RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 EXOSC9Q06265 439 aaKnown RBP19.48■□□□□ 0.71
USP43-201ENST00000285199 ZRSR1Q15695 479 aaKnown RBP19.48■□□□□ 0.71
USP43-201ENST00000285199 RUNDC1Q96C34 613 aa19.48■□□□□ 0.71
USP43-201ENST00000285199 DDX19BQ9UMR2 479 aa19.48■□□□□ 0.71
USP43-201ENST00000285199 MCCP23508 829 aa19.47■□□□□ 0.71
USP43-201ENST00000285199 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
USP43-201ENST00000285199 GRPEL1Q9HAV7 217 aa19.47■□□□□ 0.71
USP43-201ENST00000285199 ESPNB1AK53 854 aa19.46■□□□□ 0.71
USP43-201ENST00000285199 KANK1Q14678 1352 aa19.46■□□□□ 0.71
USP43-201ENST00000285199 HMOX1P09601 288 aa19.46■□□□□ 0.71
USP43-201ENST00000285199 SPAG9O60271 1321 aaKnown RBP19.46■□□□□ 0.71
USP43-201ENST00000285199 ST18O60284 1047 aa19.46■□□□□ 0.71
USP43-201ENST00000285199 TBC1D2Q9BYX2 928 aa19.46■□□□□ 0.71
USP43-201ENST00000285199 CDK11BP21127 795 aaKnown RBP19.45■□□□□ 0.7
USP43-201ENST00000285199 SLFN5Q08AF3 891 aa19.45■□□□□ 0.7
USP43-201ENST00000285199 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
USP43-201ENST00000285199 SKOR2Q2VWA4 1001 aaPredicted RBP19.44■□□□□ 0.7
USP43-201ENST00000285199 DUSP27Q5VZP5 1158 aa19.44■□□□□ 0.7
USP43-201ENST00000285199 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
USP43-201ENST00000285199 HDGFL2Q7Z4V5 671 aaPredicted RBP19.44■□□□□ 0.7
USP43-201ENST00000285199 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
USP43-201ENST00000285199 CARMIL2Q6F5E8 1435 aa19.44■□□□□ 0.7
USP43-201ENST00000285199 SEC24BO95487 1268 aa19.44■□□□□ 0.7
USP43-201ENST00000285199 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
USP43-201ENST00000285199 NECTIN2Q92692 538 aa19.43■□□□□ 0.7
USP43-201ENST00000285199 MINK1Q8N4C8 1332 aaPredicted RBP19.43■□□□□ 0.7
USP43-201ENST00000285199 A0A0U1RQG5 324 aaPredicted RBP19.43■□□□□ 0.7
USP43-201ENST00000285199 PDE3AQ14432 1141 aa19.42■□□□□ 0.7
USP43-201ENST00000285199 LMOD2Q6P5Q4 547 aa19.42■□□□□ 0.7
USP43-201ENST00000285199 PCF11O94913 1555 aaKnown RBP19.42■□□□□ 0.7
USP43-201ENST00000285199 EIF3AQ14152 1382 aaKnown RBP19.42■□□□□ 0.7
USP43-201ENST00000285199 KIAA1107Q9UPP5 1409 aa19.42■□□□□ 0.7
USP43-201ENST00000285199 PTMSP20962 102 aa19.42■□□□□ 0.7
USP43-201ENST00000285199 PRPF40AO75400 957 aaKnown RBP19.41■□□□□ 0.7
USP43-201ENST00000285199 PRG4Q92954 1404 aaPredicted RBP19.41■□□□□ 0.7
USP43-201ENST00000285199 KIAA1211Q6ZU35 1233 aa19.4■□□□□ 0.7
USP43-201ENST00000285199 MIA2Q96PC5 1412 aa19.4■□□□□ 0.7
USP43-201ENST00000285199 C8orf34Q49A92 452 aa19.4■□□□□ 0.7
USP43-201ENST00000285199 CABP2Q9NPB3 220 aa19.39■□□□□ 0.69
USP43-201ENST00000285199 NOB1Q9ULX3 412 aaKnown RBP19.38■□□□□ 0.69
USP43-201ENST00000285199 RTF1Q92541 710 aaKnown RBP19.38■□□□□ 0.69
USP43-201ENST00000285199 WWC1Q8IX03 1113 aa19.38■□□□□ 0.69
USP43-201ENST00000285199 SYAP1Q96A49 352 aaPredicted RBP19.38■□□□□ 0.69
USP43-201ENST00000285199 TNNQ9UQP3 1299 aa19.38■□□□□ 0.69
USP43-201ENST00000285199 CDK13Q14004 1512 aaKnown RBP19.36■□□□□ 0.69
USP43-201ENST00000285199 AFAP1Q8N556 730 aa19.36■□□□□ 0.69
USP43-201ENST00000285199 ANO2Q9NQ90 1003 aa19.36■□□□□ 0.69
USP43-201ENST00000285199 XRCC6P12956 609 aaKnown RBP eCLIP19.35■□□□□ 0.69
USP43-201ENST00000285199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.35■□□□□ 0.69
USP43-201ENST00000285199 TERF2IPQ9NYB0 399 aa19.35■□□□□ 0.69
USP43-201ENST00000285199 MAP3K1Q13233 1512 aa19.35■□□□□ 0.69
USP43-201ENST00000285199 A0A0G2JS52 829 aa19.34■□□□□ 0.69
USP43-201ENST00000285199 RSPH4AQ5TD94 716 aa19.34■□□□□ 0.69
USP43-201ENST00000285199 DAPK1P53355 1430 aa19.34■□□□□ 0.69
USP43-201ENST00000285199 NESP48681 1621 aa19.33■□□□□ 0.68
USP43-201ENST00000285199 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.33■□□□□ 0.68
USP43-201ENST00000285199 UBE2Q2Q8WVN8 375 aa19.33■□□□□ 0.68
USP43-201ENST00000285199 ZNF592Q92610 1267 aa19.32■□□□□ 0.68
USP43-201ENST00000285199 LTV1Q96GA3 475 aaPredicted RBP19.32■□□□□ 0.68
USP43-201ENST00000285199 DIAPH1O60610 1272 aaKnown RBP19.31■□□□□ 0.68
USP43-201ENST00000285199 ZMYND15Q9H091 742 aa19.31■□□□□ 0.68
USP43-201ENST00000285199 PCDHB15Q9Y5E8 787 aa19.31■□□□□ 0.68
USP43-201ENST00000285199 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
USP43-201ENST00000285199 MVPQ14764 893 aaKnown RBP19.3■□□□□ 0.68
USP43-201ENST00000285199 RRAGDQ9NQL2 400 aaPredicted RBP19.3■□□□□ 0.68
USP43-201ENST00000285199 SPINK5Q9NQ38 1064 aaPredicted RBP19.3■□□□□ 0.68
USP43-201ENST00000285199 CCDC9Q9Y3X0 531 aaKnown RBP19.3■□□□□ 0.68
USP43-201ENST00000285199 HMMRO75330 724 aa19.29■□□□□ 0.68
USP43-201ENST00000285199 RARSP54136 660 aaKnown RBP19.29■□□□□ 0.68
USP43-201ENST00000285199 THUMPD2Q9BTF0 503 aaKnown RBP19.29■□□□□ 0.68
USP43-201ENST00000285199 NEK4P51957 841 aa19.29■□□□□ 0.68
USP43-201ENST00000285199 STK31Q9BXU1 1019 aa19.29■□□□□ 0.68
USP43-201ENST00000285199 PRDM10Q9NQV6 1147 aa19.28■□□□□ 0.68
USP43-201ENST00000285199 TMEM57Q8N5G2 664 aa19.28■□□□□ 0.68
USP43-201ENST00000285199 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.68
USP43-201ENST00000285199 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
USP43-201ENST00000285199 ERBINQ96RT1 1412 aa19.27■□□□□ 0.68
USP43-201ENST00000285199 NUCB2P80303 420 aa19.27■□□□□ 0.67
USP43-201ENST00000285199 PTPN23Q9H3S7 1636 aa19.26■□□□□ 0.67
USP43-201ENST00000285199 CCDC27Q2M243 656 aa19.26■□□□□ 0.67
USP43-201ENST00000285199 ZNF428Q96B54 188 aa19.26■□□□□ 0.67
USP43-201ENST00000285199 XPCQ01831 940 aaPredicted RBP19.26■□□□□ 0.67
USP43-201ENST00000285199 ATF7IPQ6VMQ6 1270 aa19.26■□□□□ 0.67
USP43-201ENST00000285199 SSFA2P28290 1259 aa19.26■□□□□ 0.67
USP43-201ENST00000285199 TNPO1Q92973 898 aaKnown RBP19.26■□□□□ 0.67
USP43-201ENST00000285199 CFAP44Q96MT7 982 aa19.26■□□□□ 0.67
USP43-201ENST00000285199 FBXW7Q969H0 707 aa19.25■□□□□ 0.67
USP43-201ENST00000285199 ABCC5O15440 1437 aa19.25■□□□□ 0.67
USP43-201ENST00000285199 CDC45O75419 566 aa19.24■□□□□ 0.67
USP43-201ENST00000285199 DISP3Q9P2K9 1392 aa19.24■□□□□ 0.67
USP43-201ENST00000285199 REC8O95072 547 aa19.24■□□□□ 0.67
USP43-201ENST00000285199 SSH1Q8WYL5 1049 aa19.24■□□□□ 0.67
USP43-201ENST00000285199 EVC2Q86UK5 1308 aa19.24■□□□□ 0.67
USP43-201ENST00000285199 DHX29Q7Z478 1369 aaKnown RBP19.23■□□□□ 0.67
USP43-201ENST00000285199 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
USP43-201ENST00000285199 VPS37CA5D8V6 355 aaPredicted RBP19.23■□□□□ 0.67
USP43-201ENST00000285199 K7ELQ4 463 aaPredicted RBP19.23■□□□□ 0.67
USP43-201ENST00000285199 PRKAR2BP31323 418 aa19.23■□□□□ 0.67
USP43-201ENST00000285199 RRP9O43818 475 aaKnown RBP19.23■□□□□ 0.67
USP43-201ENST00000285199 NGEFQ8N5V2 710 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms