RNA–Protein interactions for RNA: ENST00000262717.8

CDH20-201, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDH20, Length 3,882 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-201ENST00000262717 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
CDH20-201ENST00000262717 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
CDH20-201ENST00000262717 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
CDH20-201ENST00000262717 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
CDH20-201ENST00000262717 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
CDH20-201ENST00000262717 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
CDH20-201ENST00000262717 ZCCHC6Q5VYS8 1495 aaKnown RBP24.18■■□□□ 1.46
CDH20-201ENST00000262717 PCGF6Q9BYE7 350 aa24.14■■□□□ 1.46
CDH20-201ENST00000262717 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
CDH20-201ENST00000262717 LOC105371045A0A1W2PR82 267 aa23.98■■□□□ 1.43
CDH20-201ENST00000262717 CCDC180Q9P1Z9 1646 aa23.86■■□□□ 1.41
CDH20-201ENST00000262717 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
CDH20-201ENST00000262717 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
CDH20-201ENST00000262717 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
CDH20-201ENST00000262717 HRCP23327 699 aa23.55■■□□□ 1.36
CDH20-201ENST00000262717 ABCC9O60706 1549 aa23.5■■□□□ 1.35
CDH20-201ENST00000262717 TTBK1Q5TCY1 1321 aaPredicted RBP23.39■■□□□ 1.34
CDH20-201ENST00000262717 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
CDH20-201ENST00000262717 TRIM26Q12899 539 aaPredicted RBP23.19■■□□□ 1.3
CDH20-201ENST00000262717 RSF1Q96T23 1441 aaPredicted RBP23.03■■□□□ 1.28
CDH20-201ENST00000262717 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
CDH20-201ENST00000262717 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.26
CDH20-201ENST00000262717 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
CDH20-201ENST00000262717 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
CDH20-201ENST00000262717 UBTFP17480 764 aaKnown RBP22.81■■□□□ 1.24
CDH20-201ENST00000262717 CCER1Q8TC90 406 aaPredicted RBP22.77■■□□□ 1.23
CDH20-201ENST00000262717 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
CDH20-201ENST00000262717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
CDH20-201ENST00000262717 ZEB1P37275 1124 aaPredicted RBP22.66■■□□□ 1.22
CDH20-201ENST00000262717 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
CDH20-201ENST00000262717 NACADO15069 1562 aa22.46■■□□□ 1.19
CDH20-201ENST00000262717 APLP2Q06481 763 aa22.43■■□□□ 1.18
CDH20-201ENST00000262717 WIZO95785 1651 aa22.38■■□□□ 1.17
CDH20-201ENST00000262717 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
CDH20-201ENST00000262717 CSRNP3Q8WYN3 585 aa22.27■■□□□ 1.16
CDH20-201ENST00000262717 ABCC8Q09428 1581 aa22.2■■□□□ 1.14
CDH20-201ENST00000262717 YTHDC1Q96MU7 727 aaKnown RBP22.16■■□□□ 1.14
CDH20-201ENST00000262717 BAZ1AQ9NRL2 1556 aaPredicted RBP22.14■■□□□ 1.14
CDH20-201ENST00000262717 SOGA1O94964 1423 aa22.13■■□□□ 1.13
CDH20-201ENST00000262717 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
CDH20-201ENST00000262717 ITGAEP38570 1179 aa22.05■■□□□ 1.12
CDH20-201ENST00000262717 DIEXFQ68CQ4 756 aaKnown RBP22.05■■□□□ 1.12
CDH20-201ENST00000262717 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
CDH20-201ENST00000262717 CEP162Q5TB80 1403 aa22.02■■□□□ 1.12
CDH20-201ENST00000262717 RUSC2Q8N2Y8 1516 aa21.94■■□□□ 1.1
CDH20-201ENST00000262717 CENPBP07199 599 aaPredicted RBP21.89■■□□□ 1.1
CDH20-201ENST00000262717 WRNQ14191 1432 aaPredicted RBP eCLIP21.87■■□□□ 1.09
CDH20-201ENST00000262717 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
CDH20-201ENST00000262717 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
CDH20-201ENST00000262717 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
CDH20-201ENST00000262717 TNIKQ9UKE5 1360 aa21.79■■□□□ 1.08
CDH20-201ENST00000262717 SMARCA2P51531 1590 aa21.73■■□□□ 1.07
CDH20-201ENST00000262717 CLIP1P30622 1438 aa21.73■■□□□ 1.07
CDH20-201ENST00000262717 GOLGA3Q08378 1498 aa21.72■■□□□ 1.07
CDH20-201ENST00000262717 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
CDH20-201ENST00000262717 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
CDH20-201ENST00000262717 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.06
CDH20-201ENST00000262717 GTF3C3Q9Y5Q9 886 aa21.7■■□□□ 1.06
CDH20-201ENST00000262717 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
CDH20-201ENST00000262717 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
CDH20-201ENST00000262717 EEA1Q15075 1411 aa21.63■■□□□ 1.05
CDH20-201ENST00000262717 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
CDH20-201ENST00000262717 FAM50AQ14320 339 aaKnown RBP21.53■■□□□ 1.04
CDH20-201ENST00000262717 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
CDH20-201ENST00000262717 MIER1Q8N108 512 aa21.49■■□□□ 1.03
CDH20-201ENST00000262717 RAPGEF2Q9Y4G8 1499 aa21.48■■□□□ 1.03
CDH20-201ENST00000262717 KANK4Q5T7N3 995 aaPredicted RBP21.44■■□□□ 1.02
CDH20-201ENST00000262717 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
CDH20-201ENST00000262717 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
CDH20-201ENST00000262717 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
CDH20-201ENST00000262717 VPS8Q8N3P4 1428 aa21.36■■□□□ 1.01
CDH20-201ENST00000262717 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
CDH20-201ENST00000262717 PELP1Q8IZL8 1130 aaKnown RBP21.31■■□□□ 1
CDH20-201ENST00000262717 ARID3CA6NKF2 412 aa21.3■■□□□ 1
CDH20-201ENST00000262717 KIF27Q86VH2 1401 aa21.26■□□□□ 0.99
CDH20-201ENST00000262717 HIRIP3Q9BW71 556 aaPredicted RBP21.21■□□□□ 0.99
CDH20-201ENST00000262717 CUX2O14529 1486 aa21.16■□□□□ 0.98
CDH20-201ENST00000262717 KIF21BO75037 1637 aa21.09■□□□□ 0.97
CDH20-201ENST00000262717 SIN3AQ96ST3 1273 aa21.08■□□□□ 0.97
CDH20-201ENST00000262717 CNGB1Q14028 1251 aaPredicted RBP21.08■□□□□ 0.97
CDH20-201ENST00000262717 BCANQ96GW7 911 aa21.06■□□□□ 0.96
CDH20-201ENST00000262717 DDX10Q13206 875 aaKnown RBP21.06■□□□□ 0.96
CDH20-201ENST00000262717 CARMIL1Q5VZK9 1371 aa21.05■□□□□ 0.96
CDH20-201ENST00000262717 CCNB3Q8WWL7 1395 aa21.04■□□□□ 0.96
CDH20-201ENST00000262717 TRIM52Q96A61 297 aa21■□□□□ 0.95
CDH20-201ENST00000262717 CHIC2Q9UKJ5 165 aa20.98■□□□□ 0.95
CDH20-201ENST00000262717 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
CDH20-201ENST00000262717 DHX57Q6P158 1386 aaKnown RBP20.97■□□□□ 0.95
CDH20-201ENST00000262717 CUX1P39880 1505 aa20.94■□□□□ 0.94
CDH20-201ENST00000262717 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
CDH20-201ENST00000262717 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
CDH20-201ENST00000262717 CADPSQ9ULU8 1353 aa20.92■□□□□ 0.94
CDH20-201ENST00000262717 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
CDH20-201ENST00000262717 IGF1RP08069 1367 aa20.91■□□□□ 0.94
CDH20-201ENST00000262717 POLR3GLQ9BT43 218 aa20.9■□□□□ 0.94
CDH20-201ENST00000262717 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.93
CDH20-201ENST00000262717 PRXQ9BXM0 1461 aa20.89■□□□□ 0.93
CDH20-201ENST00000262717 FBLN2P98095 1184 aa20.86■□□□□ 0.93
CDH20-201ENST00000262717 KCNH8Q96L42 1107 aa20.86■□□□□ 0.93
CDH20-201ENST00000262717 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms