RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
ERCC8-201ENST00000265038 POLR1AO95602 1720 aaPredicted RBP12.49□□□□□ -0.41
ERCC8-201ENST00000265038 SLC26A8Q96RN1 970 aa12.49□□□□□ -0.41
ERCC8-201ENST00000265038 SENP3Q9H4L4 574 aaPredicted RBP12.49□□□□□ -0.41
ERCC8-201ENST00000265038 PPP1R15AO75807 674 aaPredicted RBP12.48□□□□□ -0.41
ERCC8-201ENST00000265038 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
ERCC8-201ENST00000265038 FBXO41Q8TF61 875 aa12.48□□□□□ -0.41
ERCC8-201ENST00000265038 PLEKHG1Q9ULL1 1385 aa12.48□□□□□ -0.41
ERCC8-201ENST00000265038 SPHKAPQ2M3C7 1700 aa12.47□□□□□ -0.41
ERCC8-201ENST00000265038 CLTCL1P53675 1640 aa12.47□□□□□ -0.41
ERCC8-201ENST00000265038 BCANQ96GW7 911 aa12.47□□□□□ -0.41
ERCC8-201ENST00000265038 IQGAP1P46940 1657 aa12.47□□□□□ -0.41
ERCC8-201ENST00000265038 TBX22Q9Y458 520 aa12.44□□□□□ -0.42
ERCC8-201ENST00000265038 CCDC144AA2RUR9 1427 aa12.44□□□□□ -0.42
ERCC8-201ENST00000265038 KCNA6P17658 529 aa12.43□□□□□ -0.42
ERCC8-201ENST00000265038 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
ERCC8-201ENST00000265038 ADAMTS13Q76LX8 1427 aa12.43□□□□□ -0.42
ERCC8-201ENST00000265038 ANKRD30BQ9BXX2 1392 aa12.42□□□□□ -0.42
ERCC8-201ENST00000265038 CPS1P31327 1500 aa12.42□□□□□ -0.42
ERCC8-201ENST00000265038 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
ERCC8-201ENST00000265038 RGL3Q3MIN7 710 aa12.42□□□□□ -0.42
ERCC8-201ENST00000265038 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
ERCC8-201ENST00000265038 SPATA31E1Q6ZUB1 1445 aa12.41□□□□□ -0.42
ERCC8-201ENST00000265038 IQSEC2Q5JU85 1478 aa12.41□□□□□ -0.42
ERCC8-201ENST00000265038 VGFO15240 615 aaPredicted RBP12.4□□□□□ -0.42
ERCC8-201ENST00000265038 NEXMIFQ5QGS0 1516 aa12.4□□□□□ -0.42
ERCC8-201ENST00000265038 LRRC7Q96NW7 1537 aa12.4□□□□□ -0.42
ERCC8-201ENST00000265038 UBAP1LF5GYI3 381 aa12.37□□□□□ -0.43
ERCC8-201ENST00000265038 RBM33Q96EV2 1170 aaKnown RBP12.37□□□□□ -0.43
ERCC8-201ENST00000265038 ADGRF5Q8IZF2 1346 aa12.37□□□□□ -0.43
ERCC8-201ENST00000265038 STRCP1A6NGW2 1772 aa12.37□□□□□ -0.43
ERCC8-201ENST00000265038 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
ERCC8-201ENST00000265038 PTPRUQ92729 1446 aa12.36□□□□□ -0.43
ERCC8-201ENST00000265038 METP08581 1390 aa12.36□□□□□ -0.43
ERCC8-201ENST00000265038 PIK3R4Q99570 1358 aa12.36□□□□□ -0.43
ERCC8-201ENST00000265038 AMOTL2Q9Y2J4 779 aa12.36□□□□□ -0.43
ERCC8-201ENST00000265038 SETBP1Q9Y6X0 1596 aa12.36□□□□□ -0.43
ERCC8-201ENST00000265038 TMEM94Q12767 1356 aa12.35□□□□□ -0.43
ERCC8-201ENST00000265038 KIF1BO60333 1816 aa12.34□□□□□ -0.43
ERCC8-201ENST00000265038 NRXN3Q9Y4C0 1643 aa12.34□□□□□ -0.43
ERCC8-201ENST00000265038 DIP2AQ14689 1571 aa12.34□□□□□ -0.43
ERCC8-201ENST00000265038 TOM1O60784 492 aa12.33□□□□□ -0.43
ERCC8-201ENST00000265038 NWD1Q149M9 1564 aa12.33□□□□□ -0.44
ERCC8-201ENST00000265038 NKTRP30414 1462 aaKnown RBP12.33□□□□□ -0.44
ERCC8-201ENST00000265038 PIP4K2BP78356 416 aa12.3□□□□□ -0.44
ERCC8-201ENST00000265038 DHX57Q6P158 1386 aaKnown RBP12.3□□□□□ -0.44
ERCC8-201ENST00000265038 ALKQ9UM73 1620 aa12.29□□□□□ -0.44
ERCC8-201ENST00000265038 DCAF11Q8TEB1 546 aa12.29□□□□□ -0.44
ERCC8-201ENST00000265038 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
ERCC8-201ENST00000265038 PIK3C2GO75747 1445 aa12.29□□□□□ -0.44
ERCC8-201ENST00000265038 NCOA3Q9Y6Q9 1424 aa12.29□□□□□ -0.44
ERCC8-201ENST00000265038 C14orf93Q9H972 538 aaKnown RBP12.28□□□□□ -0.44
ERCC8-201ENST00000265038 PPLO60437 1756 aa12.28□□□□□ -0.44
ERCC8-201ENST00000265038 NRXN1Q9ULB1 1477 aa12.28□□□□□ -0.44
ERCC8-201ENST00000265038 SIN3AQ96ST3 1273 aa12.28□□□□□ -0.44
ERCC8-201ENST00000265038 CHD2O14647 1828 aaKnown RBP12.28□□□□□ -0.44
ERCC8-201ENST00000265038 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.44
ERCC8-201ENST00000265038 MYOM2P54296 1465 aa12.27□□□□□ -0.44
ERCC8-201ENST00000265038 CFAP70Q5T0N1 1121 aa12.27□□□□□ -0.44
ERCC8-201ENST00000265038 TMEM132EQ6IEE7 984 aa12.27□□□□□ -0.44
ERCC8-201ENST00000265038 MSH6P52701 1360 aa12.27□□□□□ -0.45
ERCC8-201ENST00000265038 ROBO2Q9HCK4 1378 aa12.26□□□□□ -0.45
ERCC8-201ENST00000265038 C14orf37Q86TY3 774 aa12.26□□□□□ -0.45
ERCC8-201ENST00000265038 STAC3Q96MF2 364 aa12.26□□□□□ -0.45
ERCC8-201ENST00000265038 C19orf44Q9H6X5 657 aa12.26□□□□□ -0.45
ERCC8-201ENST00000265038 STK26Q9P289 416 aa12.25□□□□□ -0.45
ERCC8-201ENST00000265038 XRN1Q8IZH2 1706 aaKnown RBP12.24□□□□□ -0.45
ERCC8-201ENST00000265038 IFT172Q9UG01 1749 aa12.24□□□□□ -0.45
ERCC8-201ENST00000265038 XIRP1Q702N8 1843 aaKnown RBP12.24□□□□□ -0.45
ERCC8-201ENST00000265038 PRAG1Q86YV5 1406 aa12.24□□□□□ -0.45
ERCC8-201ENST00000265038 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
ERCC8-201ENST00000265038 LRPPRCP42704 1394 aaKnown RBP12.24□□□□□ -0.45
ERCC8-201ENST00000265038 SETD1AO15047 1707 aaKnown RBP12.23□□□□□ -0.45
ERCC8-201ENST00000265038 HSPA1LP34931 641 aa12.23□□□□□ -0.45
ERCC8-201ENST00000265038 SLAIN2Q9P270 581 aa12.23□□□□□ -0.45
ERCC8-201ENST00000265038 PTCH1Q13635 1447 aa12.23□□□□□ -0.45
ERCC8-201ENST00000265038 ASXL1Q8IXJ9 1541 aa12.23□□□□□ -0.45
ERCC8-201ENST00000265038 NEUROD1Q13562 356 aa12.23□□□□□ -0.45
ERCC8-201ENST00000265038 ABCC11Q96J66 1382 aa12.23□□□□□ -0.45
ERCC8-201ENST00000265038 CADPS2Q86UW7 1296 aa12.22□□□□□ -0.45
ERCC8-201ENST00000265038 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
ERCC8-201ENST00000265038 ATF3P18847 181 aa12.21□□□□□ -0.45
ERCC8-201ENST00000265038 WAPLQ7Z5K2 1190 aa12.21□□□□□ -0.45
ERCC8-201ENST00000265038 L3MBTL2Q969R5 705 aa12.21□□□□□ -0.45
ERCC8-201ENST00000265038 TECPR2O15040 1411 aa12.21□□□□□ -0.46
ERCC8-201ENST00000265038 YTHDC2Q9H6S0 1430 aaKnown RBP12.21□□□□□ -0.46
ERCC8-201ENST00000265038 SIRT1Q96EB6 747 aa12.2□□□□□ -0.46
ERCC8-201ENST00000265038 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
ERCC8-201ENST00000265038 PLEKHH1Q9ULM0 1364 aa12.19□□□□□ -0.46
ERCC8-201ENST00000265038 DCCP43146 1447 aa12.19□□□□□ -0.46
ERCC8-201ENST00000265038 ADGRB1O14514 1584 aa12.17□□□□□ -0.46
ERCC8-201ENST00000265038 TRAK1Q9UPV9 953 aa12.16□□□□□ -0.46
ERCC8-201ENST00000265038 MST1RQ04912 1400 aa12.16□□□□□ -0.46
ERCC8-201ENST00000265038 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.16□□□□□ -0.46
ERCC8-201ENST00000265038 NBPF1Q3BBV0 1214 aa12.16□□□□□ -0.46
ERCC8-201ENST00000265038 BRINP3Q76B58 766 aa12.16□□□□□ -0.46
ERCC8-201ENST00000265038 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
ERCC8-201ENST00000265038 SAFB2Q14151 953 aaKnown RBP eCLIP12.14□□□□□ -0.474e-6■■■■□ 19.5
ERCC8-201ENST00000265038 LAMC1P11047 1609 aa12.14□□□□□ -0.47
ERCC8-201ENST00000265038 POGKQ9P215 609 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 282.6 ms