■□□□□ 0.59
SHROOM4-201ENST00000289292 BRD4O60885 1362 aaPredicted RBP18.73■□□□□ 0.59
SHROOM4-201ENST00000289292 TPD52L1Q16890 204 aaPredicted RBP18.73■□□□□ 0.59
SHROOM4-201ENST00000289292 MRE11P49959 708 aa18.72■□□□□ 0.59
SHROOM4-201ENST00000289292 BICD2Q8TD16 824 aa18.72■□□□□ 0.59
SHROOM4-201ENST00000289292 INTS3Q68E01 1043 aaKnown RBP18.72■□□□□ 0.59
SHROOM4-201ENST00000289292 PDZRN3Q9UPQ7 1066 aa18.72■□□□□ 0.59
SHROOM4-201ENST00000289292 CAVIN1Q6NZI2 390 aaKnown RBP18.72■□□□□ 0.59
SHROOM4-201ENST00000289292 C1orf115Q9H7X2 142 aa18.72■□□□□ 0.59
SHROOM4-201ENST00000289292 CUX1P39880 1505 aa18.71■□□□□ 0.59
SHROOM4-201ENST00000289292 SKAP1Q86WV1 359 aa18.71■□□□□ 0.58
SHROOM4-201ENST00000289292 BACH2Q9BYV9 841 aa18.7■□□□□ 0.58
SHROOM4-201ENST00000289292 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
SHROOM4-201ENST00000289292 NUCB2P80303 420 aa18.69■□□□□ 0.58
SHROOM4-201ENST00000289292 KIF3AQ9Y496 699 aa18.69■□□□□ 0.58
SHROOM4-201ENST00000289292 IFT57Q9NWB7 429 aa18.69■□□□□ 0.58
SHROOM4-201ENST00000289292 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
SHROOM4-201ENST00000289292 CCDC27Q2M243 656 aa18.69■□□□□ 0.58
SHROOM4-201ENST00000289292 CCDC34Q96HJ3 373 aa18.69■□□□□ 0.58
SHROOM4-201ENST00000289292 IGF1RP08069 1367 aa18.68■□□□□ 0.58
SHROOM4-201ENST00000289292 SMC3Q9UQE7 1217 aa18.68■□□□□ 0.58
SHROOM4-201ENST00000289292 NCOA2Q15596 1464 aa18.68■□□□□ 0.58
SHROOM4-201ENST00000289292 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
SHROOM4-201ENST00000289292 GGNBP2Q9H3C7 697 aa18.68■□□□□ 0.58
SHROOM4-201ENST00000289292 HDAC5Q9UQL6 1122 aa18.68■□□□□ 0.58
SHROOM4-201ENST00000289292 FANCD2Q9BXW9 1451 aa18.67■□□□□ 0.58
SHROOM4-201ENST00000289292 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
SHROOM4-201ENST00000289292 FGD5Q6ZNL6 1462 aa18.67■□□□□ 0.58
SHROOM4-201ENST00000289292 HOMER1Q86YM7 354 aa18.67■□□□□ 0.58
SHROOM4-201ENST00000289292 NBPF8Q3BBV2 869 aa18.66■□□□□ 0.58
SHROOM4-201ENST00000289292 API5Q9BZZ5 524 aaKnown RBP18.66■□□□□ 0.58
SHROOM4-201ENST00000289292 C9orf78Q9NZ63 289 aaPredicted RBP18.66■□□□□ 0.58
SHROOM4-201ENST00000289292 IFIT2P09913 472 aaKnown RBP18.66■□□□□ 0.58
SHROOM4-201ENST00000289292 PPP2R1AP30153 589 aa18.66■□□□□ 0.58
SHROOM4-201ENST00000289292 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
SHROOM4-201ENST00000289292 CDC45O75419 566 aa18.66■□□□□ 0.58
SHROOM4-201ENST00000289292 RRBP1Q9P2E9 1410 aaKnown RBP18.66■□□□□ 0.58
SHROOM4-201ENST00000289292 MPNDQ8N594 471 aa18.66■□□□□ 0.58
SHROOM4-201ENST00000289292 CABP2Q9NPB3 220 aa18.66■□□□□ 0.58
SHROOM4-201ENST00000289292 SETQ01105 290 aaPredicted RBP18.65■□□□□ 0.58
SHROOM4-201ENST00000289292 PRPF40AO75400 957 aaKnown RBP18.65■□□□□ 0.58
SHROOM4-201ENST00000289292 ZKSCAN1P17029 563 aaPredicted RBP18.64■□□□□ 0.57
SHROOM4-201ENST00000289292 CCDC39Q9UFE4 941 aa18.64■□□□□ 0.57
SHROOM4-201ENST00000289292 CHMP4AQ9BY43 222 aa18.64■□□□□ 0.57
SHROOM4-201ENST00000289292 SASS6Q6UVJ0 657 aa18.64■□□□□ 0.57
SHROOM4-201ENST00000289292 RUFY2Q8WXA3 655 aa18.64■□□□□ 0.57
SHROOM4-201ENST00000289292 KDM4AO75164 1064 aa18.63■□□□□ 0.57
SHROOM4-201ENST00000289292 NBPF1Q3BBV0 1214 aa18.62■□□□□ 0.57
SHROOM4-201ENST00000289292 TMEM132EQ6IEE7 984 aa18.62■□□□□ 0.57
SHROOM4-201ENST00000289292 TSR2Q969E8 191 aaKnown RBP18.62■□□□□ 0.57
SHROOM4-201ENST00000289292 PATL2C9JE40 543 aaKnown RBP18.62■□□□□ 0.57
SHROOM4-201ENST00000289292 TCP11L2Q8N4U5 519 aa18.62■□□□□ 0.57
SHROOM4-201ENST00000289292 C1orf141Q5JVX7 400 aa18.62■□□□□ 0.57
SHROOM4-201ENST00000289292 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
SHROOM4-201ENST00000289292 MTHFSP49914 203 aa18.61■□□□□ 0.57
SHROOM4-201ENST00000289292 VGFO15240 615 aaPredicted RBP18.61■□□□□ 0.57
SHROOM4-201ENST00000289292 EXOSC9Q06265 439 aaKnown RBP18.6■□□□□ 0.57
SHROOM4-201ENST00000289292 VPS53Q5VIR6 699 aa18.6■□□□□ 0.57
SHROOM4-201ENST00000289292 TSPYL4Q9UJ04 414 aa18.6■□□□□ 0.57
SHROOM4-201ENST00000289292 ROCK1Q13464 1354 aa18.6■□□□□ 0.57
SHROOM4-201ENST00000289292 NOB1Q9ULX3 412 aaKnown RBP18.6■□□□□ 0.57
SHROOM4-201ENST00000289292 CFTRP13569 1480 aa18.59■□□□□ 0.57
SHROOM4-201ENST00000289292 MIA2Q96PC5 1412 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms