RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ANP32AP39687 249 aaKnown RBP21.41■■□□□ 1.02
MAP1LC3B-201ENST00000268607 BCORL1Q5H9F3 1711 aa21.41■■□□□ 1.02
MAP1LC3B-201ENST00000268607 DEPDC5O75140 1603 aa21.4■■□□□ 1.02
MAP1LC3B-201ENST00000268607 UHRF1BP1Q6BDS2 1440 aa21.39■■□□□ 1.01
MAP1LC3B-201ENST00000268607 PRDM15P57071 1507 aaPredicted RBP21.38■■□□□ 1.01
MAP1LC3B-201ENST00000268607 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
MAP1LC3B-201ENST00000268607 NPATQ14207 1427 aa21.37■■□□□ 1.01
MAP1LC3B-201ENST00000268607 ROCK2O75116 1388 aaKnown RBP21.37■■□□□ 1.01
MAP1LC3B-201ENST00000268607 SIGLEC1Q9BZZ2 1709 aa21.36■■□□□ 1.01
MAP1LC3B-201ENST00000268607 RALGAPBQ86X10 1494 aa21.36■■□□□ 1.01
MAP1LC3B-201ENST00000268607 VWDEQ8N2E2 1590 aa21.35■■□□□ 1.01
MAP1LC3B-201ENST00000268607 SENP3-EIF4A1A0A087X0R7 540 aa21.34■■□□□ 1.01
MAP1LC3B-201ENST00000268607 EIF2AK4Q9P2K8 1649 aaKnown RBP21.34■■□□□ 1.01
MAP1LC3B-201ENST00000268607 TET3O43151 1660 aa21.33■■□□□ 1
MAP1LC3B-201ENST00000268607 CLTCL1P53675 1640 aa21.32■■□□□ 1
MAP1LC3B-201ENST00000268607 ABCC3O15438 1527 aa21.3■■□□□ 1
MAP1LC3B-201ENST00000268607 EFCAB6Q5THR3 1501 aa21.3■■□□□ 1
MAP1LC3B-201ENST00000268607 PTPRTO14522 1441 aa21.29■■□□□ 1
MAP1LC3B-201ENST00000268607 IDI1Q13907 227 aa21.29■■□□□ 1
MAP1LC3B-201ENST00000268607 SPHKAPQ2M3C7 1700 aa21.29■■□□□ 1
MAP1LC3B-201ENST00000268607 POLR1AO95602 1720 aaPredicted RBP21.28■■□□□ 1
MAP1LC3B-201ENST00000268607 SMG6Q86US8 1419 aaKnown RBP21.28■■□□□ 1
MAP1LC3B-201ENST00000268607 PRAG1Q86YV5 1406 aa21.28■■□□□ 1
MAP1LC3B-201ENST00000268607 RNF17Q9BXT8 1623 aaKnown RBP21.28■■□□□ 1
MAP1LC3B-201ENST00000268607 ZMYM4Q5VZL5 1548 aa21.27■■□□□ 1
MAP1LC3B-201ENST00000268607 ADGRF5Q8IZF2 1346 aa21.27■■□□□ 1
MAP1LC3B-201ENST00000268607 CEBPAP49715 358 aaPredicted RBP21.26■□□□□ 0.99
MAP1LC3B-201ENST00000268607 TRPM2O94759 1503 aa21.26■□□□□ 0.99
MAP1LC3B-201ENST00000268607 NUDCQ9Y266 331 aa21.25■□□□□ 0.99
MAP1LC3B-201ENST00000268607 CFAP70Q5T0N1 1121 aa21.24■□□□□ 0.99
MAP1LC3B-201ENST00000268607 ESF1Q9H501 851 aaKnown RBP21.23■□□□□ 0.99
MAP1LC3B-201ENST00000268607 RNF123Q5XPI4 1314 aa21.22■□□□□ 0.99
MAP1LC3B-201ENST00000268607 EIF5BO60841 1220 aaKnown RBP21.22■□□□□ 0.99
MAP1LC3B-201ENST00000268607 NPM2Q86SE8 214 aaKnown RBP21.22■□□□□ 0.99
MAP1LC3B-201ENST00000268607 CAMSAP1Q5T5Y3 1602 aa21.2■□□□□ 0.98
MAP1LC3B-201ENST00000268607 NEFMP07197 916 aa21.2■□□□□ 0.98
MAP1LC3B-201ENST00000268607 LMTK2Q8IWU2 1503 aa21.18■□□□□ 0.98
MAP1LC3B-201ENST00000268607 TMEM132EQ6IEE7 984 aa21.18■□□□□ 0.98
MAP1LC3B-201ENST00000268607 LAS1LQ9Y4W2 734 aaKnown RBP21.18■□□□□ 0.98
MAP1LC3B-201ENST00000268607 STAG3Q9UJ98 1225 aa21.18■□□□□ 0.98
MAP1LC3B-201ENST00000268607 TRPM1Q7Z4N2 1603 aa21.17■□□□□ 0.98
MAP1LC3B-201ENST00000268607 TMC1Q8TDI8 760 aa21.17■□□□□ 0.98
MAP1LC3B-201ENST00000268607 NOS1P29475 1434 aa21.16■□□□□ 0.98
MAP1LC3B-201ENST00000268607 MROH2AA6NES4 1674 aa21.16■□□□□ 0.98
MAP1LC3B-201ENST00000268607 ARHGEF40Q8TER5 1519 aa21.15■□□□□ 0.98
MAP1LC3B-201ENST00000268607 BRPF3Q9ULD4 1205 aa21.14■□□□□ 0.98
MAP1LC3B-201ENST00000268607 CLTCQ00610 1675 aaKnown RBP21.14■□□□□ 0.97
MAP1LC3B-201ENST00000268607 SYNMO15061 1565 aa21.14■□□□□ 0.97
MAP1LC3B-201ENST00000268607 TESK2Q96S53 571 aa21.13■□□□□ 0.97
MAP1LC3B-201ENST00000268607 DISP3Q9P2K9 1392 aa21.13■□□□□ 0.97
MAP1LC3B-201ENST00000268607 ZMYM3Q14202 1370 aa21.12■□□□□ 0.97
MAP1LC3B-201ENST00000268607 GPRASP1Q5JY77 1395 aa21.11■□□□□ 0.97
MAP1LC3B-201ENST00000268607 KIF1BO60333 1816 aa21.1■□□□□ 0.97
MAP1LC3B-201ENST00000268607 PNISRQ8TF01 805 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3B-201ENST00000268607 CC2D1BQ5T0F9 858 aaKnown RBP21.09■□□□□ 0.97
MAP1LC3B-201ENST00000268607 USP35Q9P2H5 1018 aa21.09■□□□□ 0.97
MAP1LC3B-201ENST00000268607 TRAK1Q9UPV9 953 aa21.08■□□□□ 0.97
MAP1LC3B-201ENST00000268607 SAFB2Q14151 953 aaKnown RBP eCLIP21.07■□□□□ 0.96
MAP1LC3B-201ENST00000268607 PANK3Q9H999 370 aa21.07■□□□□ 0.96
MAP1LC3B-201ENST00000268607 STK26Q9P289 416 aa21.06■□□□□ 0.96
MAP1LC3B-201ENST00000268607 AGLP35573 1532 aa21.06■□□□□ 0.96
MAP1LC3B-201ENST00000268607 SLC52A1Q9NWF4 448 aa21.05■□□□□ 0.96
MAP1LC3B-201ENST00000268607 PER1O15534 1290 aaPredicted RBP21.05■□□□□ 0.96
MAP1LC3B-201ENST00000268607 PDE4AP27815 886 aa21.05■□□□□ 0.96
MAP1LC3B-201ENST00000268607 TMF1P82094 1093 aa21.05■□□□□ 0.96
MAP1LC3B-201ENST00000268607 ARHGAP31Q2M1Z3 1444 aa21.05■□□□□ 0.96
MAP1LC3B-201ENST00000268607 MADDQ8WXG6 1647 aa21.04■□□□□ 0.96
MAP1LC3B-201ENST00000268607 MYBBP1AQ9BQG0 1328 aaKnown RBP21.04■□□□□ 0.96
MAP1LC3B-201ENST00000268607 PREX1Q8TCU6 1659 aa21.04■□□□□ 0.96
MAP1LC3B-201ENST00000268607 MYO5BQ9ULV0 1848 aa21.04■□□□□ 0.96
MAP1LC3B-201ENST00000268607 EXOC6Q8TAG9 804 aa21.03■□□□□ 0.96
MAP1LC3B-201ENST00000268607 ERVK-7P63135 1459 aa21.03■□□□□ 0.96
MAP1LC3B-201ENST00000268607 RALBP1Q15311 655 aa21.03■□□□□ 0.96
MAP1LC3B-201ENST00000268607 TCERG1O14776 1098 aaKnown RBP21.02■□□□□ 0.96
MAP1LC3B-201ENST00000268607 ADGRB3O60242 1522 aa21.02■□□□□ 0.96
MAP1LC3B-201ENST00000268607 REREQ9P2R6 1566 aa21■□□□□ 0.95
MAP1LC3B-201ENST00000268607 KTN1Q86UP2 1357 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3B-201ENST00000268607 BACH2Q9BYV9 841 aa20.99■□□□□ 0.95
MAP1LC3B-201ENST00000268607 ZC3H13Q5T200 1668 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3B-201ENST00000268607 RRP1P56182 461 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3B-201ENST00000268607 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
MAP1LC3B-201ENST00000268607 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
MAP1LC3B-201ENST00000268607 PIK3C2BO00750 1634 aa20.97■□□□□ 0.95
MAP1LC3B-201ENST00000268607 PPM1GO15355 546 aaPredicted RBP20.97■□□□□ 0.95
MAP1LC3B-201ENST00000268607 GSE1Q14687 1217 aa20.96■□□□□ 0.95
MAP1LC3B-201ENST00000268607 BRD4O60885 1362 aaPredicted RBP20.95■□□□□ 0.94
MAP1LC3B-201ENST00000268607 NLRP13Q86W25 1043 aa20.95■□□□□ 0.94
MAP1LC3B-201ENST00000268607 C14orf93Q9H972 538 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3B-201ENST00000268607 PARD3Q8TEW0 1356 aa20.94■□□□□ 0.94
MAP1LC3B-201ENST00000268607 PKNOX2Q96KN3 472 aa20.93■□□□□ 0.94
MAP1LC3B-201ENST00000268607 LAMC1P11047 1609 aa20.92■□□□□ 0.94
MAP1LC3B-201ENST00000268607 PIK3C2GO75747 1445 aa20.92■□□□□ 0.94
MAP1LC3B-201ENST00000268607 TMEM131LA2VDJ0 1609 aa20.92■□□□□ 0.94
MAP1LC3B-201ENST00000268607 NEXMIFQ5QGS0 1516 aa20.91■□□□□ 0.94
MAP1LC3B-201ENST00000268607 PPLO60437 1756 aa20.91■□□□□ 0.94
MAP1LC3B-201ENST00000268607 TNRQ92752 1358 aa20.91■□□□□ 0.94
MAP1LC3B-201ENST00000268607 IFT172Q9UG01 1749 aa20.91■□□□□ 0.94
MAP1LC3B-201ENST00000268607 RCAN3Q9UKA8 241 aa20.91■□□□□ 0.94
MAP1LC3B-201ENST00000268607 RPGRIP1LQ68CZ1 1315 aa20.9■□□□□ 0.94
MAP1LC3B-201ENST00000268607 MS4A1P11836 297 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms