RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 CROCC2H7BZ55 1655 aa20.31■□□□□ 0.84
SLC6A8-201ENST00000253122 AFAP1Q8N556 730 aa20.31■□□□□ 0.84
SLC6A8-201ENST00000253122 CHGAP10645 457 aaKnown RBP20.31■□□□□ 0.84
SLC6A8-201ENST00000253122 POGKQ9P215 609 aa20.31■□□□□ 0.84
SLC6A8-201ENST00000253122 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
SLC6A8-201ENST00000253122 WASHC2CQ9Y4E1 1318 aa20.29■□□□□ 0.84
SLC6A8-201ENST00000253122 FTSJ3Q8IY81 847 aaKnown RBP20.29■□□□□ 0.84
SLC6A8-201ENST00000253122 CDCA8Q53HL2 280 aa20.29■□□□□ 0.84
SLC6A8-201ENST00000253122 FANCAO15360 1455 aa20.28■□□□□ 0.84
SLC6A8-201ENST00000253122 BCL2L13Q9BXK5 485 aa20.28■□□□□ 0.84
SLC6A8-201ENST00000253122 FAM43AQ8N2R8 423 aa20.27■□□□□ 0.84
SLC6A8-201ENST00000253122 ARID3AQ99856 593 aa20.27■□□□□ 0.84
SLC6A8-201ENST00000253122 MFAP1P55081 439 aaKnown RBP20.26■□□□□ 0.83
SLC6A8-201ENST00000253122 BCAR3O75815 825 aa20.25■□□□□ 0.83
SLC6A8-201ENST00000253122 SCAPERQ9BY12 1400 aa20.25■□□□□ 0.83
SLC6A8-201ENST00000253122 ADGRL1O94910 1474 aa20.24■□□□□ 0.83
SLC6A8-201ENST00000253122 PANK1Q8TE04 598 aa20.24■□□□□ 0.83
SLC6A8-201ENST00000253122 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
SLC6A8-201ENST00000253122 PZPP20742 1482 aa20.24■□□□□ 0.83
SLC6A8-201ENST00000253122 TRAPPC8Q9Y2L5 1435 aa20.24■□□□□ 0.83
SLC6A8-201ENST00000253122 HSP90AA2PQ14568 343 aaPredicted RBP20.23■□□□□ 0.83
SLC6A8-201ENST00000253122 CENPJQ9HC77 1338 aaPredicted RBP20.23■□□□□ 0.83
SLC6A8-201ENST00000253122 NCLP19338 710 aaKnown RBP20.23■□□□□ 0.83
SLC6A8-201ENST00000253122 CD109Q6YHK3 1445 aa20.23■□□□□ 0.83
SLC6A8-201ENST00000253122 HSCBQ8IWL3 235 aa20.22■□□□□ 0.83
SLC6A8-201ENST00000253122 UBE2Q2Q8WVN8 375 aa20.21■□□□□ 0.83
SLC6A8-201ENST00000253122 MYH16Q9H6N6 1097 aa20.21■□□□□ 0.83
SLC6A8-201ENST00000253122 ZBTB7CA1YPR0 619 aa20.2■□□□□ 0.82
SLC6A8-201ENST00000253122 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
SLC6A8-201ENST00000253122 ABCC1P33527 1531 aa20.2■□□□□ 0.82
SLC6A8-201ENST00000253122 MAPK8IP3Q9UPT6 1336 aa20.19■□□□□ 0.82
SLC6A8-201ENST00000253122 KANK1Q14678 1352 aa20.19■□□□□ 0.82
SLC6A8-201ENST00000253122 ARAP3Q8WWN8 1544 aa20.18■□□□□ 0.82
SLC6A8-201ENST00000253122 KIF3BO15066 747 aa20.18■□□□□ 0.82
SLC6A8-201ENST00000253122 CCDC144AA2RUR9 1427 aa20.17■□□□□ 0.82
SLC6A8-201ENST00000253122 TPRNQ4KMQ1 711 aa20.17■□□□□ 0.82
SLC6A8-201ENST00000253122 DUOX2Q9NRD8 1548 aa20.17■□□□□ 0.82
SLC6A8-201ENST00000253122 ARHGEF12Q9NZN5 1544 aa20.17■□□□□ 0.82
SLC6A8-201ENST00000253122 DENND4BO75064 1496 aaPredicted RBP20.17■□□□□ 0.82
SLC6A8-201ENST00000253122 FOXD4L1Q9NU39 408 aa20.17■□□□□ 0.82
SLC6A8-201ENST00000253122 RWDD1Q9H446 243 aaPredicted RBP20.16■□□□□ 0.82
SLC6A8-201ENST00000253122 CGNL1Q0VF96 1302 aa20.16■□□□□ 0.82
SLC6A8-201ENST00000253122 PMFBP1Q8TBY8 1022 aa20.16■□□□□ 0.82
SLC6A8-201ENST00000253122 PPP2R1AP30153 589 aa20.15■□□□□ 0.82
SLC6A8-201ENST00000253122 C8orf34Q49A92 452 aa20.15■□□□□ 0.82
SLC6A8-201ENST00000253122 MAST1Q9Y2H9 1570 aa20.15■□□□□ 0.82
SLC6A8-201ENST00000253122 E9PSI1 815 aa20.15■□□□□ 0.82
SLC6A8-201ENST00000253122 ABCA9Q8IUA7 1624 aa20.14■□□□□ 0.81
SLC6A8-201ENST00000253122 SPATA31E1Q6ZUB1 1445 aa20.14■□□□□ 0.81
SLC6A8-201ENST00000253122 GOLGA6L22H0YM25 854 aa20.13■□□□□ 0.81
SLC6A8-201ENST00000253122 ERBINQ96RT1 1412 aa20.13■□□□□ 0.81
SLC6A8-201ENST00000253122 RTEL1-TNFRSF6BF6WH68 1400 aa20.12■□□□□ 0.81
SLC6A8-201ENST00000253122 FAM69CQ0P6D2 419 aa20.11■□□□□ 0.81
SLC6A8-201ENST00000253122 DUSP27Q5VZP5 1158 aa20.11■□□□□ 0.81
SLC6A8-201ENST00000253122 MORC1Q86VD1 984 aa20.11■□□□□ 0.81
SLC6A8-201ENST00000253122 FAM135AQ9P2D6 1515 aa20.11■□□□□ 0.81
SLC6A8-201ENST00000253122 LRPPRCP42704 1394 aaKnown RBP20.1■□□□□ 0.81
SLC6A8-201ENST00000253122 PLXNC1O60486 1568 aa20.1■□□□□ 0.81
SLC6A8-201ENST00000253122 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
SLC6A8-201ENST00000253122 TEX14Q8IWB6 1497 aa20.08■□□□□ 0.8
SLC6A8-201ENST00000253122 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
SLC6A8-201ENST00000253122 ITPRIPQ8IWB1 547 aa20.07■□□□□ 0.8
SLC6A8-201ENST00000253122 TRAK2O60296 914 aa20.07■□□□□ 0.8
SLC6A8-201ENST00000253122 IGHDP01880 384 aa20.07■□□□□ 0.8
SLC6A8-201ENST00000253122 ATP7AQ04656 1500 aa20.06■□□□□ 0.8
SLC6A8-201ENST00000253122 ZNF518AQ6AHZ1 1483 aa20.06■□□□□ 0.8
SLC6A8-201ENST00000253122 PKNOX2Q96KN3 472 aa20.06■□□□□ 0.8
SLC6A8-201ENST00000253122 KDM5DQ9BY66 1539 aa20.06■□□□□ 0.8
SLC6A8-201ENST00000253122 SLFN5Q08AF3 891 aa20.06■□□□□ 0.8
SLC6A8-201ENST00000253122 CHMP5Q9NZZ3 219 aa20.06■□□□□ 0.8
SLC6A8-201ENST00000253122 GGT6Q6P531 493 aa20.05■□□□□ 0.8
SLC6A8-201ENST00000253122 PDZRN3Q9UPQ7 1066 aa20.04■□□□□ 0.8
SLC6A8-201ENST00000253122 U2AF1L5P0DN76 240 aaPredicted RBP20.04■□□□□ 0.8
SLC6A8-201ENST00000253122 U2AF1Q01081 240 aaKnown RBP eCLIP20.04■□□□□ 0.8
SLC6A8-201ENST00000253122 MSNP26038 577 aaKnown RBP20.04■□□□□ 0.8
SLC6A8-201ENST00000253122 GBP4Q96PP9 640 aa20.04■□□□□ 0.8
SLC6A8-201ENST00000253122 SEC24BO95487 1268 aa20.03■□□□□ 0.8
SLC6A8-201ENST00000253122 RAPGEF3O95398 923 aa20.03■□□□□ 0.8
SLC6A8-201ENST00000253122 C22orf23Q9BZE7 217 aa20.03■□□□□ 0.8
SLC6A8-201ENST00000253122 SMC4Q9NTJ3 1288 aa20.02■□□□□ 0.8
SLC6A8-201ENST00000253122 CFAP74Q9C0B2 1584 aa20.02■□□□□ 0.79
SLC6A8-201ENST00000253122 ZFYVE16Q7Z3T8 1539 aa20.02■□□□□ 0.79
SLC6A8-201ENST00000253122 MCM4P33991 863 aa20.01■□□□□ 0.79
SLC6A8-201ENST00000253122 RIMBP3CA6NJZ7 1639 aa20■□□□□ 0.79
SLC6A8-201ENST00000253122 RIMBP3BA6NNM3 1639 aa20■□□□□ 0.79
SLC6A8-201ENST00000253122 RIMBP3Q9UFD9 1639 aa20■□□□□ 0.79
SLC6A8-201ENST00000253122 PANK2Q9BZ23 570 aa20■□□□□ 0.79
SLC6A8-201ENST00000253122 DDX11L8A8MPP1 907 aa19.99■□□□□ 0.79
SLC6A8-201ENST00000253122 RRAGDQ9NQL2 400 aaPredicted RBP19.99■□□□□ 0.79
SLC6A8-201ENST00000253122 PER1O15534 1290 aaPredicted RBP19.99■□□□□ 0.79
SLC6A8-201ENST00000253122 PARD3Q8TEW0 1356 aa19.99■□□□□ 0.79
SLC6A8-201ENST00000253122 MRE11P49959 708 aa19.98■□□□□ 0.79
SLC6A8-201ENST00000253122 TBC1D2Q9BYX2 928 aa19.98■□□□□ 0.79
SLC6A8-201ENST00000253122 PDE3AQ14432 1141 aa19.98■□□□□ 0.79
SLC6A8-201ENST00000253122 KDM2BQ8NHM5 1336 aa19.98■□□□□ 0.79
SLC6A8-201ENST00000253122 UNC13BO14795 1591 aa19.97■□□□□ 0.79
SLC6A8-201ENST00000253122 NEO1Q92859 1461 aa19.97■□□□□ 0.79
SLC6A8-201ENST00000253122 POGZQ7Z3K3 1410 aa19.97■□□□□ 0.79
SLC6A8-201ENST00000253122 DISP3Q9P2K9 1392 aa19.97■□□□□ 0.79
SLC6A8-201ENST00000253122 PTMAP06454 111 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms