RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ARHGAP31Q2M1Z3 1444 aa14.16□□□□□ -0.14
TPM3-201ENST00000271850 ARHGAP23Q9P227 1491 aa14.16□□□□□ -0.14
TPM3-201ENST00000271850 RRP7BPQ9NSQ0 103 aa14.15□□□□□ -0.14
TPM3-201ENST00000271850 LTKP29376 864 aa14.14□□□□□ -0.15
TPM3-201ENST00000271850 HSPA1LP34931 641 aa14.14□□□□□ -0.15
TPM3-201ENST00000271850 SLIT1O75093 1534 aa14.14□□□□□ -0.15
TPM3-201ENST00000271850 LRRC7Q96NW7 1537 aa14.14□□□□□ -0.15
TPM3-201ENST00000271850 SOCS7O14512 581 aa14.13□□□□□ -0.15
TPM3-201ENST00000271850 PIK3C2BO00750 1634 aa14.12□□□□□ -0.15
TPM3-201ENST00000271850 LMTK2Q8IWU2 1503 aa14.12□□□□□ -0.15
TPM3-201ENST00000271850 SCAF11Q99590 1463 aaKnown RBP14.12□□□□□ -0.15
TPM3-201ENST00000271850 SYNMO15061 1565 aa14.11□□□□□ -0.15
TPM3-201ENST00000271850 PIP4K2BP78356 416 aa14.1□□□□□ -0.15
TPM3-201ENST00000271850 MED1Q15648 1581 aaPredicted RBP14.09□□□□□ -0.15
TPM3-201ENST00000271850 CHIC2Q9UKJ5 165 aa14.09□□□□□ -0.15
TPM3-201ENST00000271850 ADGRL2O95490 1459 aa14.09□□□□□ -0.15
TPM3-201ENST00000271850 XIRP1Q702N8 1843 aaKnown RBP14.08□□□□□ -0.15
TPM3-201ENST00000271850 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
TPM3-201ENST00000271850 NOS1P29475 1434 aa14.07□□□□□ -0.16
TPM3-201ENST00000271850 EFCAB6Q5THR3 1501 aa14.07□□□□□ -0.16
TPM3-201ENST00000271850 TOM1O60784 492 aa14.07□□□□□ -0.16
TPM3-201ENST00000271850 ANKRD30AQ9BXX3 1397 aa14.06□□□□□ -0.16
TPM3-201ENST00000271850 TMEM2Q9UHN6 1383 aa14.06□□□□□ -0.16
TPM3-201ENST00000271850 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
TPM3-201ENST00000271850 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
TPM3-201ENST00000271850 IDI1Q13907 227 aa14.05□□□□□ -0.16
TPM3-201ENST00000271850 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
TPM3-201ENST00000271850 TET3O43151 1660 aa14.04□□□□□ -0.16
TPM3-201ENST00000271850 KDM5AP29375 1690 aaKnown RBP14.04□□□□□ -0.16
TPM3-201ENST00000271850 TXNDC2Q86VQ3 553 aa14.04□□□□□ -0.16
TPM3-201ENST00000271850 ADGRB3O60242 1522 aa14.02□□□□□ -0.16
TPM3-201ENST00000271850 KANK1Q14678 1352 aa14.01□□□□□ -0.17
TPM3-201ENST00000271850 ANKRD50Q9ULJ7 1429 aa13.99□□□□□ -0.17
TPM3-201ENST00000271850 ZFYVE9O95405 1425 aa13.98□□□□□ -0.17
TPM3-201ENST00000271850 NWD1Q149M9 1564 aa13.98□□□□□ -0.17
TPM3-201ENST00000271850 ZBTB22O15209 634 aa13.98□□□□□ -0.17
TPM3-201ENST00000271850 MYO5BQ9ULV0 1848 aa13.97□□□□□ -0.17
TPM3-201ENST00000271850 UNC13BO14795 1591 aa13.97□□□□□ -0.17
TPM3-201ENST00000271850 FAM50AQ14320 339 aaKnown RBP13.97□□□□□ -0.17
TPM3-201ENST00000271850 TMEM94Q12767 1356 aa13.96□□□□□ -0.17
TPM3-201ENST00000271850 RPRD2Q5VT52 1461 aaKnown RBP13.96□□□□□ -0.17
TPM3-201ENST00000271850 RBM33Q96EV2 1170 aaKnown RBP13.96□□□□□ -0.17
TPM3-201ENST00000271850 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.17
TPM3-201ENST00000271850 EID1Q9Y6B2 187 aa13.96□□□□□ -0.17
TPM3-201ENST00000271850 TMEM131LA2VDJ0 1609 aa13.95□□□□□ -0.18
TPM3-201ENST00000271850 GCC2Q8IWJ2 1684 aa13.95□□□□□ -0.18
TPM3-201ENST00000271850 KCNA6P17658 529 aa13.94□□□□□ -0.18
TPM3-201ENST00000271850 E9PCH4 1651 aa13.94□□□□□ -0.18
TPM3-201ENST00000271850 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
TPM3-201ENST00000271850 SLC52A1Q9NWF4 448 aa13.93□□□□□ -0.18
TPM3-201ENST00000271850 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
TPM3-201ENST00000271850 FAM135BQ49AJ0 1406 aa13.92□□□□□ -0.18
TPM3-201ENST00000271850 RGS17Q9UGC6 210 aaPredicted RBP13.92□□□□□ -0.18
TPM3-201ENST00000271850 NKTRP30414 1462 aaKnown RBP13.92□□□□□ -0.18
TPM3-201ENST00000271850 ROCK1Q13464 1354 aa13.91□□□□□ -0.18
TPM3-201ENST00000271850 ROBO1Q9Y6N7 1651 aa13.91□□□□□ -0.18
TPM3-201ENST00000271850 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.18
TPM3-201ENST00000271850 IQGAP3Q86VI3 1631 aa13.9□□□□□ -0.18
TPM3-201ENST00000271850 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
TPM3-201ENST00000271850 EVX2Q03828 476 aa13.9□□□□□ -0.18
TPM3-201ENST00000271850 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
TPM3-201ENST00000271850 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.18
TPM3-201ENST00000271850 ADAMTS13Q76LX8 1427 aa13.9□□□□□ -0.19
TPM3-201ENST00000271850 CHD2O14647 1828 aaKnown RBP13.89□□□□□ -0.19
TPM3-201ENST00000271850 PROSER2Q86WR7 435 aaPredicted RBP13.87□□□□□ -0.19
TPM3-201ENST00000271850 NUTM2DQ5VT03 806 aaPredicted RBP13.85□□□□□ -0.19
TPM3-201ENST00000271850 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
TPM3-201ENST00000271850 PTPRUQ92729 1446 aa13.84□□□□□ -0.19
TPM3-201ENST00000271850 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
TPM3-201ENST00000271850 NUP155O75694 1391 aa13.83□□□□□ -0.2
TPM3-201ENST00000271850 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
TPM3-201ENST00000271850 TBX22Q9Y458 520 aa13.82□□□□□ -0.2
TPM3-201ENST00000271850 DIP2AQ14689 1571 aa13.81□□□□□ -0.2
TPM3-201ENST00000271850 COL16A1Q07092 1604 aaPredicted RBP13.81□□□□□ -0.2
TPM3-201ENST00000271850 MSH6P52701 1360 aa13.81□□□□□ -0.2
TPM3-201ENST00000271850 CHGAP10645 457 aaKnown RBP13.8□□□□□ -0.2
TPM3-201ENST00000271850 ITGAEP38570 1179 aa13.8□□□□□ -0.2
TPM3-201ENST00000271850 POTEAQ6S8J7 498 aa13.8□□□□□ -0.2
TPM3-201ENST00000271850 PHLPP1O60346 1717 aa13.79□□□□□ -0.2
TPM3-201ENST00000271850 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.79□□□□□ -0.2
TPM3-201ENST00000271850 PPP1R15AO75807 674 aaPredicted RBP13.79□□□□□ -0.2
TPM3-201ENST00000271850 BCANQ96GW7 911 aa13.79□□□□□ -0.2
TPM3-201ENST00000271850 SLAIN2Q9P270 581 aa13.79□□□□□ -0.2
TPM3-201ENST00000271850 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
TPM3-201ENST00000271850 NCOA3Q9Y6Q9 1424 aa13.78□□□□□ -0.2
TPM3-201ENST00000271850 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
TPM3-201ENST00000271850 LRP6O75581 1613 aa13.77□□□□□ -0.21
TPM3-201ENST00000271850 CLTCL1P53675 1640 aa13.77□□□□□ -0.21
TPM3-201ENST00000271850 RRBP1Q9P2E9 1410 aaKnown RBP13.77□□□□□ -0.21
TPM3-201ENST00000271850 SETBP1Q9Y6X0 1596 aa13.77□□□□□ -0.21
TPM3-201ENST00000271850 TRPM2O94759 1503 aa13.76□□□□□ -0.21
TPM3-201ENST00000271850 PIK3R4Q99570 1358 aa13.76□□□□□ -0.21
TPM3-201ENST00000271850 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.76□□□□□ -0.21
TPM3-201ENST00000271850 SSUH2Q9Y2M2 353 aa13.76□□□□□ -0.21
TPM3-201ENST00000271850 NAIPQ13075 1403 aa13.75□□□□□ -0.21
TPM3-201ENST00000271850 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
TPM3-201ENST00000271850 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
TPM3-201ENST00000271850 NEXMIFQ5QGS0 1516 aa13.74□□□□□ -0.21
TPM3-201ENST00000271850 METP08581 1390 aa13.74□□□□□ -0.21
TPM3-201ENST00000271850 AMOTL2Q9Y2J4 779 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms