RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
TMEM47-201ENST00000275954 GPATCH8Q9UKJ3 1502 aaKnown RBP18.3■□□□□ 0.52
TMEM47-201ENST00000275954 TRAPPC8Q9Y2L5 1435 aa18.3■□□□□ 0.52
TMEM47-201ENST00000275954 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
TMEM47-201ENST00000275954 PRAM1Q96QH2 718 aa18.3■□□□□ 0.52
TMEM47-201ENST00000275954 SLC12A5Q9H2X9 1139 aa18.29■□□□□ 0.52
TMEM47-201ENST00000275954 BRD4O60885 1362 aaPredicted RBP18.28■□□□□ 0.52
TMEM47-201ENST00000275954 USP35Q9P2H5 1018 aa18.28■□□□□ 0.52
TMEM47-201ENST00000275954 PPP2R1AP30153 589 aa18.28■□□□□ 0.52
TMEM47-201ENST00000275954 PIP4K2BP78356 416 aa18.28■□□□□ 0.52
TMEM47-201ENST00000275954 PNNQ9H307 717 aaKnown RBP18.28■□□□□ 0.52
TMEM47-201ENST00000275954 GGNBP2Q9H3C7 697 aa18.28■□□□□ 0.52
TMEM47-201ENST00000275954 MS4A1P11836 297 aa18.27■□□□□ 0.52
TMEM47-201ENST00000275954 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.52
TMEM47-201ENST00000275954 CGNL1Q0VF96 1302 aa18.26■□□□□ 0.51
TMEM47-201ENST00000275954 ZNF330Q9Y3S2 320 aaPredicted RBP18.26■□□□□ 0.51
TMEM47-201ENST00000275954 EVC2Q86UK5 1308 aa18.26■□□□□ 0.51
TMEM47-201ENST00000275954 TPRNQ4KMQ1 711 aa18.25■□□□□ 0.51
TMEM47-201ENST00000275954 E9PSI1 815 aa18.24■□□□□ 0.51
TMEM47-201ENST00000275954 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
TMEM47-201ENST00000275954 KIAA0556O60303 1618 aa18.24■□□□□ 0.51
TMEM47-201ENST00000275954 MTHFSP49914 203 aa18.23■□□□□ 0.51
TMEM47-201ENST00000275954 RWDD1Q9H446 243 aaPredicted RBP18.23■□□□□ 0.51
TMEM47-201ENST00000275954 PBRM1Q86U86 1689 aa18.23■□□□□ 0.51
TMEM47-201ENST00000275954 RPRD2Q5VT52 1461 aaKnown RBP18.22■□□□□ 0.51
TMEM47-201ENST00000275954 CCDC141Q6ZP82 1450 aa18.22■□□□□ 0.51
TMEM47-201ENST00000275954 PSME1Q06323 249 aa18.22■□□□□ 0.51
TMEM47-201ENST00000275954 ESCO1Q5FWF5 840 aa18.22■□□□□ 0.51
TMEM47-201ENST00000275954 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
TMEM47-201ENST00000275954 ANP32BQ92688 251 aaKnown RBP18.21■□□□□ 0.51
TMEM47-201ENST00000275954 IPO8O15397 1037 aaKnown RBP18.21■□□□□ 0.51
TMEM47-201ENST00000275954 PANK1Q8TE04 598 aa18.21■□□□□ 0.51
TMEM47-201ENST00000275954 DENND4BO75064 1496 aaPredicted RBP18.21■□□□□ 0.51
TMEM47-201ENST00000275954 AMPHP49418 695 aa18.21■□□□□ 0.51
TMEM47-201ENST00000275954 THEMISQ8N1K5 641 aaPredicted RBP18.21■□□□□ 0.51
TMEM47-201ENST00000275954 ADGRF5Q8IZF2 1346 aa18.2■□□□□ 0.5
TMEM47-201ENST00000275954 NCLP19338 710 aaKnown RBP18.2■□□□□ 0.5
TMEM47-201ENST00000275954 FANCIQ9NVI1 1328 aa18.2■□□□□ 0.5
TMEM47-201ENST00000275954 SKAP1Q86WV1 359 aa18.19■□□□□ 0.5
TMEM47-201ENST00000275954 MFAP1P55081 439 aaKnown RBP18.19■□□□□ 0.5
TMEM47-201ENST00000275954 WDR7Q9Y4E6 1490 aa18.19■□□□□ 0.5
TMEM47-201ENST00000275954 CENPQQ7L2Z9 268 aaPredicted RBP18.18■□□□□ 0.5
TMEM47-201ENST00000275954 KIF14Q15058 1648 aa18.18■□□□□ 0.5
TMEM47-201ENST00000275954 UGGT2Q9NYU1 1516 aa18.18■□□□□ 0.5
TMEM47-201ENST00000275954 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
TMEM47-201ENST00000275954 TCP11L2Q8N4U5 519 aa18.17■□□□□ 0.5
TMEM47-201ENST00000275954 CFAP65Q6ZU64 1925 aaKnown RBP18.16■□□□□ 0.5
TMEM47-201ENST00000275954 BCAR3O75815 825 aa18.16■□□□□ 0.5
TMEM47-201ENST00000275954 ATF3P18847 181 aa18.16■□□□□ 0.5
TMEM47-201ENST00000275954 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
TMEM47-201ENST00000275954 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
TMEM47-201ENST00000275954 ANKLE2Q86XL3 938 aa18.16■□□□□ 0.5
TMEM47-201ENST00000275954 HMOX1P09601 288 aa18.15■□□□□ 0.5
TMEM47-201ENST00000275954 PLCH2O75038 1416 aa18.15■□□□□ 0.5
TMEM47-201ENST00000275954 RIPK4P57078 832 aa18.14■□□□□ 0.49
TMEM47-201ENST00000275954 CABP1Q9NZU7 370 aa18.14■□□□□ 0.49
TMEM47-201ENST00000275954 ERBINQ96RT1 1412 aa18.14■□□□□ 0.49
TMEM47-201ENST00000275954 NUTM2BA6NNL0 878 aaPredicted RBP18.14■□□□□ 0.49
TMEM47-201ENST00000275954 NUTM2EB1AL46 878 aaPredicted RBP18.14■□□□□ 0.49
TMEM47-201ENST00000275954 NUTM2AQ8IVF1 878 aaPredicted RBP18.14■□□□□ 0.49
TMEM47-201ENST00000275954 STAC3Q96MF2 364 aa18.14■□□□□ 0.49
TMEM47-201ENST00000275954 SLC52A1Q9NWF4 448 aa18.13■□□□□ 0.49
TMEM47-201ENST00000275954 RUNDC1Q96C34 613 aa18.13■□□□□ 0.49
TMEM47-201ENST00000275954 SLC4A10Q6U841 1118 aa18.13■□□□□ 0.49
TMEM47-201ENST00000275954 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
TMEM47-201ENST00000275954 FBLN1P23142 703 aa18.13■□□□□ 0.49
TMEM47-201ENST00000275954 FAM161AQ3B820 660 aa18.12■□□□□ 0.49
TMEM47-201ENST00000275954 DIAPH1O60610 1272 aaKnown RBP18.12■□□□□ 0.49
TMEM47-201ENST00000275954 NLRP6P59044 892 aa18.12■□□□□ 0.49
TMEM47-201ENST00000275954 GZF1Q9H116 711 aaPredicted RBP18.12■□□□□ 0.49
TMEM47-201ENST00000275954 DNAJC5Q9H3Z4 198 aa18.11■□□□□ 0.49
TMEM47-201ENST00000275954 CHMP4BQ9H444 224 aaKnown RBP18.11■□□□□ 0.49
TMEM47-201ENST00000275954 CTTNBP2Q8WZ74 1663 aa18.11■□□□□ 0.49
TMEM47-201ENST00000275954 ZKSCAN2Q63HK3 967 aa18.11■□□□□ 0.49
TMEM47-201ENST00000275954 HSCBQ8IWL3 235 aa18.1■□□□□ 0.49
TMEM47-201ENST00000275954 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.1■□□□□ 0.49
TMEM47-201ENST00000275954 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
TMEM47-201ENST00000275954 CHD1O14646 1710 aa18.09■□□□□ 0.49
TMEM47-201ENST00000275954 FOXO3O43524 673 aa18.08■□□□□ 0.49
TMEM47-201ENST00000275954 OS9Q13438 667 aaPredicted RBP18.08■□□□□ 0.49
TMEM47-201ENST00000275954 CASC1Q6TDU7 716 aa18.08■□□□□ 0.49
TMEM47-201ENST00000275954 SMG6Q86US8 1419 aaKnown RBP18.08■□□□□ 0.49
TMEM47-201ENST00000275954 C20orf194Q5TEA3 1177 aa18.08■□□□□ 0.49
TMEM47-201ENST00000275954 COG3Q96JB2 828 aa18.08■□□□□ 0.48
TMEM47-201ENST00000275954 FOXD4L1Q9NU39 408 aa18.08■□□□□ 0.48
TMEM47-201ENST00000275954 CALD1Q05682 793 aaKnown RBP18.07■□□□□ 0.48
TMEM47-201ENST00000275954 CDK19Q9BWU1 502 aa18.07■□□□□ 0.48
TMEM47-201ENST00000275954 GOLGA6L22H0YM25 854 aa18.07■□□□□ 0.48
TMEM47-201ENST00000275954 TSR2Q969E8 191 aaKnown RBP18.07■□□□□ 0.48
TMEM47-201ENST00000275954 DHX29Q7Z478 1369 aaKnown RBP18.06■□□□□ 0.48
TMEM47-201ENST00000275954 ABTB2Q8N961 1025 aa18.06■□□□□ 0.48
TMEM47-201ENST00000275954 MAGI3Q5TCQ9 1506 aa18.06■□□□□ 0.48
TMEM47-201ENST00000275954 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
TMEM47-201ENST00000275954 DZIP1LQ8IYY4 767 aaKnown RBP18.05■□□□□ 0.48
TMEM47-201ENST00000275954 AMOTL2Q9Y2J4 779 aa18.05■□□□□ 0.48
TMEM47-201ENST00000275954 NECTIN2Q92692 538 aa18.04■□□□□ 0.48
TMEM47-201ENST00000275954 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
TMEM47-201ENST00000275954 EVA1CP58658 441 aa18.04■□□□□ 0.48
TMEM47-201ENST00000275954 ZC3H6P61129 1189 aaKnown RBP18.04■□□□□ 0.48
TMEM47-201ENST00000275954 ANKRD45Q5TZF3 282 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms