RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 NGLY1Q96IV0 654 aa8.07□□□□□ -1.12
BRIP1-201ENST00000259008 PRDM11Q9NQV5 511 aa8.07□□□□□ -1.12
BRIP1-201ENST00000259008 EHBP1L1Q8N3D4 1523 aa8.07□□□□□ -1.12
BRIP1-201ENST00000259008 KIF14Q15058 1648 aa8.07□□□□□ -1.12
BRIP1-201ENST00000259008 B4GALNT3Q6L9W6 998 aa8.06□□□□□ -1.12
BRIP1-201ENST00000259008 CHMP4AQ9BY43 222 aa8.06□□□□□ -1.12
BRIP1-201ENST00000259008 CDK19Q9BWU1 502 aa8.06□□□□□ -1.12
BRIP1-201ENST00000259008 DIAPH1O60610 1272 aaKnown RBP8.06□□□□□ -1.12
BRIP1-201ENST00000259008 ZC3H6P61129 1189 aaKnown RBP8.06□□□□□ -1.12
BRIP1-201ENST00000259008 MIA2Q96PC5 1412 aa8.06□□□□□ -1.12
BRIP1-201ENST00000259008 ERICH3Q5RHP9 1530 aa8.06□□□□□ -1.12
BRIP1-201ENST00000259008 NCLP19338 710 aaKnown RBP8.06□□□□□ -1.12
BRIP1-201ENST00000259008 AIMP1Q12904 312 aaKnown RBP8.06□□□□□ -1.12
BRIP1-201ENST00000259008 DENND4BO75064 1496 aaPredicted RBP8.06□□□□□ -1.12
BRIP1-201ENST00000259008 ERBINQ96RT1 1412 aa8.05□□□□□ -1.12
BRIP1-201ENST00000259008 RRBP1Q9P2E9 1410 aaKnown RBP8.05□□□□□ -1.12
BRIP1-201ENST00000259008 EPRSP07814 1512 aaKnown RBP8.05□□□□□ -1.12
BRIP1-201ENST00000259008 TRIM34Q9BYJ4 488 aa8.05□□□□□ -1.12
BRIP1-201ENST00000259008 TOMM22Q9NS69 142 aa8.05□□□□□ -1.12
BRIP1-201ENST00000259008 USP47Q96K76 1375 aa8.05□□□□□ -1.12
BRIP1-201ENST00000259008 ARAP1Q96P48 1450 aa8.05□□□□□ -1.12
BRIP1-201ENST00000259008 ZRSR1Q15695 479 aaKnown RBP8.05□□□□□ -1.12
BRIP1-201ENST00000259008 VPS37DQ86XT2 251 aa8.05□□□□□ -1.12
BRIP1-201ENST00000259008 ASXL2Q76L83 1435 aa8.05□□□□□ -1.12
BRIP1-201ENST00000259008 FANCAO15360 1455 aa8.05□□□□□ -1.12
BRIP1-201ENST00000259008 CLUAP1Q96AJ1 413 aa8.04□□□□□ -1.12
BRIP1-201ENST00000259008 SLC52A1Q9NWF4 448 aa8.04□□□□□ -1.12
BRIP1-201ENST00000259008 SMG6Q86US8 1419 aaKnown RBP8.04□□□□□ -1.12
BRIP1-201ENST00000259008 CWC22Q9HCG8 908 aaKnown RBP8.04□□□□□ -1.12
BRIP1-201ENST00000259008 TEX14Q8IWB6 1497 aa8.04□□□□□ -1.12
BRIP1-201ENST00000259008 SUPT6HQ7KZ85 1726 aaKnown RBP8.04□□□□□ -1.12
BRIP1-201ENST00000259008 TCERG1O14776 1098 aaKnown RBP8.03□□□□□ -1.12
BRIP1-201ENST00000259008 NEXNQ0ZGT2 675 aa8.03□□□□□ -1.12
BRIP1-201ENST00000259008 GNL2Q13823 731 aaKnown RBP8.03□□□□□ -1.12
BRIP1-201ENST00000259008 ZNF428Q96B54 188 aa8.03□□□□□ -1.12
BRIP1-201ENST00000259008 TATP17735 454 aaPredicted RBP8.03□□□□□ -1.12
BRIP1-201ENST00000259008 GPATCH3Q96I76 525 aa8.03□□□□□ -1.12
BRIP1-201ENST00000259008 TRIM6-TRIM34B2RNG4 842 aa8.02□□□□□ -1.12
BRIP1-201ENST00000259008 VPS53Q5VIR6 699 aa8.02□□□□□ -1.12
BRIP1-201ENST00000259008 SAMD1Q6SPF0 538 aaPredicted RBP8.02□□□□□ -1.12
BRIP1-201ENST00000259008 NLRP13Q86W25 1043 aa8.02□□□□□ -1.12
BRIP1-201ENST00000259008 TOM1O60784 492 aa8.02□□□□□ -1.13
BRIP1-201ENST00000259008 CABP1Q9NZU7 370 aa8.02□□□□□ -1.13
BRIP1-201ENST00000259008 RTEL1-TNFRSF6BF6WH68 1400 aa8.02□□□□□ -1.13
BRIP1-201ENST00000259008 KIAA1211Q6ZU35 1233 aa8.02□□□□□ -1.13
BRIP1-201ENST00000259008 WAPLQ7Z5K2 1190 aa8.02□□□□□ -1.13
BRIP1-201ENST00000259008 NOL10Q9BSC4 688 aaKnown RBP8.01□□□□□ -1.13
BRIP1-201ENST00000259008 TSPYL4Q9UJ04 414 aa8.01□□□□□ -1.13
BRIP1-201ENST00000259008 C9orf78Q9NZ63 289 aaPredicted RBP8.01□□□□□ -1.13
BRIP1-201ENST00000259008 NCKAP5LQ9HCH0 1330 aa8.01□□□□□ -1.13
BRIP1-201ENST00000259008 BCL2L13Q9BXK5 485 aa8.01□□□□□ -1.13
BRIP1-201ENST00000259008 CABP4P57796 275 aa8.01□□□□□ -1.13
BRIP1-201ENST00000259008 CTDP1Q9Y5B0 961 aaPredicted RBP8.01□□□□□ -1.13
BRIP1-201ENST00000259008 RIPK4P57078 832 aa8.01□□□□□ -1.13
BRIP1-201ENST00000259008 BECN1Q14457 450 aa8.01□□□□□ -1.13
BRIP1-201ENST00000259008 AMOTL2Q9Y2J4 779 aa8□□□□□ -1.13
BRIP1-201ENST00000259008 PLIN1O60240 522 aa8□□□□□ -1.13
BRIP1-201ENST00000259008 BICDL1Q6ZP65 573 aa8□□□□□ -1.13
BRIP1-201ENST00000259008 RIC3Q7Z5B4 369 aa8□□□□□ -1.13
BRIP1-201ENST00000259008 C8orf37Q96NL8 207 aa8□□□□□ -1.13
BRIP1-201ENST00000259008 MCCP23508 829 aa8□□□□□ -1.13
BRIP1-201ENST00000259008 HDAC5Q9UQL6 1122 aa8□□□□□ -1.13
BRIP1-201ENST00000259008 KIF6Q6ZMV9 814 aa7.99□□□□□ -1.13
BRIP1-201ENST00000259008 DAPK1P53355 1430 aa7.99□□□□□ -1.13
BRIP1-201ENST00000259008 FOXO3O43524 673 aa7.99□□□□□ -1.13
BRIP1-201ENST00000259008 PLEKHO1Q53GL0 409 aaPredicted RBP7.99□□□□□ -1.13
BRIP1-201ENST00000259008 EIF4G3O43432 1585 aaKnown RBP7.99□□□□□ -1.13
BRIP1-201ENST00000259008 PCF11O94913 1555 aaKnown RBP7.99□□□□□ -1.13
BRIP1-201ENST00000259008 CAMSAP2Q08AD1 1489 aa7.99□□□□□ -1.13
BRIP1-201ENST00000259008 CCDC141Q6ZP82 1450 aa7.99□□□□□ -1.13
BRIP1-201ENST00000259008 LMTK3Q96Q04 1460 aa7.99□□□□□ -1.13
BRIP1-201ENST00000259008 HSP90B1P14625 803 aaKnown RBP7.98□□□□□ -1.13
BRIP1-201ENST00000259008 DDX58O95786 925 aaKnown RBP7.98□□□□□ -1.13
BRIP1-201ENST00000259008 NBR1Q14596 966 aa7.98□□□□□ -1.13
BRIP1-201ENST00000259008 PEG3Q9GZU2 1588 aa7.98□□□□□ -1.13
BRIP1-201ENST00000259008 HSP90AB1P08238 724 aaKnown RBP7.98□□□□□ -1.13
BRIP1-201ENST00000259008 PRXQ9BXM0 1461 aa7.98□□□□□ -1.13
BRIP1-201ENST00000259008 HMMRO75330 724 aa7.98□□□□□ -1.13
BRIP1-201ENST00000259008 NBPF1Q3BBV0 1214 aa7.97□□□□□ -1.13
BRIP1-201ENST00000259008 RRS1Q15050 365 aaKnown RBP7.97□□□□□ -1.13
BRIP1-201ENST00000259008 SPG7Q9UQ90 795 aa7.97□□□□□ -1.13
BRIP1-201ENST00000259008 MSH6P52701 1360 aa7.97□□□□□ -1.13
BRIP1-201ENST00000259008 WASHC2AQ641Q2 1341 aa7.97□□□□□ -1.13
BRIP1-201ENST00000259008 FYB1O15117 783 aa7.97□□□□□ -1.13
BRIP1-201ENST00000259008 EIF5BO60841 1220 aaKnown RBP7.97□□□□□ -1.13
BRIP1-201ENST00000259008 MYBBP1AQ9BQG0 1328 aaKnown RBP7.97□□□□□ -1.13
BRIP1-201ENST00000259008 FKBP5Q13451 457 aaPredicted RBP7.97□□□□□ -1.13
BRIP1-201ENST00000259008 SPRYD3Q8NCJ5 442 aa7.97□□□□□ -1.13
BRIP1-201ENST00000259008 TNRQ92752 1358 aa7.97□□□□□ -1.13
BRIP1-201ENST00000259008 DDRGK1Q96HY6 314 aa7.97□□□□□ -1.13
BRIP1-201ENST00000259008 AMOTL1Q8IY63 956 aa7.96□□□□□ -1.13
BRIP1-201ENST00000259008 NUDT16Q96DE0 195 aaKnown RBP7.96□□□□□ -1.14
BRIP1-201ENST00000259008 WDR7Q9Y4E6 1490 aa7.96□□□□□ -1.14
BRIP1-201ENST00000259008 RCAN3Q9UKA8 241 aa7.95□□□□□ -1.14
BRIP1-201ENST00000259008 FAM135AQ9P2D6 1515 aa7.95□□□□□ -1.14
BRIP1-201ENST00000259008 MTHFSP49914 203 aa7.95□□□□□ -1.14
BRIP1-201ENST00000259008 SLC12A5Q9H2X9 1139 aa7.95□□□□□ -1.14
BRIP1-201ENST00000259008 GOLGA6L22H0YM25 854 aa7.95□□□□□ -1.14
BRIP1-201ENST00000259008 KRT28Q7Z3Y7 464 aa7.95□□□□□ -1.14
BRIP1-201ENST00000259008 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms