RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 SLC24A1O60721 1099 aa11.7□□□□□ -0.54
CALCOCO2-201ENST00000258947 CLTCL1P53675 1640 aa11.7□□□□□ -0.54
CALCOCO2-201ENST00000258947 EFCAB6Q5THR3 1501 aa11.7□□□□□ -0.54
CALCOCO2-201ENST00000258947 MYBBP1AQ9BQG0 1328 aaKnown RBP11.69□□□□□ -0.54
CALCOCO2-201ENST00000258947 SUPT16HQ9Y5B9 1047 aaKnown RBP11.69□□□□□ -0.54
CALCOCO2-201ENST00000258947 RPGRIP1LQ68CZ1 1315 aa11.69□□□□□ -0.54
CALCOCO2-201ENST00000258947 DIP2BQ9P265 1576 aa11.69□□□□□ -0.54
CALCOCO2-201ENST00000258947 WDR43Q15061 677 aaKnown RBP eCLIP11.69□□□□□ -0.54
CALCOCO2-201ENST00000258947 MINK1Q8N4C8 1332 aaPredicted RBP11.69□□□□□ -0.54
CALCOCO2-201ENST00000258947 CEBPAP49715 358 aaPredicted RBP11.68□□□□□ -0.54
CALCOCO2-201ENST00000258947 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
CALCOCO2-201ENST00000258947 SCAF11Q99590 1463 aaKnown RBP11.68□□□□□ -0.54
CALCOCO2-201ENST00000258947 CEP152O94986 1710 aa11.68□□□□□ -0.54
CALCOCO2-201ENST00000258947 SPHKAPQ2M3C7 1700 aa11.68□□□□□ -0.54
CALCOCO2-201ENST00000258947 GPRASP1Q5JY77 1395 aa11.68□□□□□ -0.54
CALCOCO2-201ENST00000258947 EIF2AK4Q9P2K8 1649 aaKnown RBP11.68□□□□□ -0.54
CALCOCO2-201ENST00000258947 ABCC3O15438 1527 aa11.67□□□□□ -0.54
CALCOCO2-201ENST00000258947 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
CALCOCO2-201ENST00000258947 C14orf93Q9H972 538 aaKnown RBP11.67□□□□□ -0.54
CALCOCO2-201ENST00000258947 BCORL1Q5H9F3 1711 aa11.66□□□□□ -0.54
CALCOCO2-201ENST00000258947 PPRC1Q5VV67 1664 aaKnown RBP11.66□□□□□ -0.54
CALCOCO2-201ENST00000258947 FRMPD1Q5SYB0 1578 aa11.66□□□□□ -0.54
CALCOCO2-201ENST00000258947 HDGFP51858 240 aaKnown RBP11.66□□□□□ -0.54
CALCOCO2-201ENST00000258947 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
CALCOCO2-201ENST00000258947 MAP3K4Q9Y6R4 1608 aa11.65□□□□□ -0.54
CALCOCO2-201ENST00000258947 SLC12A5Q9H2X9 1139 aa11.65□□□□□ -0.54
CALCOCO2-201ENST00000258947 PRAM1Q96QH2 718 aa11.64□□□□□ -0.55
CALCOCO2-201ENST00000258947 RNF17Q9BXT8 1623 aaKnown RBP11.64□□□□□ -0.55
CALCOCO2-201ENST00000258947 GLI2P10070 1586 aa11.64□□□□□ -0.55
CALCOCO2-201ENST00000258947 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
CALCOCO2-201ENST00000258947 EVC2Q86UK5 1308 aa11.64□□□□□ -0.55
CALCOCO2-201ENST00000258947 TRPM1Q7Z4N2 1603 aa11.64□□□□□ -0.55
CALCOCO2-201ENST00000258947 MROH1Q8NDA8 1641 aa11.63□□□□□ -0.55
CALCOCO2-201ENST00000258947 MORC1Q86VD1 984 aa11.63□□□□□ -0.55
CALCOCO2-201ENST00000258947 PPP6R1Q9UPN7 881 aa11.63□□□□□ -0.55
CALCOCO2-201ENST00000258947 COL17A1Q9UMD9 1497 aaPredicted RBP11.62□□□□□ -0.55
CALCOCO2-201ENST00000258947 KIF1BO60333 1816 aa11.62□□□□□ -0.55
CALCOCO2-201ENST00000258947 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
CALCOCO2-201ENST00000258947 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
CALCOCO2-201ENST00000258947 ZMYM3Q14202 1370 aa11.61□□□□□ -0.55
CALCOCO2-201ENST00000258947 PNISRQ8TF01 805 aaKnown RBP11.61□□□□□ -0.55
CALCOCO2-201ENST00000258947 LMTK2Q8IWU2 1503 aa11.6□□□□□ -0.55
CALCOCO2-201ENST00000258947 EID1Q9Y6B2 187 aa11.6□□□□□ -0.55
CALCOCO2-201ENST00000258947 PER1O15534 1290 aaPredicted RBP11.59□□□□□ -0.55
CALCOCO2-201ENST00000258947 RICTORQ6R327 1708 aa11.59□□□□□ -0.55
CALCOCO2-201ENST00000258947 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
CALCOCO2-201ENST00000258947 WAPLQ7Z5K2 1190 aa11.59□□□□□ -0.55
CALCOCO2-201ENST00000258947 TXNDC2Q86VQ3 553 aa11.59□□□□□ -0.55
CALCOCO2-201ENST00000258947 ZBED9Q6R2W3 1325 aa11.59□□□□□ -0.55
CALCOCO2-201ENST00000258947 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.59□□□□□ -0.55
CALCOCO2-201ENST00000258947 MADDQ8WXG6 1647 aa11.59□□□□□ -0.55
CALCOCO2-201ENST00000258947 BRD4O60885 1362 aaPredicted RBP11.58□□□□□ -0.55
CALCOCO2-201ENST00000258947 SLC26A8Q96RN1 970 aa11.58□□□□□ -0.56
CALCOCO2-201ENST00000258947 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
CALCOCO2-201ENST00000258947 CAMSAP1Q5T5Y3 1602 aa11.57□□□□□ -0.56
CALCOCO2-201ENST00000258947 PPP2R1AP30153 589 aa11.57□□□□□ -0.56
CALCOCO2-201ENST00000258947 CCDC146Q8IYE0 955 aa11.57□□□□□ -0.56
CALCOCO2-201ENST00000258947 MYOM2P54296 1465 aa11.57□□□□□ -0.56
CALCOCO2-201ENST00000258947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.57□□□□□ -0.56
CALCOCO2-201ENST00000258947 TNRQ92752 1358 aa11.57□□□□□ -0.56
CALCOCO2-201ENST00000258947 ARHGAP31Q2M1Z3 1444 aa11.56□□□□□ -0.56
CALCOCO2-201ENST00000258947 HDGFL2Q7Z4V5 671 aaPredicted RBP11.56□□□□□ -0.56
CALCOCO2-201ENST00000258947 TERF2IPQ9NYB0 399 aa11.56□□□□□ -0.56
CALCOCO2-201ENST00000258947 PIK3C2GO75747 1445 aa11.55□□□□□ -0.56
CALCOCO2-201ENST00000258947 CGNL1Q0VF96 1302 aa11.55□□□□□ -0.56
CALCOCO2-201ENST00000258947 RIMS2Q9UQ26 1411 aa11.55□□□□□ -0.56
CALCOCO2-201ENST00000258947 ADGRB3O60242 1522 aa11.55□□□□□ -0.56
CALCOCO2-201ENST00000258947 CFAP53Q96M91 514 aa11.55□□□□□ -0.56
CALCOCO2-201ENST00000258947 ERVK-7P63135 1459 aa11.55□□□□□ -0.56
CALCOCO2-201ENST00000258947 CDK19Q9BWU1 502 aa11.54□□□□□ -0.56
CALCOCO2-201ENST00000258947 ADAMTS8Q9UP79 889 aa11.54□□□□□ -0.56
CALCOCO2-201ENST00000258947 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
CALCOCO2-201ENST00000258947 GGNBP2Q9H3C7 697 aa11.54□□□□□ -0.56
CALCOCO2-201ENST00000258947 U2SURPO15042 1029 aaKnown RBP11.53□□□□□ -0.56
CALCOCO2-201ENST00000258947 NSD3Q9BZ95 1437 aa11.53□□□□□ -0.56
CALCOCO2-201ENST00000258947 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
CALCOCO2-201ENST00000258947 ZMYM4Q5VZL5 1548 aa11.53□□□□□ -0.56
CALCOCO2-201ENST00000258947 PARD3Q8TEW0 1356 aa11.53□□□□□ -0.56
CALCOCO2-201ENST00000258947 CABP1Q9NZU7 370 aa11.53□□□□□ -0.56
CALCOCO2-201ENST00000258947 MROH2AA6NES4 1674 aa11.52□□□□□ -0.56
CALCOCO2-201ENST00000258947 SOX12O15370 315 aa11.52□□□□□ -0.56
CALCOCO2-201ENST00000258947 PLEKHG5O94827 1062 aa11.52□□□□□ -0.56
CALCOCO2-201ENST00000258947 C14orf37Q86TY3 774 aa11.52□□□□□ -0.56
CALCOCO2-201ENST00000258947 NUDCQ9Y266 331 aa11.51□□□□□ -0.57
CALCOCO2-201ENST00000258947 SYNMO15061 1565 aa11.51□□□□□ -0.57
CALCOCO2-201ENST00000258947 CLTCQ00610 1675 aaKnown RBP11.5□□□□□ -0.57
CALCOCO2-201ENST00000258947 THEMISQ8N1K5 641 aaPredicted RBP11.5□□□□□ -0.57
CALCOCO2-201ENST00000258947 YTHDC2Q9H6S0 1430 aaKnown RBP11.5□□□□□ -0.57
CALCOCO2-201ENST00000258947 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
CALCOCO2-201ENST00000258947 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
CALCOCO2-201ENST00000258947 MTHFSP49914 203 aa11.49□□□□□ -0.57
CALCOCO2-201ENST00000258947 POLR1AO95602 1720 aaPredicted RBP11.48□□□□□ -0.57
CALCOCO2-201ENST00000258947 ARHGEF40Q8TER5 1519 aa11.48□□□□□ -0.57
CALCOCO2-201ENST00000258947 APAF1O14727 1248 aa11.48□□□□□ -0.57
CALCOCO2-201ENST00000258947 NEFMP07197 916 aa11.48□□□□□ -0.57
CALCOCO2-201ENST00000258947 CDCA7LQ96GN5 454 aa11.48□□□□□ -0.57
CALCOCO2-201ENST00000258947 RRP7AQ9Y3A4 280 aaKnown RBP11.48□□□□□ -0.57
CALCOCO2-201ENST00000258947 AGLP35573 1532 aa11.47□□□□□ -0.57
CALCOCO2-201ENST00000258947 KIF13AQ9H1H9 1805 aa11.47□□□□□ -0.57
CALCOCO2-201ENST00000258947 SIGLEC1Q9BZZ2 1709 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms