RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 IQGAP1P46940 1657 aa29.48■■■□□ 2.31
GFRA3-201ENST00000274721 RPGRIP1LQ68CZ1 1315 aa29.46■■■□□ 2.31
GFRA3-201ENST00000274721 SCAF11Q99590 1463 aaKnown RBP29.46■■■□□ 2.31
GFRA3-201ENST00000274721 CHGAP10645 457 aaKnown RBP29.43■■■□□ 2.3
GFRA3-201ENST00000274721 SLC52A1Q9NWF4 448 aa29.43■■■□□ 2.3
GFRA3-201ENST00000274721 ARHGEF40Q8TER5 1519 aa29.43■■■□□ 2.3
GFRA3-201ENST00000274721 PPLO60437 1756 aa29.42■■■□□ 2.3
GFRA3-201ENST00000274721 CFAP70Q5T0N1 1121 aa29.41■■■□□ 2.3
GFRA3-201ENST00000274721 DISP3Q9P2K9 1392 aa29.41■■■□□ 2.3
GFRA3-201ENST00000274721 IDI1Q13907 227 aa29.4■■■□□ 2.3
GFRA3-201ENST00000274721 TMF1P82094 1093 aa29.39■■■□□ 2.3
GFRA3-201ENST00000274721 PREX1Q8TCU6 1659 aa29.39■■■□□ 2.3
GFRA3-201ENST00000274721 GTF3C3Q9Y5Q9 886 aa29.38■■■□□ 2.29
GFRA3-201ENST00000274721 PIK3C2GO75747 1445 aa29.36■■■□□ 2.29
GFRA3-201ENST00000274721 CCDC184Q52MB2 194 aa29.34■■■□□ 2.29
GFRA3-201ENST00000274721 EIF3AQ14152 1382 aaKnown RBP29.33■■■□□ 2.29
GFRA3-201ENST00000274721 C14orf93Q9H972 538 aaKnown RBP29.33■■■□□ 2.29
GFRA3-201ENST00000274721 SETBP1Q9Y6X0 1596 aa29.32■■■□□ 2.28
GFRA3-201ENST00000274721 ERVK-7P63135 1459 aa29.31■■■□□ 2.28
GFRA3-201ENST00000274721 NEXMIFQ5QGS0 1516 aa29.31■■■□□ 2.28
GFRA3-201ENST00000274721 FBXO31Q5XUX0 539 aaPredicted RBP29.31■■■□□ 2.28
GFRA3-201ENST00000274721 VGFO15240 615 aaPredicted RBP29.28■■■□□ 2.28
GFRA3-201ENST00000274721 PER1O15534 1290 aaPredicted RBP29.28■■■□□ 2.28
GFRA3-201ENST00000274721 CLTCQ00610 1675 aaKnown RBP29.27■■■□□ 2.28
GFRA3-201ENST00000274721 ZFYVE9O95405 1425 aa29.27■■■□□ 2.28
GFRA3-201ENST00000274721 TMEM131LA2VDJ0 1609 aa29.27■■■□□ 2.28
GFRA3-201ENST00000274721 KTN1Q86UP2 1357 aaKnown RBP29.25■■■□□ 2.27
GFRA3-201ENST00000274721 ADGRB1O14514 1584 aa29.25■■■□□ 2.27
GFRA3-201ENST00000274721 SLC24A1O60721 1099 aa29.25■■■□□ 2.27
GFRA3-201ENST00000274721 MRS2Q9HD23 443 aa29.25■■■□□ 2.27
GFRA3-201ENST00000274721 CDCA8Q53HL2 280 aa29.23■■■□□ 2.27
GFRA3-201ENST00000274721 MLECQ14165 292 aa29.22■■■□□ 2.27
GFRA3-201ENST00000274721 SPATA31D1Q6ZQQ2 1576 aa29.22■■■□□ 2.27
GFRA3-201ENST00000274721 MYO5BQ9ULV0 1848 aa29.2■■■□□ 2.27
GFRA3-201ENST00000274721 MYO3AQ8NEV4 1616 aa29.2■■■□□ 2.27
GFRA3-201ENST00000274721 SBNO2Q9Y2G9 1366 aa29.2■■■□□ 2.26
GFRA3-201ENST00000274721 RALBP1Q15311 655 aa29.2■■■□□ 2.26
GFRA3-201ENST00000274721 PANK3Q9H999 370 aa29.18■■■□□ 2.26
GFRA3-201ENST00000274721 NUTM2DQ5VT03 806 aaPredicted RBP29.16■■■□□ 2.26
GFRA3-201ENST00000274721 ZMYM3Q14202 1370 aa29.15■■■□□ 2.26
GFRA3-201ENST00000274721 PARD3Q8TEW0 1356 aa29.13■■■□□ 2.25
GFRA3-201ENST00000274721 CNGB1Q14028 1251 aaPredicted RBP29.13■■■□□ 2.25
GFRA3-201ENST00000274721 TMEM132EQ6IEE7 984 aa29.13■■■□□ 2.25
GFRA3-201ENST00000274721 CENPJQ9HC77 1338 aaPredicted RBP29.12■■■□□ 2.25
GFRA3-201ENST00000274721 MYBBP1AQ9BQG0 1328 aaKnown RBP29.11■■■□□ 2.25
GFRA3-201ENST00000274721 TRAK1Q9UPV9 953 aa29.11■■■□□ 2.25
GFRA3-201ENST00000274721 HNRNPUQ00839 825 aaKnown RBP eCLIP29.1■■■□□ 2.25
GFRA3-201ENST00000274721 FAM9BQ8IZU0 186 aa29.1■■■□□ 2.25
GFRA3-201ENST00000274721 ESF1Q9H501 851 aaKnown RBP29.1■■■□□ 2.25
GFRA3-201ENST00000274721 A2ML1A8K2U0 1454 aa29.08■■■□□ 2.25
GFRA3-201ENST00000274721 KDM5AP29375 1690 aaKnown RBP29.08■■■□□ 2.25
GFRA3-201ENST00000274721 BRD4O60885 1362 aaPredicted RBP29.07■■■□□ 2.24
GFRA3-201ENST00000274721 MYOM1P52179 1685 aa29.06■■■□□ 2.24
GFRA3-201ENST00000274721 STAG3Q9UJ98 1225 aa29.06■■■□□ 2.24
GFRA3-201ENST00000274721 TRHP20396 242 aaPredicted RBP29.03■■■□□ 2.24
GFRA3-201ENST00000274721 PNISRQ8TF01 805 aaKnown RBP29.03■■■□□ 2.24
GFRA3-201ENST00000274721 TMC1Q8TDI8 760 aa29.02■■■□□ 2.24
GFRA3-201ENST00000274721 ASXL1Q8IXJ9 1541 aa29.02■■■□□ 2.24
GFRA3-201ENST00000274721 QRICH2Q9H0J4 1663 aa29.01■■■□□ 2.23
GFRA3-201ENST00000274721 NLRP13Q86W25 1043 aa29■■■□□ 2.23
GFRA3-201ENST00000274721 ARHGEF28Q8N1W1 1705 aaKnown RBP28.99■■■□□ 2.23
GFRA3-201ENST00000274721 CC2D1BQ5T0F9 858 aaKnown RBP28.98■■■□□ 2.23
GFRA3-201ENST00000274721 KNSTRNQ9Y448 316 aa28.98■■■□□ 2.23
GFRA3-201ENST00000274721 AMER1Q5JTC6 1135 aaPredicted RBP28.98■■■□□ 2.23
GFRA3-201ENST00000274721 RIMS2Q9UQ26 1411 aa28.96■■■□□ 2.23
GFRA3-201ENST00000274721 ALKQ9UM73 1620 aa28.95■■■□□ 2.23
GFRA3-201ENST00000274721 TNRQ92752 1358 aa28.95■■■□□ 2.23
GFRA3-201ENST00000274721 NPC1L1Q9UHC9 1359 aa28.95■■■□□ 2.23
GFRA3-201ENST00000274721 PUS7Q96PZ0 661 aaKnown RBP28.94■■■□□ 2.22
GFRA3-201ENST00000274721 LRPPRCP42704 1394 aaKnown RBP28.94■■■□□ 2.22
GFRA3-201ENST00000274721 ZBED9Q6R2W3 1325 aa28.93■■■□□ 2.22
GFRA3-201ENST00000274721 YTHDC2Q9H6S0 1430 aaKnown RBP28.91■■■□□ 2.22
GFRA3-201ENST00000274721 PTPRMP28827 1452 aa28.88■■■□□ 2.21
GFRA3-201ENST00000274721 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.88■■■□□ 2.21
GFRA3-201ENST00000274721 CARD14Q9BXL6 1004 aa28.87■■■□□ 2.21
GFRA3-201ENST00000274721 EVC2Q86UK5 1308 aa28.86■■■□□ 2.21
GFRA3-201ENST00000274721 STK26Q9P289 416 aa28.86■■■□□ 2.21
GFRA3-201ENST00000274721 TULP4Q9NRJ4 1543 aa28.86■■■□□ 2.21
GFRA3-201ENST00000274721 SENP3Q9H4L4 574 aaPredicted RBP28.86■■■□□ 2.21
GFRA3-201ENST00000274721 DNAJC5Q9H3Z4 198 aa28.84■■■□□ 2.21
GFRA3-201ENST00000274721 SETD1AO15047 1707 aaKnown RBP28.83■■■□□ 2.21
GFRA3-201ENST00000274721 HDGFP51858 240 aaKnown RBP28.82■■■□□ 2.2
GFRA3-201ENST00000274721 UBR1Q8IWV7 1749 aa28.82■■■□□ 2.2
GFRA3-201ENST00000274721 NLRP1Q9C000 1473 aa28.81■■■□□ 2.2
GFRA3-201ENST00000274721 SLC12A5Q9H2X9 1139 aa28.81■■■□□ 2.2
GFRA3-201ENST00000274721 NRXN3Q9Y4C0 1643 aa28.8■■■□□ 2.2
GFRA3-201ENST00000274721 TMEM2Q9UHN6 1383 aa28.79■■■□□ 2.2
GFRA3-201ENST00000274721 PPP2R1AP30153 589 aa28.79■■■□□ 2.2
GFRA3-201ENST00000274721 PRAM1Q96QH2 718 aa28.79■■■□□ 2.2
GFRA3-201ENST00000274721 CEBPAP49715 358 aaPredicted RBP28.79■■■□□ 2.2
GFRA3-201ENST00000274721 DLC1Q96QB1 1528 aa28.78■■■□□ 2.2
GFRA3-201ENST00000274721 SUPT16HQ9Y5B9 1047 aaKnown RBP28.77■■■□□ 2.2
GFRA3-201ENST00000274721 SAFB2Q14151 953 aaKnown RBP eCLIP28.77■■■□□ 2.2
GFRA3-201ENST00000274721 C3P01024 1663 aa28.77■■■□□ 2.2
GFRA3-201ENST00000274721 INSRP06213 1382 aa28.77■■■□□ 2.2
GFRA3-201ENST00000274721 ABCC11Q96J66 1382 aa28.76■■■□□ 2.19
GFRA3-201ENST00000274721 FER1L4A9Z1Z3 1794 aa28.75■■■□□ 2.19
GFRA3-201ENST00000274721 POGKQ9P215 609 aa28.75■■■□□ 2.19
GFRA3-201ENST00000274721 CABP2Q9NPB3 220 aa28.73■■■□□ 2.19
GFRA3-201ENST00000274721 NINLQ9Y2I6 1382 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms