RNA–Protein interactions for RNA: ENST00000262717.8

CDH20-201, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDH20, Length 3,882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-201ENST00000262717 CABP2Q9NPB3 220 aa18.99■□□□□ 0.63
CDH20-201ENST00000262717 CENPJQ9HC77 1338 aaPredicted RBP18.99■□□□□ 0.63
CDH20-201ENST00000262717 CDC42BPAQ5VT25 1732 aa18.98■□□□□ 0.63
CDH20-201ENST00000262717 LRPPRCP42704 1394 aaKnown RBP18.97■□□□□ 0.63
CDH20-201ENST00000262717 SAMD9LQ8IVG5 1584 aa18.97■□□□□ 0.63
CDH20-201ENST00000262717 FTSJ3Q8IY81 847 aaKnown RBP18.97■□□□□ 0.63
CDH20-201ENST00000262717 AMER1Q5JTC6 1135 aaPredicted RBP18.97■□□□□ 0.63
CDH20-201ENST00000262717 ARHGEF12Q9NZN5 1544 aa18.96■□□□□ 0.63
CDH20-201ENST00000262717 ERCC6L2Q5T890 1561 aa18.96■□□□□ 0.63
CDH20-201ENST00000262717 MINK1Q8N4C8 1332 aaPredicted RBP18.96■□□□□ 0.63
CDH20-201ENST00000262717 PLA2R1Q13018 1463 aa18.96■□□□□ 0.63
CDH20-201ENST00000262717 MTHFSP49914 203 aa18.95■□□□□ 0.62
CDH20-201ENST00000262717 PLCH2O75038 1416 aa18.94■□□□□ 0.62
CDH20-201ENST00000262717 SPRYD3Q8NCJ5 442 aa18.94■□□□□ 0.62
CDH20-201ENST00000262717 DDRGK1Q96HY6 314 aa18.94■□□□□ 0.62
CDH20-201ENST00000262717 BACH2Q9BYV9 841 aa18.94■□□□□ 0.62
CDH20-201ENST00000262717 DUSP27Q5VZP5 1158 aa18.93■□□□□ 0.62
CDH20-201ENST00000262717 GGNBP2Q9H3C7 697 aa18.93■□□□□ 0.62
CDH20-201ENST00000262717 SPINK5Q9NQ38 1064 aaPredicted RBP18.93■□□□□ 0.62
CDH20-201ENST00000262717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.93■□□□□ 0.62
CDH20-201ENST00000262717 MAPK8IP3Q9UPT6 1336 aa18.92■□□□□ 0.62
CDH20-201ENST00000262717 PLEKHH1Q9ULM0 1364 aa18.92■□□□□ 0.62
CDH20-201ENST00000262717 SOX12O15370 315 aa18.92■□□□□ 0.62
CDH20-201ENST00000262717 SLC24A1O60721 1099 aa18.92■□□□□ 0.62
CDH20-201ENST00000262717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.92■□□□□ 0.62
CDH20-201ENST00000262717 TTC37Q6PGP7 1564 aa18.92■□□□□ 0.62
CDH20-201ENST00000262717 E9PSI1 815 aa18.92■□□□□ 0.62
CDH20-201ENST00000262717 CENPQQ7L2Z9 268 aaPredicted RBP18.91■□□□□ 0.62
CDH20-201ENST00000262717 ESF1Q9H501 851 aaKnown RBP18.91■□□□□ 0.62
CDH20-201ENST00000262717 RNF123Q5XPI4 1314 aa18.91■□□□□ 0.62
CDH20-201ENST00000262717 CYB5RLQ6IPT4 315 aa18.9■□□□□ 0.62
CDH20-201ENST00000262717 TCP11L2Q8N4U5 519 aa18.9■□□□□ 0.62
CDH20-201ENST00000262717 COL17A1Q9UMD9 1497 aaPredicted RBP18.89■□□□□ 0.61
CDH20-201ENST00000262717 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.61
CDH20-201ENST00000262717 UPF2Q9HAU5 1272 aaKnown RBP18.89■□□□□ 0.61
CDH20-201ENST00000262717 SLFN5Q08AF3 891 aa18.88■□□□□ 0.61
CDH20-201ENST00000262717 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
CDH20-201ENST00000262717 SLKQ9H2G2 1235 aaPredicted RBP18.88■□□□□ 0.61
CDH20-201ENST00000262717 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
CDH20-201ENST00000262717 DUOX2Q9NRD8 1548 aa18.87■□□□□ 0.61
CDH20-201ENST00000262717 FANCAO15360 1455 aa18.87■□□□□ 0.61
CDH20-201ENST00000262717 NUTM2FA1L443 756 aa18.87■□□□□ 0.61
CDH20-201ENST00000262717 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
CDH20-201ENST00000262717 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
CDH20-201ENST00000262717 MS4A1P11836 297 aa18.86■□□□□ 0.61
CDH20-201ENST00000262717 CGNL1Q0VF96 1302 aa18.85■□□□□ 0.61
CDH20-201ENST00000262717 FAM161AQ3B820 660 aa18.85■□□□□ 0.61
CDH20-201ENST00000262717 ELL2O00472 640 aaPredicted RBP18.84■□□□□ 0.61
CDH20-201ENST00000262717 TSR2Q969E8 191 aaKnown RBP18.84■□□□□ 0.61
CDH20-201ENST00000262717 SMC4Q9NTJ3 1288 aa18.84■□□□□ 0.61
CDH20-201ENST00000262717 SCAF11Q99590 1463 aaKnown RBP18.84■□□□□ 0.61
CDH20-201ENST00000262717 ABCC2Q92887 1545 aa18.84■□□□□ 0.61
CDH20-201ENST00000262717 ITPRIPQ8IWB1 547 aa18.83■□□□□ 0.61
CDH20-201ENST00000262717 KDM5DQ9BY66 1539 aa18.83■□□□□ 0.61
CDH20-201ENST00000262717 NOS1P29475 1434 aa18.83■□□□□ 0.6
CDH20-201ENST00000262717 NSD3Q9BZ95 1437 aa18.83■□□□□ 0.6
CDH20-201ENST00000262717 CFAP65Q6ZU64 1925 aaKnown RBP18.82■□□□□ 0.6
CDH20-201ENST00000262717 VGFO15240 615 aaPredicted RBP18.82■□□□□ 0.6
CDH20-201ENST00000262717 EVC2Q86UK5 1308 aa18.82■□□□□ 0.6
CDH20-201ENST00000262717 ARHGEF5Q12774 1597 aa18.82■□□□□ 0.6
CDH20-201ENST00000262717 ADCY10Q96PN6 1610 aa18.82■□□□□ 0.6
CDH20-201ENST00000262717 GPRASP1Q5JY77 1395 aa18.82■□□□□ 0.6
CDH20-201ENST00000262717 WWC1Q8IX03 1113 aa18.82■□□□□ 0.6
CDH20-201ENST00000262717 MAGI2Q86UL8 1455 aa18.82■□□□□ 0.6
CDH20-201ENST00000262717 CROCC2H7BZ55 1655 aa18.81■□□□□ 0.6
CDH20-201ENST00000262717 RUNDC1Q96C34 613 aa18.81■□□□□ 0.6
CDH20-201ENST00000262717 TNNQ9UQP3 1299 aa18.8■□□□□ 0.6
CDH20-201ENST00000262717 FBLN1P23142 703 aa18.8■□□□□ 0.6
CDH20-201ENST00000262717 STAC3Q96MF2 364 aa18.79■□□□□ 0.6
CDH20-201ENST00000262717 CDC42BPBQ9Y5S2 1711 aa18.78■□□□□ 0.6
CDH20-201ENST00000262717 MYH16Q9H6N6 1097 aa18.77■□□□□ 0.6
CDH20-201ENST00000262717 UGGT1Q9NYU2 1555 aa18.77■□□□□ 0.6
CDH20-201ENST00000262717 PREX2Q70Z35 1606 aa18.77■□□□□ 0.6
CDH20-201ENST00000262717 PRAM1Q96QH2 718 aa18.77■□□□□ 0.6
CDH20-201ENST00000262717 CHD1O14646 1710 aa18.77■□□□□ 0.59
CDH20-201ENST00000262717 IGHDP01880 384 aa18.75■□□□□ 0.59
CDH20-201ENST00000262717 HMOX1P09601 288 aa18.75■□□□□ 0.59
CDH20-201ENST00000262717 HDGFL2Q7Z4V5 671 aaPredicted RBP18.75■□□□□ 0.59
CDH20-201ENST00000262717 IDI1Q13907 227 aa18.74■□□□□ 0.59
CDH20-201ENST00000262717 FBXO31Q5XUX0 539 aaPredicted RBP18.74■□□□□ 0.59
CDH20-201ENST00000262717 TERF2IPQ9NYB0 399 aa18.74■□□□□ 0.59
CDH20-201ENST00000262717 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
CDH20-201ENST00000262717 MFAP1P55081 439 aaKnown RBP18.73■□□□□ 0.59
CDH20-201ENST00000262717 ASXL2Q76L83 1435 aa18.73■□□□□ 0.59
CDH20-201ENST00000262717 RIPK4P57078 832 aa18.73■□□□□ 0.59
CDH20-201ENST00000262717 BECN1Q14457 450 aa18.73■□□□□ 0.59
CDH20-201ENST00000262717 EXOSC9Q06265 439 aaKnown RBP18.72■□□□□ 0.59
CDH20-201ENST00000262717 ATP10AO60312 1499 aa18.72■□□□□ 0.59
CDH20-201ENST00000262717 HSP90AA1P07900 732 aaKnown RBP18.72■□□□□ 0.59
CDH20-201ENST00000262717 CD109Q6YHK3 1445 aa18.71■□□□□ 0.59
CDH20-201ENST00000262717 ASXL1Q8IXJ9 1541 aa18.71■□□□□ 0.59
CDH20-201ENST00000262717 RWDD1Q9H446 243 aaPredicted RBP18.71■□□□□ 0.59
CDH20-201ENST00000262717 APBB1O00213 710 aa18.71■□□□□ 0.58
CDH20-201ENST00000262717 MYO5CQ9NQX4 1742 aa18.7■□□□□ 0.58
CDH20-201ENST00000262717 NFKBIBQ15653 356 aa18.7■□□□□ 0.58
CDH20-201ENST00000262717 CABP1Q9NZU7 370 aa18.7■□□□□ 0.58
CDH20-201ENST00000262717 WDR7Q9Y4E6 1490 aa18.69■□□□□ 0.58
CDH20-201ENST00000262717 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
CDH20-201ENST00000262717 PMFBP1Q8TBY8 1022 aa18.69■□□□□ 0.58
CDH20-201ENST00000262717 TRPM1Q7Z4N2 1603 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms