RNA–Protein interactions for RNA: ENST00000256443.7

CDK7-201, Transcript of cyclin dependent kinase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK7, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-201ENST00000256443 ZNF335Q9H4Z2 1342 aaPredicted RBP19.17■□□□□ 0.66
CDK7-201ENST00000256443 RIMS2Q9UQ26 1411 aa19.16■□□□□ 0.66
CDK7-201ENST00000256443 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.16■□□□□ 0.66
CDK7-201ENST00000256443 IQSEC2Q5JU85 1478 aa19.15■□□□□ 0.66
CDK7-201ENST00000256443 CPS1P31327 1500 aa19.14■□□□□ 0.65
CDK7-201ENST00000256443 PPP1R15AO75807 674 aaPredicted RBP19.12■□□□□ 0.65
CDK7-201ENST00000256443 PLEKHG1Q9ULL1 1385 aa19.12■□□□□ 0.65
CDK7-201ENST00000256443 FBXO41Q8TF61 875 aa19.11■□□□□ 0.65
CDK7-201ENST00000256443 CCDC144AA2RUR9 1427 aa19.09■□□□□ 0.65
CDK7-201ENST00000256443 ZNF326Q5BKZ1 582 aaKnown RBP19.08■□□□□ 0.65
CDK7-201ENST00000256443 FOXD1Q16676 465 aa19.08■□□□□ 0.64
CDK7-201ENST00000256443 BCANQ96GW7 911 aa19.07■□□□□ 0.64
CDK7-201ENST00000256443 STRCP1A6NGW2 1772 aa19.06■□□□□ 0.64
CDK7-201ENST00000256443 DIP2AQ14689 1571 aa19.06■□□□□ 0.64
CDK7-201ENST00000256443 NEXMIFQ5QGS0 1516 aa19.05■□□□□ 0.64
CDK7-201ENST00000256443 ILDR1Q86SU0 546 aaPredicted RBP19.05■□□□□ 0.64
CDK7-201ENST00000256443 SLC26A8Q96RN1 970 aa19.04■□□□□ 0.64
CDK7-201ENST00000256443 RPGRIP1LQ68CZ1 1315 aa19.03■□□□□ 0.64
CDK7-201ENST00000256443 NUTM2DQ5VT03 806 aaPredicted RBP19.02■□□□□ 0.64
CDK7-201ENST00000256443 TBX22Q9Y458 520 aa19.02■□□□□ 0.64
CDK7-201ENST00000256443 SETBP1Q9Y6X0 1596 aa19.01■□□□□ 0.63
CDK7-201ENST00000256443 NWD1Q149M9 1564 aa19.01■□□□□ 0.63
CDK7-201ENST00000256443 PPLO60437 1756 aa19■□□□□ 0.63
CDK7-201ENST00000256443 KCNA6P17658 529 aa19■□□□□ 0.63
CDK7-201ENST00000256443 CHD2O14647 1828 aaKnown RBP19■□□□□ 0.63
CDK7-201ENST00000256443 ADAMTS13Q76LX8 1427 aa19■□□□□ 0.63
CDK7-201ENST00000256443 LRRC7Q96NW7 1537 aa18.99■□□□□ 0.63
CDK7-201ENST00000256443 PIK3R4Q99570 1358 aa18.99■□□□□ 0.63
CDK7-201ENST00000256443 VGFO15240 615 aaPredicted RBP18.99■□□□□ 0.63
CDK7-201ENST00000256443 NRXN3Q9Y4C0 1643 aa18.98■□□□□ 0.63
CDK7-201ENST00000256443 SPATA31E1Q6ZUB1 1445 aa18.98■□□□□ 0.63
CDK7-201ENST00000256443 NKTRP30414 1462 aaKnown RBP18.98■□□□□ 0.63
CDK7-201ENST00000256443 TRIM26Q12899 539 aaPredicted RBP18.97■□□□□ 0.63
CDK7-201ENST00000256443 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
CDK7-201ENST00000256443 IFT172Q9UG01 1749 aa18.96■□□□□ 0.63
CDK7-201ENST00000256443 SENP3Q9H4L4 574 aaPredicted RBP18.95■□□□□ 0.62
CDK7-201ENST00000256443 XIRP1Q702N8 1843 aaKnown RBP18.94■□□□□ 0.62
CDK7-201ENST00000256443 RGL3Q3MIN7 710 aa18.92■□□□□ 0.62
CDK7-201ENST00000256443 UBAP1LF5GYI3 381 aa18.91■□□□□ 0.62
CDK7-201ENST00000256443 TOM1O60784 492 aa18.91■□□□□ 0.62
CDK7-201ENST00000256443 PROSER2Q86WR7 435 aaPredicted RBP18.91■□□□□ 0.62
CDK7-201ENST00000256443 SETD1AO15047 1707 aaKnown RBP18.89■□□□□ 0.62
CDK7-201ENST00000256443 TMEM94Q12767 1356 aa18.89■□□□□ 0.61
CDK7-201ENST00000256443 XRN1Q8IZH2 1706 aaKnown RBP18.88■□□□□ 0.61
CDK7-201ENST00000256443 ALKQ9UM73 1620 aa18.88■□□□□ 0.61
CDK7-201ENST00000256443 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
CDK7-201ENST00000256443 AMOTL2Q9Y2J4 779 aa18.87■□□□□ 0.61
CDK7-201ENST00000256443 PTPRUQ92729 1446 aa18.86■□□□□ 0.61
CDK7-201ENST00000256443 METP08581 1390 aa18.86■□□□□ 0.61
CDK7-201ENST00000256443 MYOM2P54296 1465 aa18.86■□□□□ 0.61
CDK7-201ENST00000256443 ADGRF5Q8IZF2 1346 aa18.85■□□□□ 0.61
CDK7-201ENST00000256443 PIK3C2GO75747 1445 aa18.83■□□□□ 0.6
CDK7-201ENST00000256443 STAC3Q96MF2 364 aa18.83■□□□□ 0.6
CDK7-201ENST00000256443 MSH6P52701 1360 aa18.83■□□□□ 0.6
CDK7-201ENST00000256443 LAMC1P11047 1609 aa18.82■□□□□ 0.6
CDK7-201ENST00000256443 NRXN1Q9ULB1 1477 aa18.82■□□□□ 0.6
CDK7-201ENST00000256443 PRAG1Q86YV5 1406 aa18.81■□□□□ 0.6
CDK7-201ENST00000256443 PIP4K2BP78356 416 aa18.79■□□□□ 0.6
CDK7-201ENST00000256443 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
CDK7-201ENST00000256443 PTCH1Q13635 1447 aa18.79■□□□□ 0.6
CDK7-201ENST00000256443 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
CDK7-201ENST00000256443 C14orf37Q86TY3 774 aa18.77■□□□□ 0.6
CDK7-201ENST00000256443 DHX57Q6P158 1386 aaKnown RBP18.77■□□□□ 0.59
CDK7-201ENST00000256443 C19orf44Q9H6X5 657 aa18.76■□□□□ 0.59
CDK7-201ENST00000256443 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.76■□□□□ 0.59
CDK7-201ENST00000256443 DCAF11Q8TEB1 546 aa18.75■□□□□ 0.59
CDK7-201ENST00000256443 C14orf93Q9H972 538 aaKnown RBP18.75■□□□□ 0.59
CDK7-201ENST00000256443 KNDC1Q76NI1 1749 aa18.75■□□□□ 0.59
CDK7-201ENST00000256443 DCCP43146 1447 aa18.74■□□□□ 0.59
CDK7-201ENST00000256443 CADPS2Q86UW7 1296 aa18.74■□□□□ 0.59
CDK7-201ENST00000256443 ASXL1Q8IXJ9 1541 aa18.73■□□□□ 0.59
CDK7-201ENST00000256443 LRPPRCP42704 1394 aaKnown RBP18.73■□□□□ 0.59
CDK7-201ENST00000256443 TECPR2O15040 1411 aa18.73■□□□□ 0.59
CDK7-201ENST00000256443 FAM135BQ49AJ0 1406 aa18.73■□□□□ 0.59
CDK7-201ENST00000256443 KDM2AQ9Y2K7 1162 aa18.72■□□□□ 0.59
CDK7-201ENST00000256443 ADGRL3Q9HAR2 1447 aa18.72■□□□□ 0.59
CDK7-201ENST00000256443 ATF3P18847 181 aa18.71■□□□□ 0.59
CDK7-201ENST00000256443 NALCNQ8IZF0 1738 aa18.71■□□□□ 0.59
CDK7-201ENST00000256443 ABCC11Q96J66 1382 aa18.71■□□□□ 0.59
CDK7-201ENST00000256443 ROBO2Q9HCK4 1378 aa18.71■□□□□ 0.59
CDK7-201ENST00000256443 YTHDC2Q9H6S0 1430 aaKnown RBP18.7■□□□□ 0.58
CDK7-201ENST00000256443 CFAP70Q5T0N1 1121 aa18.7■□□□□ 0.58
CDK7-201ENST00000256443 ROBO1Q9Y6N7 1651 aa18.7■□□□□ 0.58
CDK7-201ENST00000256443 TMEM132EQ6IEE7 984 aa18.69■□□□□ 0.58
CDK7-201ENST00000256443 SLAIN2Q9P270 581 aa18.69■□□□□ 0.58
CDK7-201ENST00000256443 KIAA1210Q9ULL0 1709 aa18.67■□□□□ 0.58
CDK7-201ENST00000256443 HSPA1LP34931 641 aa18.66■□□□□ 0.58
CDK7-201ENST00000256443 SIRT1Q96EB6 747 aa18.66■□□□□ 0.58
CDK7-201ENST00000256443 STK26Q9P289 416 aa18.66■□□□□ 0.58
CDK7-201ENST00000256443 ADGRB1O14514 1584 aa18.66■□□□□ 0.58
CDK7-201ENST00000256443 SIN3AQ96ST3 1273 aa18.65■□□□□ 0.58
CDK7-201ENST00000256443 DLC1Q96QB1 1528 aa18.64■□□□□ 0.57
CDK7-201ENST00000256443 MST1RQ04912 1400 aa18.63■□□□□ 0.57
CDK7-201ENST00000256443 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
CDK7-201ENST00000256443 CDC42BPGQ6DT37 1551 aa18.62■□□□□ 0.57
CDK7-201ENST00000256443 L3MBTL2Q969R5 705 aa18.61■□□□□ 0.57
CDK7-201ENST00000256443 PCGF6Q9BYE7 350 aa18.61■□□□□ 0.57
CDK7-201ENST00000256443 WAPLQ7Z5K2 1190 aa18.6■□□□□ 0.57
CDK7-201ENST00000256443 PHLPP1O60346 1717 aa18.59■□□□□ 0.57
CDK7-201ENST00000256443 PLEKHH1Q9ULM0 1364 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms