RNA–Protein interactions for RNA: ENST00000271640.9

SETDB1-201, Transcript of SET domain bifurcated 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SETDB1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-201ENST00000271640 TPRNQ4KMQ1 711 aa9.05□□□□□ -0.96
SETDB1-201ENST00000271640 CASC1Q6TDU7 716 aa9.05□□□□□ -0.96
SETDB1-201ENST00000271640 RUNDC1Q96C34 613 aa9.05□□□□□ -0.96
SETDB1-201ENST00000271640 DISP3Q9P2K9 1392 aa9.05□□□□□ -0.96
SETDB1-201ENST00000271640 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
SETDB1-201ENST00000271640 PARD3Q8TEW0 1356 aa9.05□□□□□ -0.96
SETDB1-201ENST00000271640 PZPP20742 1482 aa9.05□□□□□ -0.96
SETDB1-201ENST00000271640 NUTM2DQ5VT03 806 aaPredicted RBP9.04□□□□□ -0.96
SETDB1-201ENST00000271640 DZIP1LQ8IYY4 767 aaKnown RBP9.04□□□□□ -0.96
SETDB1-201ENST00000271640 FAM43AQ8N2R8 423 aa9.04□□□□□ -0.96
SETDB1-201ENST00000271640 C22orf23Q9BZE7 217 aa9.04□□□□□ -0.96
SETDB1-201ENST00000271640 TCP11L2Q8N4U5 519 aa9.04□□□□□ -0.96
SETDB1-201ENST00000271640 PLEKHH2Q8IVE3 1493 aa9.04□□□□□ -0.96
SETDB1-201ENST00000271640 GPATCH8Q9UKJ3 1502 aaKnown RBP9.04□□□□□ -0.96
SETDB1-201ENST00000271640 SAMD9Q5K651 1589 aa9.04□□□□□ -0.96
SETDB1-201ENST00000271640 CFAP70Q5T0N1 1121 aa9.04□□□□□ -0.96
SETDB1-201ENST00000271640 APBB1O00213 710 aa9.03□□□□□ -0.96
SETDB1-201ENST00000271640 ARHGAP5Q13017 1502 aa9.03□□□□□ -0.96
SETDB1-201ENST00000271640 HSP90AA2PQ14568 343 aaPredicted RBP9.02□□□□□ -0.96
SETDB1-201ENST00000271640 DNTTIP2Q5QJE6 756 aaKnown RBP9.02□□□□□ -0.96
SETDB1-201ENST00000271640 NUP153P49790 1475 aaKnown RBP9.02□□□□□ -0.96
SETDB1-201ENST00000271640 WDR62O43379 1518 aa9.02□□□□□ -0.97
SETDB1-201ENST00000271640 DNMT1P26358 1616 aaKnown RBP9.02□□□□□ -0.97
SETDB1-201ENST00000271640 MRC2Q9UBG0 1479 aa9.02□□□□□ -0.97
SETDB1-201ENST00000271640 C8orf34Q49A92 452 aa9.02□□□□□ -0.97
SETDB1-201ENST00000271640 SYNJ2O15056 1496 aa9.01□□□□□ -0.97
SETDB1-201ENST00000271640 PTMSP20962 102 aa9.01□□□□□ -0.97
SETDB1-201ENST00000271640 ANKRD45Q5TZF3 282 aa9.01□□□□□ -0.97
SETDB1-201ENST00000271640 DDX19BQ9UMR2 479 aa9.01□□□□□ -0.97
SETDB1-201ENST00000271640 TRAK2O60296 914 aa9.01□□□□□ -0.97
SETDB1-201ENST00000271640 MTHFSP49914 203 aa9.01□□□□□ -0.97
SETDB1-201ENST00000271640 IFT140Q96RY7 1462 aa9.01□□□□□ -0.97
SETDB1-201ENST00000271640 PER1O15534 1290 aaPredicted RBP9.01□□□□□ -0.97
SETDB1-201ENST00000271640 IGHDP01880 384 aa9□□□□□ -0.97
SETDB1-201ENST00000271640 LNPKQ9C0E8 428 aa9□□□□□ -0.97
SETDB1-201ENST00000271640 MAGI1Q96QZ7 1491 aaPredicted RBP9□□□□□ -0.97
SETDB1-201ENST00000271640 AAMPQ13685 434 aa9□□□□□ -0.97
SETDB1-201ENST00000271640 KIF14Q15058 1648 aa9□□□□□ -0.97
SETDB1-201ENST00000271640 NKTRP30414 1462 aaKnown RBP9□□□□□ -0.97
SETDB1-201ENST00000271640 WWC1Q8IX03 1113 aa9□□□□□ -0.97
SETDB1-201ENST00000271640 RAPGEF6Q8TEU7 1601 aa9□□□□□ -0.97
SETDB1-201ENST00000271640 ELL2O00472 640 aaPredicted RBP9□□□□□ -0.97
SETDB1-201ENST00000271640 STAC3Q96MF2 364 aa9□□□□□ -0.97
SETDB1-201ENST00000271640 CCDC141Q6ZP82 1450 aa8.99□□□□□ -0.97
SETDB1-201ENST00000271640 DDX49Q9Y6V7 483 aaKnown RBP8.99□□□□□ -0.97
SETDB1-201ENST00000271640 KDM5BQ9UGL1 1544 aa8.99□□□□□ -0.97
SETDB1-201ENST00000271640 CALD1Q05682 793 aaKnown RBP8.99□□□□□ -0.97
SETDB1-201ENST00000271640 HDGFL2Q7Z4V5 671 aaPredicted RBP8.99□□□□□ -0.97
SETDB1-201ENST00000271640 VSIG10Q8N0Z9 540 aa8.99□□□□□ -0.97
SETDB1-201ENST00000271640 AFAP1Q8N556 730 aa8.99□□□□□ -0.97
SETDB1-201ENST00000271640 PLEKHH1Q9ULM0 1364 aa8.99□□□□□ -0.97
SETDB1-201ENST00000271640 PRAG1Q86YV5 1406 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 MRE11P49959 708 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 ZBTB7CA1YPR0 619 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 TESK2Q96S53 571 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 SLC12A5Q9H2X9 1139 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 ZNF608Q9ULD9 1512 aaPredicted RBP8.98□□□□□ -0.97
SETDB1-201ENST00000271640 GRIN2AQ12879 1464 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 PLCB2Q00722 1185 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 TSR2Q969E8 191 aaKnown RBP8.98□□□□□ -0.97
SETDB1-201ENST00000271640 NINLQ9Y2I6 1382 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 UHRF1BP1Q6BDS2 1440 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 MCM4P33991 863 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 ARID3AQ99856 593 aa8.98□□□□□ -0.97
SETDB1-201ENST00000271640 KIF21AQ7Z4S6 1674 aa8.97□□□□□ -0.97
SETDB1-201ENST00000271640 ITSN2Q9NZM3 1697 aa8.97□□□□□ -0.97
SETDB1-201ENST00000271640 DENND4BO75064 1496 aaPredicted RBP8.97□□□□□ -0.97
SETDB1-201ENST00000271640 TMEM132EQ6IEE7 984 aa8.97□□□□□ -0.97
SETDB1-201ENST00000271640 RIPK4P57078 832 aa8.97□□□□□ -0.97
SETDB1-201ENST00000271640 SKOR2Q2VWA4 1001 aaPredicted RBP8.97□□□□□ -0.97
SETDB1-201ENST00000271640 ESF1Q9H501 851 aaKnown RBP8.97□□□□□ -0.97
SETDB1-201ENST00000271640 TERF2IPQ9NYB0 399 aa8.97□□□□□ -0.97
SETDB1-201ENST00000271640 ARHGEF12Q9NZN5 1544 aa8.97□□□□□ -0.97
SETDB1-201ENST00000271640 EXOSC9Q06265 439 aaKnown RBP8.97□□□□□ -0.97
SETDB1-201ENST00000271640 EVC2Q86UK5 1308 aa8.97□□□□□ -0.97
SETDB1-201ENST00000271640 TBC1D2Q9BYX2 928 aa8.96□□□□□ -0.97
SETDB1-201ENST00000271640 CFAP44Q96MT7 982 aa8.96□□□□□ -0.97
SETDB1-201ENST00000271640 RARSP54136 660 aaKnown RBP8.96□□□□□ -0.98
SETDB1-201ENST00000271640 MVPQ14764 893 aaKnown RBP8.96□□□□□ -0.98
SETDB1-201ENST00000271640 AMER1Q5JTC6 1135 aaPredicted RBP8.96□□□□□ -0.98
SETDB1-201ENST00000271640 KDM2BQ8NHM5 1336 aa8.96□□□□□ -0.98
SETDB1-201ENST00000271640 ABCA5Q8WWZ7 1642 aa8.95□□□□□ -0.98
SETDB1-201ENST00000271640 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
SETDB1-201ENST00000271640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.95□□□□□ -0.98
SETDB1-201ENST00000271640 FOXD4L4Q8WXT5 416 aaPredicted RBP8.95□□□□□ -0.98
SETDB1-201ENST00000271640 GGNBP2Q9H3C7 697 aa8.95□□□□□ -0.98
SETDB1-201ENST00000271640 KDM5CP41229 1560 aa8.95□□□□□ -0.98
SETDB1-201ENST00000271640 WDR63Q8IWG1 891 aa8.95□□□□□ -0.98
SETDB1-201ENST00000271640 SCAPERQ9BY12 1400 aa8.95□□□□□ -0.98
SETDB1-201ENST00000271640 KIF16BQ96L93 1317 aa8.94□□□□□ -0.98
SETDB1-201ENST00000271640 KIAA0556O60303 1618 aa8.94□□□□□ -0.98
SETDB1-201ENST00000271640 SEC24BO95487 1268 aa8.94□□□□□ -0.98
SETDB1-201ENST00000271640 SPINK5Q9NQ38 1064 aaPredicted RBP8.94□□□□□ -0.98
SETDB1-201ENST00000271640 SOX12O15370 315 aa8.94□□□□□ -0.98
SETDB1-201ENST00000271640 FAM135AQ9P2D6 1515 aa8.93□□□□□ -0.98
SETDB1-201ENST00000271640 GRPEL1Q9HAV7 217 aa8.93□□□□□ -0.98
SETDB1-201ENST00000271640 CABP2Q9NPB3 220 aa8.93□□□□□ -0.98
SETDB1-201ENST00000271640 NOB1Q9ULX3 412 aaKnown RBP8.93□□□□□ -0.98
SETDB1-201ENST00000271640 ADAMTS12P58397 1594 aa8.93□□□□□ -0.98
SETDB1-201ENST00000271640 DIAPH1O60610 1272 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms