RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 MINK1Q8N4C8 1332 aaPredicted RBP20.43■□□□□ 0.86
SMAD6-201ENST00000288840 E9PSI1 815 aa20.41■□□□□ 0.86
SMAD6-201ENST00000288840 PRAG1Q86YV5 1406 aa20.41■□□□□ 0.86
SMAD6-201ENST00000288840 ELL2O00472 640 aaPredicted RBP20.41■□□□□ 0.86
SMAD6-201ENST00000288840 FAM161AQ3B820 660 aa20.41■□□□□ 0.86
SMAD6-201ENST00000288840 GGNBP2Q9H3C7 697 aa20.41■□□□□ 0.86
SMAD6-201ENST00000288840 SYCP2Q9BX26 1530 aa20.41■□□□□ 0.86
SMAD6-201ENST00000288840 MS4A1P11836 297 aa20.39■□□□□ 0.86
SMAD6-201ENST00000288840 ITPRIPQ8IWB1 547 aa20.39■□□□□ 0.86
SMAD6-201ENST00000288840 TCP11L2Q8N4U5 519 aa20.39■□□□□ 0.86
SMAD6-201ENST00000288840 CEP170Q5SW79 1584 aa20.39■□□□□ 0.85
SMAD6-201ENST00000288840 NUTM2FA1L443 756 aa20.39■□□□□ 0.85
SMAD6-201ENST00000288840 SMC4Q9NTJ3 1288 aa20.39■□□□□ 0.85
SMAD6-201ENST00000288840 FAM135AQ9P2D6 1515 aa20.38■□□□□ 0.85
SMAD6-201ENST00000288840 DUSP27Q5VZP5 1158 aa20.38■□□□□ 0.85
SMAD6-201ENST00000288840 RAPGEF3O95398 923 aa20.37■□□□□ 0.85
SMAD6-201ENST00000288840 BECN1Q14457 450 aa20.37■□□□□ 0.85
SMAD6-201ENST00000288840 PARD3Q8TEW0 1356 aa20.36■□□□□ 0.85
SMAD6-201ENST00000288840 SPINK5Q9NQ38 1064 aaPredicted RBP20.36■□□□□ 0.85
SMAD6-201ENST00000288840 AMER1Q5JTC6 1135 aaPredicted RBP20.35■□□□□ 0.85
SMAD6-201ENST00000288840 SLFN5Q08AF3 891 aa20.33■□□□□ 0.85
SMAD6-201ENST00000288840 TSR2Q969E8 191 aaKnown RBP20.33■□□□□ 0.85
SMAD6-201ENST00000288840 ITSN2Q9NZM3 1697 aa20.33■□□□□ 0.85
SMAD6-201ENST00000288840 TRAPPC8Q9Y2L5 1435 aa20.33■□□□□ 0.85
SMAD6-201ENST00000288840 MFAP1P55081 439 aaKnown RBP20.32■□□□□ 0.84
SMAD6-201ENST00000288840 GZF1Q9H116 711 aaPredicted RBP20.31■□□□□ 0.84
SMAD6-201ENST00000288840 LRPPRCP42704 1394 aaKnown RBP20.31■□□□□ 0.84
SMAD6-201ENST00000288840 PLEKHH1Q9ULM0 1364 aa20.31■□□□□ 0.84
SMAD6-201ENST00000288840 APBB1O00213 710 aa20.31■□□□□ 0.84
SMAD6-201ENST00000288840 ADGRL2O95490 1459 aa20.31■□□□□ 0.84
SMAD6-201ENST00000288840 CGNL1Q0VF96 1302 aa20.3■□□□□ 0.84
SMAD6-201ENST00000288840 NUP160Q12769 1436 aa20.3■□□□□ 0.84
SMAD6-201ENST00000288840 BCORL1Q5H9F3 1711 aa20.3■□□□□ 0.84
SMAD6-201ENST00000288840 A2MP01023 1474 aa20.3■□□□□ 0.84
SMAD6-201ENST00000288840 MYH16Q9H6N6 1097 aa20.29■□□□□ 0.84
SMAD6-201ENST00000288840 UHRF1BP1Q6BDS2 1440 aa20.29■□□□□ 0.84
SMAD6-201ENST00000288840 IL27Q8NEV9 243 aa20.29■□□□□ 0.84
SMAD6-201ENST00000288840 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
SMAD6-201ENST00000288840 NFKBIBQ15653 356 aa20.28■□□□□ 0.84
SMAD6-201ENST00000288840 RUNDC1Q96C34 613 aa20.28■□□□□ 0.84
SMAD6-201ENST00000288840 RNF123Q5XPI4 1314 aa20.28■□□□□ 0.84
SMAD6-201ENST00000288840 WWC1Q8IX03 1113 aa20.27■□□□□ 0.84
SMAD6-201ENST00000288840 CYB5RLQ6IPT4 315 aa20.27■□□□□ 0.84
SMAD6-201ENST00000288840 CARD14Q9BXL6 1004 aa20.26■□□□□ 0.83
SMAD6-201ENST00000288840 RWDD1Q9H446 243 aaPredicted RBP20.26■□□□□ 0.83
SMAD6-201ENST00000288840 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.26■□□□□ 0.83
SMAD6-201ENST00000288840 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
SMAD6-201ENST00000288840 EVC2Q86UK5 1308 aa20.26■□□□□ 0.83
SMAD6-201ENST00000288840 MBD5Q9P267 1494 aa20.25■□□□□ 0.83
SMAD6-201ENST00000288840 VGFO15240 615 aaPredicted RBP20.25■□□□□ 0.83
SMAD6-201ENST00000288840 HMOX1P09601 288 aa20.25■□□□□ 0.83
SMAD6-201ENST00000288840 FRAT2O75474 233 aaPredicted RBP20.24■□□□□ 0.83
SMAD6-201ENST00000288840 FBLN1P23142 703 aa20.24■□□□□ 0.83
SMAD6-201ENST00000288840 ZBTB7CA1YPR0 619 aa20.24■□□□□ 0.83
SMAD6-201ENST00000288840 ABCC10Q5T3U5 1492 aa20.24■□□□□ 0.83
SMAD6-201ENST00000288840 IGHDP01880 384 aa20.23■□□□□ 0.83
SMAD6-201ENST00000288840 HDGFL2Q7Z4V5 671 aaPredicted RBP20.23■□□□□ 0.83
SMAD6-201ENST00000288840 FOXD4L1Q9NU39 408 aa20.23■□□□□ 0.83
SMAD6-201ENST00000288840 RIPK4P57078 832 aa20.22■□□□□ 0.83
SMAD6-201ENST00000288840 PMFBP1Q8TBY8 1022 aa20.22■□□□□ 0.83
SMAD6-201ENST00000288840 KDM5CP41229 1560 aa20.22■□□□□ 0.83
SMAD6-201ENST00000288840 C14orf37Q86TY3 774 aa20.21■□□□□ 0.83
SMAD6-201ENST00000288840 NSD3Q9BZ95 1437 aa20.21■□□□□ 0.83
SMAD6-201ENST00000288840 TERF2IPQ9NYB0 399 aa20.2■□□□□ 0.82
SMAD6-201ENST00000288840 EXOSC9Q06265 439 aaKnown RBP20.2■□□□□ 0.82
SMAD6-201ENST00000288840 ZKSCAN2Q63HK3 967 aa20.19■□□□□ 0.82
SMAD6-201ENST00000288840 ARHGEF12Q9NZN5 1544 aa20.19■□□□□ 0.82
SMAD6-201ENST00000288840 GSE1Q14687 1217 aa20.18■□□□□ 0.82
SMAD6-201ENST00000288840 PRAM1Q96QH2 718 aa20.18■□□□□ 0.82
SMAD6-201ENST00000288840 BRPF3Q9ULD4 1205 aa20.18■□□□□ 0.82
SMAD6-201ENST00000288840 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
SMAD6-201ENST00000288840 DZIP1LQ8IYY4 767 aaKnown RBP20.17■□□□□ 0.82
SMAD6-201ENST00000288840 PDZRN3Q9UPQ7 1066 aa20.17■□□□□ 0.82
SMAD6-201ENST00000288840 PLA2R1Q13018 1463 aa20.17■□□□□ 0.82
SMAD6-201ENST00000288840 PLCH2O75038 1416 aa20.16■□□□□ 0.82
SMAD6-201ENST00000288840 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
SMAD6-201ENST00000288840 STAC3Q96MF2 364 aa20.16■□□□□ 0.82
SMAD6-201ENST00000288840 TPRNQ4KMQ1 711 aa20.16■□□□□ 0.82
SMAD6-201ENST00000288840 COL17A1Q9UMD9 1497 aaPredicted RBP20.15■□□□□ 0.82
SMAD6-201ENST00000288840 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
SMAD6-201ENST00000288840 SCAF11Q99590 1463 aaKnown RBP20.15■□□□□ 0.82
SMAD6-201ENST00000288840 NOS1P29475 1434 aa20.14■□□□□ 0.81
SMAD6-201ENST00000288840 THUMPD2Q9BTF0 503 aaKnown RBP20.13■□□□□ 0.81
SMAD6-201ENST00000288840 DIAPH1O60610 1272 aaKnown RBP20.13■□□□□ 0.81
SMAD6-201ENST00000288840 USP35Q9P2H5 1018 aa20.13■□□□□ 0.81
SMAD6-201ENST00000288840 C1orf115Q9H7X2 142 aa20.12■□□□□ 0.81
SMAD6-201ENST00000288840 CABP1Q9NZU7 370 aa20.12■□□□□ 0.81
SMAD6-201ENST00000288840 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
SMAD6-201ENST00000288840 HSP90AB1P08238 724 aaKnown RBP20.11■□□□□ 0.81
SMAD6-201ENST00000288840 ADGRL1O94910 1474 aa20.11■□□□□ 0.81
SMAD6-201ENST00000288840 FANCAO15360 1455 aa20.11■□□□□ 0.81
SMAD6-201ENST00000288840 ADGBQ8N7X0 1667 aa20.11■□□□□ 0.81
SMAD6-201ENST00000288840 IPO8O15397 1037 aaKnown RBP20.1■□□□□ 0.81
SMAD6-201ENST00000288840 PDE3AQ14432 1141 aa20.1■□□□□ 0.81
SMAD6-201ENST00000288840 ANKRD45Q5TZF3 282 aa20.1■□□□□ 0.81
SMAD6-201ENST00000288840 MAGI2Q86UL8 1455 aa20.1■□□□□ 0.81
SMAD6-201ENST00000288840 IDI1Q13907 227 aa20.1■□□□□ 0.81
SMAD6-201ENST00000288840 SAMD9LQ8IVG5 1584 aa20.1■□□□□ 0.81
SMAD6-201ENST00000288840 RLBP1P12271 317 aa20.09■□□□□ 0.81
SMAD6-201ENST00000288840 ABCA8O94911 1581 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms