RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 RCAN3Q9UKA8 241 aa21.05■□□□□ 0.96
SORT1-201ENST00000256637 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
SORT1-201ENST00000256637 PPP4R2Q9NY27 417 aa21.04■□□□□ 0.96
SORT1-201ENST00000256637 AKAP17AQ02040 695 aaKnown RBP21.04■□□□□ 0.96
SORT1-201ENST00000256637 RBM5P52756 815 aaKnown RBP eCLIP21.04■□□□□ 0.96
SORT1-201ENST00000256637 SLKQ9H2G2 1235 aaPredicted RBP21.04■□□□□ 0.96
SORT1-201ENST00000256637 HMMRO75330 724 aa21.03■□□□□ 0.96
SORT1-201ENST00000256637 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
SORT1-201ENST00000256637 NAP1L5Q96NT1 182 aaPredicted RBP21.03■□□□□ 0.96
SORT1-201ENST00000256637 CHMP4CQ96CF2 233 aa21.03■□□□□ 0.96
SORT1-201ENST00000256637 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
SORT1-201ENST00000256637 NEUROD6Q96NK8 337 aa21.02■□□□□ 0.96
SORT1-201ENST00000256637 ZNF219Q9P2Y4 722 aaPredicted RBP21.02■□□□□ 0.96
SORT1-201ENST00000256637 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
SORT1-201ENST00000256637 SLC26A8Q96RN1 970 aa21.01■□□□□ 0.95
SORT1-201ENST00000256637 RWDD1Q9H446 243 aaPredicted RBP21.01■□□□□ 0.95
SORT1-201ENST00000256637 TSPYL4Q9UJ04 414 aa21.01■□□□□ 0.95
SORT1-201ENST00000256637 CGNL1Q0VF96 1302 aa21.01■□□□□ 0.95
SORT1-201ENST00000256637 ANKRD45Q5TZF3 282 aa21.01■□□□□ 0.95
SORT1-201ENST00000256637 GGNBP2Q9H3C7 697 aa21.01■□□□□ 0.95
SORT1-201ENST00000256637 RAPGEF3O95398 923 aa21■□□□□ 0.95
SORT1-201ENST00000256637 MCTP1Q6DN14 999 aa20.99■□□□□ 0.95
SORT1-201ENST00000256637 NRDCO43847 1150 aa20.99■□□□□ 0.95
SORT1-201ENST00000256637 ATP2B2Q01814 1243 aa20.99■□□□□ 0.95
SORT1-201ENST00000256637 CHAF1AQ13111 956 aaPredicted RBP20.99■□□□□ 0.95
SORT1-201ENST00000256637 WWC3Q9ULE0 1092 aa20.99■□□□□ 0.95
SORT1-201ENST00000256637 NESP48681 1621 aa20.99■□□□□ 0.95
SORT1-201ENST00000256637 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
SORT1-201ENST00000256637 PDE3BQ13370 1112 aa20.99■□□□□ 0.95
SORT1-201ENST00000256637 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
SORT1-201ENST00000256637 H3BQV1 296 aa20.98■□□□□ 0.95
SORT1-201ENST00000256637 IFFO2Q5TF58 517 aa20.98■□□□□ 0.95
SORT1-201ENST00000256637 CFAP44Q96MT7 982 aa20.97■□□□□ 0.95
SORT1-201ENST00000256637 RUSC2Q8N2Y8 1516 aa20.97■□□□□ 0.95
SORT1-201ENST00000256637 NFXL1Q6ZNB6 911 aa20.96■□□□□ 0.95
SORT1-201ENST00000256637 KIF6Q6ZMV9 814 aa20.96■□□□□ 0.95
SORT1-201ENST00000256637 FGD5Q6ZNL6 1462 aa20.96■□□□□ 0.95
SORT1-201ENST00000256637 SF3A1Q15459 793 aaKnown RBP20.96■□□□□ 0.95
SORT1-201ENST00000256637 GRM1Q13255 1194 aa20.96■□□□□ 0.95
SORT1-201ENST00000256637 MYCNP04198 464 aaPredicted RBP20.96■□□□□ 0.95
SORT1-201ENST00000256637 RIPK4P57078 832 aa20.96■□□□□ 0.95
SORT1-201ENST00000256637 FKBP5Q13451 457 aaPredicted RBP20.96■□□□□ 0.95
SORT1-201ENST00000256637 VPS8Q8N3P4 1428 aa20.96■□□□□ 0.95
SORT1-201ENST00000256637 UACAQ9BZF9 1416 aa20.95■□□□□ 0.95
SORT1-201ENST00000256637 RSPH4AQ5TD94 716 aa20.95■□□□□ 0.94
SORT1-201ENST00000256637 TPD52L1Q16890 204 aaPredicted RBP20.95■□□□□ 0.94
SORT1-201ENST00000256637 RALBP1Q15311 655 aa20.95■□□□□ 0.94
SORT1-201ENST00000256637 SPINK5Q9NQ38 1064 aaPredicted RBP20.95■□□□□ 0.94
SORT1-201ENST00000256637 GPRASP1Q5JY77 1395 aa20.95■□□□□ 0.94
SORT1-201ENST00000256637 DIAPH1O60610 1272 aaKnown RBP20.94■□□□□ 0.94
SORT1-201ENST00000256637 A0A0U1RQG5 324 aaPredicted RBP20.94■□□□□ 0.94
SORT1-201ENST00000256637 CCDC43Q96MW1 224 aaKnown RBP20.94■□□□□ 0.94
SORT1-201ENST00000256637 SYNE3Q6ZMZ3 975 aa20.93■□□□□ 0.94
SORT1-201ENST00000256637 TMEM132AQ24JP5 1023 aa20.93■□□□□ 0.94
SORT1-201ENST00000256637 ANP32EQ9BTT0 268 aa20.93■□□□□ 0.94
SORT1-201ENST00000256637 MYL6BP14649 208 aa20.92■□□□□ 0.94
SORT1-201ENST00000256637 CHMP4BP1P59074 171 aa20.92■□□□□ 0.94
SORT1-201ENST00000256637 FAM184AQ8NB25 1140 aa20.91■□□□□ 0.94
SORT1-201ENST00000256637 IFIT2P09913 472 aaKnown RBP20.91■□□□□ 0.94
SORT1-201ENST00000256637 CEP89Q96ST8 783 aa20.91■□□□□ 0.94
SORT1-201ENST00000256637 CHMP4AQ9BY43 222 aa20.91■□□□□ 0.94
SORT1-201ENST00000256637 KIF16BQ96L93 1317 aa20.9■□□□□ 0.94
SORT1-201ENST00000256637 ZC3H6P61129 1189 aaKnown RBP20.9■□□□□ 0.94
SORT1-201ENST00000256637 DDX58O95786 925 aaKnown RBP20.9■□□□□ 0.94
SORT1-201ENST00000256637 HDAC5Q9UQL6 1122 aa20.89■□□□□ 0.94
SORT1-201ENST00000256637 WASHC4Q2M389 1173 aa20.89■□□□□ 0.93
SORT1-201ENST00000256637 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.93
SORT1-201ENST00000256637 PRG4Q92954 1404 aaPredicted RBP20.89■□□□□ 0.93
SORT1-201ENST00000256637 CABP4P57796 275 aa20.88■□□□□ 0.93
SORT1-201ENST00000256637 ANO2Q9NQ90 1003 aa20.88■□□□□ 0.93
SORT1-201ENST00000256637 PRAM1Q96QH2 718 aa20.87■□□□□ 0.93
SORT1-201ENST00000256637 ECM2O94769 699 aaPredicted RBP20.87■□□□□ 0.93
SORT1-201ENST00000256637 GLIPR1L2Q4G1C9 344 aa20.87■□□□□ 0.93
SORT1-201ENST00000256637 G3BP1Q13283 466 aaKnown RBP eCLIP20.86■□□□□ 0.938e-6■□□□□ 9
SORT1-201ENST00000256637 ANKLE2Q86XL3 938 aa20.85■□□□□ 0.93
SORT1-201ENST00000256637 DIAPH3Q9NSV4 1193 aa20.85■□□□□ 0.93
SORT1-201ENST00000256637 DHX57Q6P158 1386 aaKnown RBP20.85■□□□□ 0.93
SORT1-201ENST00000256637 PCMTD1Q96MG8 357 aaPredicted RBP20.85■□□□□ 0.93
SORT1-201ENST00000256637 NOP58Q9Y2X3 529 aaKnown RBP20.84■□□□□ 0.93
SORT1-201ENST00000256637 TPM4P67936 248 aa20.84■□□□□ 0.93
SORT1-201ENST00000256637 CCDC85AQ96PX6 553 aaPredicted RBP20.84■□□□□ 0.93
SORT1-201ENST00000256637 CEBPAP49715 358 aaPredicted RBP20.84■□□□□ 0.93
SORT1-201ENST00000256637 PHF14O94880 888 aa20.83■□□□□ 0.92
SORT1-201ENST00000256637 ERICH2A1L162 156 aa20.82■□□□□ 0.92
SORT1-201ENST00000256637 RRP12Q5JTH9 1297 aaKnown RBP20.81■□□□□ 0.92
SORT1-201ENST00000256637 NGLY1Q96IV0 654 aa20.81■□□□□ 0.92
SORT1-201ENST00000256637 CNNM1Q9NRU3 951 aa20.81■□□□□ 0.92
SORT1-201ENST00000256637 APAF1O14727 1248 aa20.81■□□□□ 0.92
SORT1-201ENST00000256637 THEMISQ8N1K5 641 aaPredicted RBP20.81■□□□□ 0.92
SORT1-201ENST00000256637 HTATSF1O43719 755 aaKnown RBP20.81■□□□□ 0.92
SORT1-201ENST00000256637 DNAJC2Q99543 621 aaKnown RBP20.81■□□□□ 0.92
SORT1-201ENST00000256637 MSNP26038 577 aaKnown RBP20.8■□□□□ 0.92
SORT1-201ENST00000256637 TTLL12Q14166 644 aaPredicted RBP20.8■□□□□ 0.92
SORT1-201ENST00000256637 TATP17735 454 aaPredicted RBP20.8■□□□□ 0.92
SORT1-201ENST00000256637 PRDM11Q9NQV5 511 aa20.8■□□□□ 0.92
SORT1-201ENST00000256637 TRIM29Q14134 588 aa20.79■□□□□ 0.92
SORT1-201ENST00000256637 ZSCAN29Q8IWY8 852 aaPredicted RBP20.78■□□□□ 0.92
SORT1-201ENST00000256637 COG6Q9Y2V7 657 aa20.78■□□□□ 0.92
SORT1-201ENST00000256637 CDK19Q9BWU1 502 aa20.76■□□□□ 0.91
SORT1-201ENST00000256637 SIL1Q9H173 461 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms