RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 PPP1R15AO75807 674 aaPredicted RBP31.59■■■□□ 2.65
CCNE1-201ENST00000262643 FOXD1Q16676 465 aa31.59■■■□□ 2.65
CCNE1-201ENST00000262643 BCANQ96GW7 911 aa31.58■■■□□ 2.65
CCNE1-201ENST00000262643 NUTM2DQ5VT03 806 aaPredicted RBP31.58■■■□□ 2.65
CCNE1-201ENST00000262643 RAB3GAP2Q9H2M9 1393 aa31.57■■■□□ 2.64
CCNE1-201ENST00000262643 CLTCL1P53675 1640 aa31.57■■■□□ 2.64
CCNE1-201ENST00000262643 HDGFP51858 240 aaKnown RBP31.56■■■□□ 2.64
CCNE1-201ENST00000262643 MPHOSPH9Q99550 1183 aa31.56■■■□□ 2.64
CCNE1-201ENST00000262643 SLC26A8Q96RN1 970 aa31.54■■■□□ 2.64
CCNE1-201ENST00000262643 CPS1P31327 1500 aa31.54■■■□□ 2.64
CCNE1-201ENST00000262643 ZNF326Q5BKZ1 582 aaKnown RBP31.52■■■□□ 2.64
CCNE1-201ENST00000262643 IQSEC2Q5JU85 1478 aa31.52■■■□□ 2.64
CCNE1-201ENST00000262643 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.51■■■□□ 2.64
CCNE1-201ENST00000262643 STRCP1A6NGW2 1772 aa31.51■■■□□ 2.63
CCNE1-201ENST00000262643 ACIN1Q9UKV3 1341 aaKnown RBP31.49■■■□□ 2.63
CCNE1-201ENST00000262643 PLEKHG1Q9ULL1 1385 aa31.49■■■□□ 2.63
CCNE1-201ENST00000262643 KIF1BO60333 1816 aa31.47■■■□□ 2.63
CCNE1-201ENST00000262643 UBAP1LF5GYI3 381 aa31.41■■■□□ 2.62
CCNE1-201ENST00000262643 LRRC7Q96NW7 1537 aa31.4■■■□□ 2.62
CCNE1-201ENST00000262643 HRCP23327 699 aa31.39■■■□□ 2.62
CCNE1-201ENST00000262643 CCDC144AA2RUR9 1427 aa31.38■■■□□ 2.61
CCNE1-201ENST00000262643 KCNA6P17658 529 aa31.37■■■□□ 2.61
CCNE1-201ENST00000262643 NEXMIFQ5QGS0 1516 aa31.36■■■□□ 2.61
CCNE1-201ENST00000262643 ADAMTS13Q76LX8 1427 aa31.35■■■□□ 2.61
CCNE1-201ENST00000262643 TBX22Q9Y458 520 aa31.34■■■□□ 2.61
CCNE1-201ENST00000262643 DIP2AQ14689 1571 aa31.29■■■□□ 2.6
CCNE1-201ENST00000262643 RGL3Q3MIN7 710 aa31.28■■■□□ 2.6
CCNE1-201ENST00000262643 RBM33Q96EV2 1170 aaKnown RBP31.28■■■□□ 2.6
CCNE1-201ENST00000262643 CHD2O14647 1828 aaKnown RBP31.28■■■□□ 2.6
CCNE1-201ENST00000262643 NWD1Q149M9 1564 aa31.28■■■□□ 2.6
CCNE1-201ENST00000262643 TOM1O60784 492 aa31.27■■■□□ 2.6
CCNE1-201ENST00000262643 PROSER2Q86WR7 435 aaPredicted RBP31.27■■■□□ 2.6
CCNE1-201ENST00000262643 NRXN3Q9Y4C0 1643 aa31.27■■■□□ 2.6
CCNE1-201ENST00000262643 SETBP1Q9Y6X0 1596 aa31.26■■■□□ 2.59
CCNE1-201ENST00000262643 SCAF1Q9H7N4 1312 aaKnown RBP31.26■■■□□ 2.59
CCNE1-201ENST00000262643 XIRP1Q702N8 1843 aaKnown RBP31.25■■■□□ 2.59
CCNE1-201ENST00000262643 TMEM94Q12767 1356 aa31.25■■■□□ 2.59
CCNE1-201ENST00000262643 RPGRIP1LQ68CZ1 1315 aa31.25■■■□□ 2.59
CCNE1-201ENST00000262643 VGFO15240 615 aaPredicted RBP31.25■■■□□ 2.59
CCNE1-201ENST00000262643 PIP4K2BP78356 416 aa31.25■■■□□ 2.59
CCNE1-201ENST00000262643 NKTRP30414 1462 aaKnown RBP31.24■■■□□ 2.59
CCNE1-201ENST00000262643 SPATA31E1Q6ZUB1 1445 aa31.23■■■□□ 2.59
CCNE1-201ENST00000262643 PPLO60437 1756 aa31.22■■■□□ 2.59
CCNE1-201ENST00000262643 PIK3R4Q99570 1358 aa31.21■■■□□ 2.59
CCNE1-201ENST00000262643 AMOTL2Q9Y2J4 779 aa31.17■■■□□ 2.58
CCNE1-201ENST00000262643 ALKQ9UM73 1620 aa31.17■■■□□ 2.58
CCNE1-201ENST00000262643 METP08581 1390 aa31.17■■■□□ 2.58
CCNE1-201ENST00000262643 ANKRD30BQ9BXX2 1392 aa31.17■■■□□ 2.58
CCNE1-201ENST00000262643 PTPRUQ92729 1446 aa31.17■■■□□ 2.58
CCNE1-201ENST00000262643 ADGRF5Q8IZF2 1346 aa31.12■■■□□ 2.57
CCNE1-201ENST00000262643 IFT172Q9UG01 1749 aa31.11■■■□□ 2.57
CCNE1-201ENST00000262643 C14orf37Q86TY3 774 aa31.09■■■□□ 2.57
CCNE1-201ENST00000262643 CCER1Q8TC90 406 aaPredicted RBP31.09■■■□□ 2.57
CCNE1-201ENST00000262643 MSH6P52701 1360 aa31.08■■■□□ 2.57
CCNE1-201ENST00000262643 XRN1Q8IZH2 1706 aaKnown RBP31.07■■■□□ 2.56
CCNE1-201ENST00000262643 SETD1AO15047 1707 aaKnown RBP31.06■■■□□ 2.56
CCNE1-201ENST00000262643 HSPA1LP34931 641 aa31.02■■■□□ 2.56
CCNE1-201ENST00000262643 NCOA3Q9Y6Q9 1424 aa31.01■■■□□ 2.55
CCNE1-201ENST00000262643 PIK3C2GO75747 1445 aa30.98■■■□□ 2.55
CCNE1-201ENST00000262643 C19orf44Q9H6X5 657 aa30.97■■■□□ 2.55
CCNE1-201ENST00000262643 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.95■■■□□ 2.54
CCNE1-201ENST00000262643 MYOM2P54296 1465 aa30.95■■■□□ 2.54
CCNE1-201ENST00000262643 ZEB1P37275 1124 aaPredicted RBP30.95■■■□□ 2.54
CCNE1-201ENST00000262643 SLAIN2Q9P270 581 aa30.93■■■□□ 2.54
CCNE1-201ENST00000262643 KDM2AQ9Y2K7 1162 aa30.93■■■□□ 2.54
CCNE1-201ENST00000262643 ATF3P18847 181 aa30.93■■■□□ 2.54
CCNE1-201ENST00000262643 DCAF11Q8TEB1 546 aa30.93■■■□□ 2.54
CCNE1-201ENST00000262643 TMEM132EQ6IEE7 984 aa30.92■■■□□ 2.54
CCNE1-201ENST00000262643 ROBO2Q9HCK4 1378 aa30.91■■■□□ 2.54
CCNE1-201ENST00000262643 STK26Q9P289 416 aa30.91■■■□□ 2.54
CCNE1-201ENST00000262643 NRXN1Q9ULB1 1477 aa30.91■■■□□ 2.54
CCNE1-201ENST00000262643 CADPS2Q86UW7 1296 aa30.9■■■□□ 2.54
CCNE1-201ENST00000262643 PTCH1Q13635 1447 aa30.9■■■□□ 2.54
CCNE1-201ENST00000262643 FAM135BQ49AJ0 1406 aa30.9■■■□□ 2.54
CCNE1-201ENST00000262643 ROBO1Q9Y6N7 1651 aa30.89■■■□□ 2.54
CCNE1-201ENST00000262643 CFAP70Q5T0N1 1121 aa30.88■■■□□ 2.53
CCNE1-201ENST00000262643 ASXL1Q8IXJ9 1541 aa30.87■■■□□ 2.53
CCNE1-201ENST00000262643 C14orf93Q9H972 538 aaKnown RBP30.87■■■□□ 2.53
CCNE1-201ENST00000262643 DHX57Q6P158 1386 aaKnown RBP30.86■■■□□ 2.53
CCNE1-201ENST00000262643 ADGRL3Q9HAR2 1447 aa30.85■■■□□ 2.53
CCNE1-201ENST00000262643 PRAG1Q86YV5 1406 aa30.84■■■□□ 2.53
CCNE1-201ENST00000262643 NALCNQ8IZF0 1738 aa30.84■■■□□ 2.53
CCNE1-201ENST00000262643 LRPPRCP42704 1394 aaKnown RBP30.83■■■□□ 2.53
CCNE1-201ENST00000262643 DCCP43146 1447 aa30.83■■■□□ 2.53
CCNE1-201ENST00000262643 LAMC1P11047 1609 aa30.82■■■□□ 2.52
CCNE1-201ENST00000262643 YTHDC2Q9H6S0 1430 aaKnown RBP30.8■■■□□ 2.52
CCNE1-201ENST00000262643 ABCC11Q96J66 1382 aa30.78■■■□□ 2.52
CCNE1-201ENST00000262643 WAPLQ7Z5K2 1190 aa30.78■■■□□ 2.52
CCNE1-201ENST00000262643 STAC3Q96MF2 364 aa30.78■■■□□ 2.52
CCNE1-201ENST00000262643 SIN3AQ96ST3 1273 aa30.78■■■□□ 2.52
CCNE1-201ENST00000262643 TECPR2O15040 1411 aa30.78■■■□□ 2.52
CCNE1-201ENST00000262643 KNDC1Q76NI1 1749 aa30.75■■■□□ 2.51
CCNE1-201ENST00000262643 MST1RQ04912 1400 aa30.74■■■□□ 2.51
CCNE1-201ENST00000262643 NEUROD1Q13562 356 aa30.73■■■□□ 2.51
CCNE1-201ENST00000262643 PLEKHH1Q9ULM0 1364 aa30.73■■■□□ 2.51
CCNE1-201ENST00000262643 BRINP3Q76B58 766 aa30.71■■■□□ 2.51
CCNE1-201ENST00000262643 DISP3Q9P2K9 1392 aa30.7■■■□□ 2.5
CCNE1-201ENST00000262643 PHLPP1O60346 1717 aa30.7■■■□□ 2.5
CCNE1-201ENST00000262643 ADGRB1O14514 1584 aa30.69■■■□□ 2.5
CCNE1-201ENST00000262643 SAFB2Q14151 953 aaKnown RBP eCLIP30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms