RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 ZNF335Q9H4Z2 1342 aaPredicted RBP18.68■□□□□ 0.58
SGCE-201ENST00000265735 CERKQ8TCT0 537 aa18.67■□□□□ 0.58
SGCE-201ENST00000265735 RIMS2Q9UQ26 1411 aa18.67■□□□□ 0.58
SGCE-201ENST00000265735 CHGAP10645 457 aaKnown RBP18.66■□□□□ 0.58
SGCE-201ENST00000265735 FOXD1Q16676 465 aa18.66■□□□□ 0.58
SGCE-201ENST00000265735 KIF1BO60333 1816 aa18.66■□□□□ 0.58
SGCE-201ENST00000265735 HDGFP51858 240 aaKnown RBP18.65■□□□□ 0.58
SGCE-201ENST00000265735 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.63■□□□□ 0.57
SGCE-201ENST00000265735 PLEKHG1Q9ULL1 1385 aa18.62■□□□□ 0.57
SGCE-201ENST00000265735 CCER1Q8TC90 406 aaPredicted RBP18.61■□□□□ 0.57
SGCE-201ENST00000265735 CPS1P31327 1500 aa18.6■□□□□ 0.57
SGCE-201ENST00000265735 STRCP1A6NGW2 1772 aa18.6■□□□□ 0.57
SGCE-201ENST00000265735 IQSEC2Q5JU85 1478 aa18.6■□□□□ 0.57
SGCE-201ENST00000265735 SENP3Q9H4L4 574 aaPredicted RBP18.59■□□□□ 0.57
SGCE-201ENST00000265735 NEXMIFQ5QGS0 1516 aa18.58■□□□□ 0.57
SGCE-201ENST00000265735 CCDC144AA2RUR9 1427 aa18.58■□□□□ 0.56
SGCE-201ENST00000265735 FBXO41Q8TF61 875 aa18.57■□□□□ 0.56
SGCE-201ENST00000265735 PPP1R15AO75807 674 aaPredicted RBP18.57■□□□□ 0.56
SGCE-201ENST00000265735 SLC26A8Q96RN1 970 aa18.57■□□□□ 0.56
SGCE-201ENST00000265735 ZNF326Q5BKZ1 582 aaKnown RBP18.56■□□□□ 0.56
SGCE-201ENST00000265735 NUTM2DQ5VT03 806 aaPredicted RBP18.56■□□□□ 0.56
SGCE-201ENST00000265735 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
SGCE-201ENST00000265735 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
SGCE-201ENST00000265735 TBX22Q9Y458 520 aa18.54■□□□□ 0.56
SGCE-201ENST00000265735 RPGRIP1LQ68CZ1 1315 aa18.54■□□□□ 0.56
SGCE-201ENST00000265735 ANKRD30BQ9BXX2 1392 aa18.54■□□□□ 0.56
SGCE-201ENST00000265735 ILDR1Q86SU0 546 aaPredicted RBP18.54■□□□□ 0.56
SGCE-201ENST00000265735 DIP2AQ14689 1571 aa18.53■□□□□ 0.56
SGCE-201ENST00000265735 SETBP1Q9Y6X0 1596 aa18.53■□□□□ 0.56
SGCE-201ENST00000265735 NRXN3Q9Y4C0 1643 aa18.53■□□□□ 0.56
SGCE-201ENST00000265735 PPLO60437 1756 aa18.52■□□□□ 0.56
SGCE-201ENST00000265735 BCANQ96GW7 911 aa18.52■□□□□ 0.56
SGCE-201ENST00000265735 CHD2O14647 1828 aaKnown RBP18.52■□□□□ 0.55
SGCE-201ENST00000265735 LRRC7Q96NW7 1537 aa18.51■□□□□ 0.55
SGCE-201ENST00000265735 NWD1Q149M9 1564 aa18.51■□□□□ 0.55
SGCE-201ENST00000265735 KCNA6P17658 529 aa18.5■□□□□ 0.55
SGCE-201ENST00000265735 IFT172Q9UG01 1749 aa18.49■□□□□ 0.55
SGCE-201ENST00000265735 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
SGCE-201ENST00000265735 PIK3R4Q99570 1358 aa18.49■□□□□ 0.55
SGCE-201ENST00000265735 XIRP1Q702N8 1843 aaKnown RBP18.47■□□□□ 0.55
SGCE-201ENST00000265735 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
SGCE-201ENST00000265735 RGL3Q3MIN7 710 aa18.45■□□□□ 0.54
SGCE-201ENST00000265735 SETD1AO15047 1707 aaKnown RBP18.44■□□□□ 0.54
SGCE-201ENST00000265735 PTPRUQ92729 1446 aa18.42■□□□□ 0.54
SGCE-201ENST00000265735 METP08581 1390 aa18.42■□□□□ 0.54
SGCE-201ENST00000265735 ALKQ9UM73 1620 aa18.41■□□□□ 0.54
SGCE-201ENST00000265735 ADGRF5Q8IZF2 1346 aa18.41■□□□□ 0.54
SGCE-201ENST00000265735 XRN1Q8IZH2 1706 aaKnown RBP18.4■□□□□ 0.54
SGCE-201ENST00000265735 TMEM94Q12767 1356 aa18.4■□□□□ 0.54
SGCE-201ENST00000265735 PROSER2Q86WR7 435 aaPredicted RBP18.4■□□□□ 0.54
SGCE-201ENST00000265735 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
SGCE-201ENST00000265735 MYOM2P54296 1465 aa18.38■□□□□ 0.53
SGCE-201ENST00000265735 AMOTL2Q9Y2J4 779 aa18.38■□□□□ 0.53
SGCE-201ENST00000265735 NRXN1Q9ULB1 1477 aa18.38■□□□□ 0.53
SGCE-201ENST00000265735 PIK3C2GO75747 1445 aa18.38■□□□□ 0.53
SGCE-201ENST00000265735 NCOA3Q9Y6Q9 1424 aa18.37■□□□□ 0.53
SGCE-201ENST00000265735 TOM1O60784 492 aa18.37■□□□□ 0.53
SGCE-201ENST00000265735 RBM33Q96EV2 1170 aaKnown RBP18.34■□□□□ 0.53
SGCE-201ENST00000265735 DHX57Q6P158 1386 aaKnown RBP18.34■□□□□ 0.53
SGCE-201ENST00000265735 PRAG1Q86YV5 1406 aa18.34■□□□□ 0.53
SGCE-201ENST00000265735 STAC3Q96MF2 364 aa18.33■□□□□ 0.52
SGCE-201ENST00000265735 CLSPNQ9HAW4 1339 aa18.31■□□□□ 0.52
SGCE-201ENST00000265735 C14orf93Q9H972 538 aaKnown RBP18.31■□□□□ 0.52
SGCE-201ENST00000265735 LAMC1P11047 1609 aa18.3■□□□□ 0.52
SGCE-201ENST00000265735 ASXL1Q8IXJ9 1541 aa18.3■□□□□ 0.52
SGCE-201ENST00000265735 MSH6P52701 1360 aa18.3■□□□□ 0.52
SGCE-201ENST00000265735 PTCH1Q13635 1447 aa18.29■□□□□ 0.52
SGCE-201ENST00000265735 DCAF11Q8TEB1 546 aa18.29■□□□□ 0.52
SGCE-201ENST00000265735 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.28■□□□□ 0.52
SGCE-201ENST00000265735 PIP4K2BP78356 416 aa18.27■□□□□ 0.52
SGCE-201ENST00000265735 C19orf44Q9H6X5 657 aa18.27■□□□□ 0.52
SGCE-201ENST00000265735 TECPR2O15040 1411 aa18.27■□□□□ 0.51
SGCE-201ENST00000265735 CFAP70Q5T0N1 1121 aa18.26■□□□□ 0.51
SGCE-201ENST00000265735 ROBO2Q9HCK4 1378 aa18.26■□□□□ 0.51
SGCE-201ENST00000265735 KNDC1Q76NI1 1749 aa18.26■□□□□ 0.51
SGCE-201ENST00000265735 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
SGCE-201ENST00000265735 KDM2AQ9Y2K7 1162 aa18.25■□□□□ 0.51
SGCE-201ENST00000265735 LRPPRCP42704 1394 aaKnown RBP18.25■□□□□ 0.51
SGCE-201ENST00000265735 TMEM132EQ6IEE7 984 aa18.25■□□□□ 0.51
SGCE-201ENST00000265735 ABCC11Q96J66 1382 aa18.25■□□□□ 0.51
SGCE-201ENST00000265735 DCCP43146 1447 aa18.23■□□□□ 0.51
SGCE-201ENST00000265735 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
SGCE-201ENST00000265735 YTHDC2Q9H6S0 1430 aaKnown RBP18.23■□□□□ 0.51
SGCE-201ENST00000265735 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
SGCE-201ENST00000265735 ADGRB1O14514 1584 aa18.23■□□□□ 0.51
SGCE-201ENST00000265735 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
SGCE-201ENST00000265735 C14orf37Q86TY3 774 aa18.22■□□□□ 0.51
SGCE-201ENST00000265735 ADGRL3Q9HAR2 1447 aa18.22■□□□□ 0.51
SGCE-201ENST00000265735 CADPS2Q86UW7 1296 aa18.22■□□□□ 0.51
SGCE-201ENST00000265735 SLAIN2Q9P270 581 aa18.22■□□□□ 0.51
SGCE-201ENST00000265735 SIRT1Q96EB6 747 aa18.2■□□□□ 0.5
SGCE-201ENST00000265735 ROBO1Q9Y6N7 1651 aa18.19■□□□□ 0.5
SGCE-201ENST00000265735 ATF3P18847 181 aa18.19■□□□□ 0.5
SGCE-201ENST00000265735 STK26Q9P289 416 aa18.19■□□□□ 0.5
SGCE-201ENST00000265735 L3MBTL2Q969R5 705 aa18.18■□□□□ 0.5
SGCE-201ENST00000265735 KIAA1210Q9ULL0 1709 aa18.18■□□□□ 0.5
SGCE-201ENST00000265735 HSPA1LP34931 641 aa18.18■□□□□ 0.5
SGCE-201ENST00000265735 NEUROD1Q13562 356 aa18.18■□□□□ 0.5
SGCE-201ENST00000265735 DLC1Q96QB1 1528 aa18.16■□□□□ 0.5
SGCE-201ENST00000265735 WAPLQ7Z5K2 1190 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms