RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 AFAP1Q8N556 730 aa18.95■□□□□ 0.62
HOXC12-201ENST00000243103 LRPPRCP42704 1394 aaKnown RBP18.94■□□□□ 0.62
HOXC12-201ENST00000243103 SPINK5Q9NQ38 1064 aaPredicted RBP18.94■□□□□ 0.62
HOXC12-201ENST00000243103 ANKRD30AQ9BXX3 1397 aa18.93■□□□□ 0.62
HOXC12-201ENST00000243103 NASPP49321 788 aaPredicted RBP18.93■□□□□ 0.62
HOXC12-201ENST00000243103 EFCAB5A4FU69 1503 aa18.93■□□□□ 0.62
HOXC12-201ENST00000243103 SUPT6HQ7KZ85 1726 aaKnown RBP18.93■□□□□ 0.62
HOXC12-201ENST00000243103 DDX49Q9Y6V7 483 aaKnown RBP18.92■□□□□ 0.62
HOXC12-201ENST00000243103 RPRD2Q5VT52 1461 aaKnown RBP18.92■□□□□ 0.62
HOXC12-201ENST00000243103 USP19O94966 1318 aa18.92■□□□□ 0.62
HOXC12-201ENST00000243103 CFAP43Q8NDM7 1665 aa18.92■□□□□ 0.62
HOXC12-201ENST00000243103 SPDYE4A6NLX3 237 aa18.9■□□□□ 0.62
HOXC12-201ENST00000243103 CHMP5Q9NZZ3 219 aa18.9■□□□□ 0.62
HOXC12-201ENST00000243103 ARHGEF11O15085 1522 aa18.9■□□□□ 0.62
HOXC12-201ENST00000243103 TPM2P07951 284 aa18.89■□□□□ 0.62
HOXC12-201ENST00000243103 C22orf23Q9BZE7 217 aa18.89■□□□□ 0.61
HOXC12-201ENST00000243103 CHAMP1Q96JM3 812 aa18.89■□□□□ 0.61
HOXC12-201ENST00000243103 PDZRN3Q9UPQ7 1066 aa18.89■□□□□ 0.61
HOXC12-201ENST00000243103 ZBTB22O15209 634 aa18.88■□□□□ 0.61
HOXC12-201ENST00000243103 EHBP1L1Q8N3D4 1523 aa18.88■□□□□ 0.61
HOXC12-201ENST00000243103 RIPK4P57078 832 aa18.88■□□□□ 0.61
HOXC12-201ENST00000243103 PRDM4Q9UKN5 801 aa18.87■□□□□ 0.61
HOXC12-201ENST00000243103 UGGT2Q9NYU1 1516 aa18.87■□□□□ 0.61
HOXC12-201ENST00000243103 TMEM132EQ6IEE7 984 aa18.87■□□□□ 0.61
HOXC12-201ENST00000243103 STK26Q9P289 416 aa18.87■□□□□ 0.61
HOXC12-201ENST00000243103 TRAK1Q9UPV9 953 aa18.87■□□□□ 0.61
HOXC12-201ENST00000243103 CAVIN1Q6NZI2 390 aaKnown RBP18.86■□□□□ 0.61
HOXC12-201ENST00000243103 TEX14Q8IWB6 1497 aa18.86■□□□□ 0.61
HOXC12-201ENST00000243103 DUSP27Q5VZP5 1158 aa18.85■□□□□ 0.61
HOXC12-201ENST00000243103 DMRT2Q9Y5R5 561 aa18.85■□□□□ 0.61
HOXC12-201ENST00000243103 GGT6Q6P531 493 aa18.85■□□□□ 0.61
HOXC12-201ENST00000243103 ANTXR1Q9H6X2 564 aa18.85■□□□□ 0.61
HOXC12-201ENST00000243103 LRRIQ1Q96JM4 1722 aa18.85■□□□□ 0.61
HOXC12-201ENST00000243103 TMF1P82094 1093 aa18.84■□□□□ 0.61
HOXC12-201ENST00000243103 TNPO1Q92973 898 aaKnown RBP18.84■□□□□ 0.61
HOXC12-201ENST00000243103 MIA2Q96PC5 1412 aa18.84■□□□□ 0.61
HOXC12-201ENST00000243103 DISP3Q9P2K9 1392 aa18.84■□□□□ 0.61
HOXC12-201ENST00000243103 FSD2A1L4K1 749 aa18.84■□□□□ 0.61
HOXC12-201ENST00000243103 E9PSI1 815 aa18.84■□□□□ 0.61
HOXC12-201ENST00000243103 CHMP4AQ9BY43 222 aa18.84■□□□□ 0.61
HOXC12-201ENST00000243103 BCORL1Q5H9F3 1711 aa18.83■□□□□ 0.61
HOXC12-201ENST00000243103 KIF3BO15066 747 aa18.82■□□□□ 0.6
HOXC12-201ENST00000243103 CALD1Q05682 793 aaKnown RBP18.82■□□□□ 0.6
HOXC12-201ENST00000243103 CFAP70Q5T0N1 1121 aa18.82■□□□□ 0.6
HOXC12-201ENST00000243103 RBM42Q9BTD8 480 aaKnown RBP18.82■□□□□ 0.6
HOXC12-201ENST00000243103 ZNF830Q96NB3 372 aaPredicted RBP18.82■□□□□ 0.6
HOXC12-201ENST00000243103 MCTP1Q6DN14 999 aa18.81■□□□□ 0.6
HOXC12-201ENST00000243103 NOL8Q76FK4 1167 aaKnown RBP18.81■□□□□ 0.6
HOXC12-201ENST00000243103 KIAA1107Q9UPP5 1409 aa18.81■□□□□ 0.6
HOXC12-201ENST00000243103 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
HOXC12-201ENST00000243103 TRERF1Q96PN7 1200 aa18.81■□□□□ 0.6
HOXC12-201ENST00000243103 NUP153P49790 1475 aaKnown RBP18.81■□□□□ 0.6
HOXC12-201ENST00000243103 ZSCAN30Q86W11 494 aa18.8■□□□□ 0.6
HOXC12-201ENST00000243103 CAMSAP2Q08AD1 1489 aa18.8■□□□□ 0.6
HOXC12-201ENST00000243103 SSFA2P28290 1259 aa18.79■□□□□ 0.6
HOXC12-201ENST00000243103 C17orf53Q8N3J3 647 aaPredicted RBP18.79■□□□□ 0.6
HOXC12-201ENST00000243103 RBM27Q9P2N5 1060 aaKnown RBP18.79■□□□□ 0.6
HOXC12-201ENST00000243103 PCDHB15Q9Y5E8 787 aa18.79■□□□□ 0.6
HOXC12-201ENST00000243103 CDK11BP21127 795 aaKnown RBP18.79■□□□□ 0.6
HOXC12-201ENST00000243103 CCDC144AA2RUR9 1427 aa18.79■□□□□ 0.6
HOXC12-201ENST00000243103 DDX11L8A8MPP1 907 aa18.79■□□□□ 0.6
HOXC12-201ENST00000243103 FBLN1P23142 703 aa18.78■□□□□ 0.6
HOXC12-201ENST00000243103 FTSJ3Q8IY81 847 aaKnown RBP18.78■□□□□ 0.6
HOXC12-201ENST00000243103 PLEKHH1Q9ULM0 1364 aa18.78■□□□□ 0.6
HOXC12-201ENST00000243103 IQGAP2Q13576 1575 aa18.78■□□□□ 0.6
HOXC12-201ENST00000243103 APBB1O00213 710 aa18.77■□□□□ 0.6
HOXC12-201ENST00000243103 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.77■□□□□ 0.6
HOXC12-201ENST00000243103 TBC1D32Q96NH3 1257 aa18.77■□□□□ 0.6
HOXC12-201ENST00000243103 CGNQ9P2M7 1197 aaKnown RBP18.77■□□□□ 0.6
HOXC12-201ENST00000243103 U2SURPO15042 1029 aaKnown RBP18.77■□□□□ 0.6
HOXC12-201ENST00000243103 PER1O15534 1290 aaPredicted RBP18.77■□□□□ 0.6
HOXC12-201ENST00000243103 GBP4Q96PP9 640 aa18.77■□□□□ 0.6
HOXC12-201ENST00000243103 PZPP20742 1482 aa18.76■□□□□ 0.59
HOXC12-201ENST00000243103 CTTNBP2Q8WZ74 1663 aa18.76■□□□□ 0.59
HOXC12-201ENST00000243103 LNPKQ9C0E8 428 aa18.76■□□□□ 0.59
HOXC12-201ENST00000243103 C9orf84Q5VXU9 1444 aa18.76■□□□□ 0.59
HOXC12-201ENST00000243103 GOLGA6L22H0YM25 854 aa18.75■□□□□ 0.59
HOXC12-201ENST00000243103 CENPJQ9HC77 1338 aaPredicted RBP18.75■□□□□ 0.59
HOXC12-201ENST00000243103 SOX12O15370 315 aa18.75■□□□□ 0.59
HOXC12-201ENST00000243103 NAP1L2Q9ULW6 460 aaPredicted RBP18.74■□□□□ 0.59
HOXC12-201ENST00000243103 RLBP1P12271 317 aa18.74■□□□□ 0.59
HOXC12-201ENST00000243103 PAXIP1Q6ZW49 1069 aaPredicted RBP18.74■□□□□ 0.59
HOXC12-201ENST00000243103 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
HOXC12-201ENST00000243103 ELL2O00472 640 aaPredicted RBP18.73■□□□□ 0.59
HOXC12-201ENST00000243103 GPATCH8Q9UKJ3 1502 aaKnown RBP18.72■□□□□ 0.59
HOXC12-201ENST00000243103 MAPK8IP3Q9UPT6 1336 aa18.72■□□□□ 0.59
HOXC12-201ENST00000243103 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
HOXC12-201ENST00000243103 ITPRIPQ8IWB1 547 aa18.71■□□□□ 0.59
HOXC12-201ENST00000243103 SLC12A5Q9H2X9 1139 aa18.71■□□□□ 0.59
HOXC12-201ENST00000243103 TROQ12816 1431 aaPredicted RBP18.71■□□□□ 0.59
HOXC12-201ENST00000243103 OFD1O75665 1012 aa18.71■□□□□ 0.58
HOXC12-201ENST00000243103 ZNF771Q7L3S4 317 aaPredicted RBP18.71■□□□□ 0.58
HOXC12-201ENST00000243103 CERS3Q8IU89 383 aa18.7■□□□□ 0.58
HOXC12-201ENST00000243103 HECW1Q76N89 1606 aa18.7■□□□□ 0.58
HOXC12-201ENST00000243103 PARD3Q8TEW0 1356 aa18.7■□□□□ 0.58
HOXC12-201ENST00000243103 PTPRGP23470 1445 aa18.7■□□□□ 0.58
HOXC12-201ENST00000243103 PRPF40AO75400 957 aaKnown RBP18.69■□□□□ 0.58
HOXC12-201ENST00000243103 SLFN5Q08AF3 891 aa18.69■□□□□ 0.58
HOXC12-201ENST00000243103 CUL7Q14999 1698 aa18.69■□□□□ 0.58
HOXC12-201ENST00000243103 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms