RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 PPP2R1AP30153 589 aa14.79□□□□□ -0.04
TROAP-201ENST00000257909 MYO5CQ9NQX4 1742 aa14.78□□□□□ -0.04
TROAP-201ENST00000257909 CGNL1Q0VF96 1302 aa14.78□□□□□ -0.04
TROAP-201ENST00000257909 CARMIL2Q6F5E8 1435 aa14.77□□□□□ -0.05
TROAP-201ENST00000257909 NINLQ9Y2I6 1382 aa14.77□□□□□ -0.05
TROAP-201ENST00000257909 A2MP01023 1474 aa14.77□□□□□ -0.05
TROAP-201ENST00000257909 ANTXR1Q9H6X2 564 aa14.76□□□□□ -0.05
TROAP-201ENST00000257909 KNSTRNQ9Y448 316 aa14.76□□□□□ -0.05
TROAP-201ENST00000257909 CHMP7Q8WUX9 453 aaPredicted RBP14.76□□□□□ -0.05
TROAP-201ENST00000257909 SLKQ9H2G2 1235 aaPredicted RBP14.76□□□□□ -0.05
TROAP-201ENST00000257909 PREX2Q70Z35 1606 aa14.76□□□□□ -0.05
TROAP-201ENST00000257909 PDE3AQ14432 1141 aa14.75□□□□□ -0.05
TROAP-201ENST00000257909 JPH4Q96JJ6 628 aa14.75□□□□□ -0.05
TROAP-201ENST00000257909 UPF2Q9HAU5 1272 aaKnown RBP14.75□□□□□ -0.05
TROAP-201ENST00000257909 PIK3C2GO75747 1445 aa14.75□□□□□ -0.05
TROAP-201ENST00000257909 IGHDP01880 384 aa14.75□□□□□ -0.05
TROAP-201ENST00000257909 ZMYM3Q14202 1370 aa14.75□□□□□ -0.05
TROAP-201ENST00000257909 NLRP1Q9C000 1473 aa14.75□□□□□ -0.05
TROAP-201ENST00000257909 GOLGA6L3A6NEY3 463 aa14.74□□□□□ -0.05
TROAP-201ENST00000257909 CCDC141Q6ZP82 1450 aa14.74□□□□□ -0.05
TROAP-201ENST00000257909 RGL3Q3MIN7 710 aa14.74□□□□□ -0.05
TROAP-201ENST00000257909 E9PSI1 815 aa14.73□□□□□ -0.05
TROAP-201ENST00000257909 PLEKHG5O94827 1062 aa14.73□□□□□ -0.05
TROAP-201ENST00000257909 CLCN1P35523 988 aa14.73□□□□□ -0.05
TROAP-201ENST00000257909 HNRNPMP52272 730 aaKnown RBP eCLIP14.73□□□□□ -0.05
TROAP-201ENST00000257909 NGEFQ8N5V2 710 aa14.73□□□□□ -0.05
TROAP-201ENST00000257909 ABCC2Q92887 1545 aa14.73□□□□□ -0.05
TROAP-201ENST00000257909 WDR7Q9Y4E6 1490 aa14.73□□□□□ -0.05
TROAP-201ENST00000257909 SEC24BO95487 1268 aa14.73□□□□□ -0.05
TROAP-201ENST00000257909 PNNQ9H307 717 aaKnown RBP14.73□□□□□ -0.05
TROAP-201ENST00000257909 UNC13BO14795 1591 aa14.73□□□□□ -0.05
TROAP-201ENST00000257909 MAGI2Q86UL8 1455 aa14.73□□□□□ -0.05
TROAP-201ENST00000257909 FSD2A1L4K1 749 aa14.72□□□□□ -0.05
TROAP-201ENST00000257909 PLEKHD1A6NEE1 506 aa14.72□□□□□ -0.05
TROAP-201ENST00000257909 FBLN2P98095 1184 aa14.72□□□□□ -0.05
TROAP-201ENST00000257909 CLUAP1Q96AJ1 413 aa14.72□□□□□ -0.05
TROAP-201ENST00000257909 PLA2R1Q13018 1463 aa14.72□□□□□ -0.05
TROAP-201ENST00000257909 BCAR3O75815 825 aa14.71□□□□□ -0.05
TROAP-201ENST00000257909 XRCC6P12956 609 aaKnown RBP eCLIP14.71□□□□□ -0.05
TROAP-201ENST00000257909 AAMPQ13685 434 aa14.71□□□□□ -0.05
TROAP-201ENST00000257909 AMER1Q5JTC6 1135 aaPredicted RBP14.71□□□□□ -0.05
TROAP-201ENST00000257909 RNF17Q9BXT8 1623 aaKnown RBP14.71□□□□□ -0.06
TROAP-201ENST00000257909 TBC1D32Q96NH3 1257 aa14.7□□□□□ -0.06
TROAP-201ENST00000257909 SYNMO15061 1565 aa14.7□□□□□ -0.06
TROAP-201ENST00000257909 PLXNC1O60486 1568 aa14.7□□□□□ -0.06
TROAP-201ENST00000257909 CDCA8Q53HL2 280 aa14.7□□□□□ -0.06
TROAP-201ENST00000257909 NAP1L5Q96NT1 182 aaPredicted RBP14.7□□□□□ -0.06
TROAP-201ENST00000257909 NPC1L1Q9UHC9 1359 aa14.7□□□□□ -0.06
TROAP-201ENST00000257909 ASXL1Q8IXJ9 1541 aa14.7□□□□□ -0.06
TROAP-201ENST00000257909 RRP9O43818 475 aaKnown RBP14.69□□□□□ -0.06
TROAP-201ENST00000257909 PMFBP1Q8TBY8 1022 aa14.68□□□□□ -0.06
TROAP-201ENST00000257909 TBC1D2Q9BYX2 928 aa14.68□□□□□ -0.06
TROAP-201ENST00000257909 SYCP2Q9BX26 1530 aa14.68□□□□□ -0.06
TROAP-201ENST00000257909 HSP90AA1P07900 732 aaKnown RBP14.68□□□□□ -0.06
TROAP-201ENST00000257909 MCM4P33991 863 aa14.68□□□□□ -0.06
TROAP-201ENST00000257909 RSPH4AQ5TD94 716 aa14.68□□□□□ -0.06
TROAP-201ENST00000257909 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
TROAP-201ENST00000257909 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
TROAP-201ENST00000257909 PODXL2Q9NZ53 605 aa14.68□□□□□ -0.06
TROAP-201ENST00000257909 IQGAP3Q86VI3 1631 aa14.67□□□□□ -0.06
TROAP-201ENST00000257909 MAST1Q9Y2H9 1570 aa14.67□□□□□ -0.06
TROAP-201ENST00000257909 APAF1O14727 1248 aa14.67□□□□□ -0.06
TROAP-201ENST00000257909 HSP90AA2PQ14568 343 aaPredicted RBP14.67□□□□□ -0.06
TROAP-201ENST00000257909 ERCC6Q03468 1493 aa14.67□□□□□ -0.06
TROAP-201ENST00000257909 MRE11P49959 708 aa14.66□□□□□ -0.06
TROAP-201ENST00000257909 CENPJQ9HC77 1338 aaPredicted RBP14.66□□□□□ -0.06
TROAP-201ENST00000257909 CANXP27824 592 aaKnown RBP14.66□□□□□ -0.06
TROAP-201ENST00000257909 CCDC146Q8IYE0 955 aa14.66□□□□□ -0.06
TROAP-201ENST00000257909 ISY1Q9ULR0 285 aaKnown RBP14.65□□□□□ -0.06
TROAP-201ENST00000257909 ATP10AO60312 1499 aa14.65□□□□□ -0.06
TROAP-201ENST00000257909 COG6Q9Y2V7 657 aa14.64□□□□□ -0.07
TROAP-201ENST00000257909 IQGAP1P46940 1657 aa14.64□□□□□ -0.07
TROAP-201ENST00000257909 CHMP5Q9NZZ3 219 aa14.64□□□□□ -0.07
TROAP-201ENST00000257909 PANK1Q8TE04 598 aa14.62□□□□□ -0.07
TROAP-201ENST00000257909 PANK2Q9BZ23 570 aa14.62□□□□□ -0.07
TROAP-201ENST00000257909 TRAK2O60296 914 aa14.62□□□□□ -0.07
TROAP-201ENST00000257909 ARXQ96QS3 562 aa14.61□□□□□ -0.07
TROAP-201ENST00000257909 VSIG10Q8N0Z9 540 aa14.61□□□□□ -0.07
TROAP-201ENST00000257909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.61□□□□□ -0.07
TROAP-201ENST00000257909 GZF1Q9H116 711 aaPredicted RBP14.6□□□□□ -0.07
TROAP-201ENST00000257909 MYH16Q9H6N6 1097 aa14.6□□□□□ -0.07
TROAP-201ENST00000257909 DDX11L8A8MPP1 907 aa14.6□□□□□ -0.07
TROAP-201ENST00000257909 ZMYND15Q9H091 742 aa14.59□□□□□ -0.07
TROAP-201ENST00000257909 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
TROAP-201ENST00000257909 MYOM1P52179 1685 aa14.59□□□□□ -0.07
TROAP-201ENST00000257909 ARHGAP5Q13017 1502 aa14.59□□□□□ -0.07
TROAP-201ENST00000257909 RWDD1Q9H446 243 aaPredicted RBP14.59□□□□□ -0.07
TROAP-201ENST00000257909 GRPEL1Q9HAV7 217 aa14.58□□□□□ -0.07
TROAP-201ENST00000257909 SCAF11Q99590 1463 aaKnown RBP14.58□□□□□ -0.07
TROAP-201ENST00000257909 MADDQ8WXG6 1647 aa14.58□□□□□ -0.08
TROAP-201ENST00000257909 SCAPERQ9BY12 1400 aa14.58□□□□□ -0.08
TROAP-201ENST00000257909 ESPNB1AK53 854 aa14.58□□□□□ -0.08
TROAP-201ENST00000257909 WWC1Q8IX03 1113 aa14.58□□□□□ -0.08
TROAP-201ENST00000257909 DMRT2Q9Y5R5 561 aa14.58□□□□□ -0.08
TROAP-201ENST00000257909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.081e-6■■■■□ 20.1
TROAP-201ENST00000257909 STAC3Q96MF2 364 aa14.57□□□□□ -0.08
TROAP-201ENST00000257909 PCDHB15Q9Y5E8 787 aa14.57□□□□□ -0.08
TROAP-201ENST00000257909 CHD1O14646 1710 aa14.57□□□□□ -0.08
TROAP-201ENST00000257909 C22orf23Q9BZE7 217 aa14.56□□□□□ -0.08
TROAP-201ENST00000257909 KDM5AP29375 1690 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms