RNA–Protein interactions for RNA: ENST00000232496.4

TUSC2-201, Transcript of tumor suppressor 2, mitochondrial calcium regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUSC2, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC2-201ENST00000232496 NEUROD1Q13562 356 aa29.8■■■□□ 2.36
TUSC2-201ENST00000232496 RGL3Q3MIN7 710 aa29.8■■■□□ 2.36
TUSC2-201ENST00000232496 ZNF326Q5BKZ1 582 aaKnown RBP29.8■■■□□ 2.36
TUSC2-201ENST00000232496 RIMS2Q9UQ26 1411 aa29.78■■■□□ 2.36
TUSC2-201ENST00000232496 RPGRIP1LQ68CZ1 1315 aa29.78■■■□□ 2.36
TUSC2-201ENST00000232496 LTKP29376 864 aa29.75■■■□□ 2.35
TUSC2-201ENST00000232496 SCAF11Q99590 1463 aaKnown RBP29.74■■■□□ 2.35
TUSC2-201ENST00000232496 ANKLE2Q86XL3 938 aa29.74■■■□□ 2.35
TUSC2-201ENST00000232496 HDGFP51858 240 aaKnown RBP29.73■■■□□ 2.35
TUSC2-201ENST00000232496 TXNDC2Q86VQ3 553 aa29.73■■■□□ 2.35
TUSC2-201ENST00000232496 EID1Q9Y6B2 187 aa29.72■■■□□ 2.35
TUSC2-201ENST00000232496 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.72■■■□□ 2.35
TUSC2-201ENST00000232496 MED14O60244 1454 aa29.69■■■□□ 2.34
TUSC2-201ENST00000232496 NCKAP5LQ9HCH0 1330 aa29.68■■■□□ 2.34
TUSC2-201ENST00000232496 NUTM2DQ5VT03 806 aaPredicted RBP29.68■■■□□ 2.34
TUSC2-201ENST00000232496 VGFO15240 615 aaPredicted RBP29.67■■■□□ 2.34
TUSC2-201ENST00000232496 L3MBTL2Q969R5 705 aa29.67■■■□□ 2.34
TUSC2-201ENST00000232496 MYOM2P54296 1465 aa29.66■■■□□ 2.34
TUSC2-201ENST00000232496 IQGAP1P46940 1657 aa29.66■■■□□ 2.34
TUSC2-201ENST00000232496 DCAF11Q8TEB1 546 aa29.66■■■□□ 2.34
TUSC2-201ENST00000232496 STAC3Q96MF2 364 aa29.65■■■□□ 2.34
TUSC2-201ENST00000232496 TONSLQ96HA7 1378 aa29.65■■■□□ 2.34
TUSC2-201ENST00000232496 PPP1R15AO75807 674 aaPredicted RBP29.64■■■□□ 2.34
TUSC2-201ENST00000232496 PLEKHG1Q9ULL1 1385 aa29.63■■■□□ 2.33
TUSC2-201ENST00000232496 NRXN1Q9ULB1 1477 aa29.62■■■□□ 2.33
TUSC2-201ENST00000232496 NRXN3Q9Y4C0 1643 aa29.62■■■□□ 2.33
TUSC2-201ENST00000232496 TIMELESSQ9UNS1 1208 aa29.61■■■□□ 2.33
TUSC2-201ENST00000232496 SETBP1Q9Y6X0 1596 aa29.61■■■□□ 2.33
TUSC2-201ENST00000232496 ADGRF5Q8IZF2 1346 aa29.61■■■□□ 2.33
TUSC2-201ENST00000232496 NPHP4O75161 1426 aaPredicted RBP29.61■■■□□ 2.33
TUSC2-201ENST00000232496 KDM2AQ9Y2K7 1162 aa29.59■■■□□ 2.33
TUSC2-201ENST00000232496 PIK3C2GO75747 1445 aa29.57■■■□□ 2.32
TUSC2-201ENST00000232496 SETD1AO15047 1707 aaKnown RBP29.55■■■□□ 2.32
TUSC2-201ENST00000232496 DMRT2Q9Y5R5 561 aa29.53■■■□□ 2.32
TUSC2-201ENST00000232496 ADAMTS13Q76LX8 1427 aa29.53■■■□□ 2.32
TUSC2-201ENST00000232496 DIP2AQ14689 1571 aa29.52■■■□□ 2.32
TUSC2-201ENST00000232496 ALKQ9UM73 1620 aa29.52■■■□□ 2.32
TUSC2-201ENST00000232496 SENP3Q9H4L4 574 aaPredicted RBP29.51■■■□□ 2.31
TUSC2-201ENST00000232496 PRAG1Q86YV5 1406 aa29.51■■■□□ 2.31
TUSC2-201ENST00000232496 LAMC1P11047 1609 aa29.51■■■□□ 2.31
TUSC2-201ENST00000232496 KIAA1210Q9ULL0 1709 aa29.5■■■□□ 2.31
TUSC2-201ENST00000232496 BCANQ96GW7 911 aa29.5■■■□□ 2.31
TUSC2-201ENST00000232496 SLC26A8Q96RN1 970 aa29.47■■■□□ 2.31
TUSC2-201ENST00000232496 TBX22Q9Y458 520 aa29.47■■■□□ 2.31
TUSC2-201ENST00000232496 C14orf93Q9H972 538 aaKnown RBP29.46■■■□□ 2.31
TUSC2-201ENST00000232496 ZEB1P37275 1124 aaPredicted RBP29.45■■■□□ 2.31
TUSC2-201ENST00000232496 CHD2O14647 1828 aaKnown RBP29.45■■■□□ 2.3
TUSC2-201ENST00000232496 TRPM1Q7Z4N2 1603 aa29.44■■■□□ 2.3
TUSC2-201ENST00000232496 NBPF8Q3BBV2 869 aa29.42■■■□□ 2.3
TUSC2-201ENST00000232496 CFAP70Q5T0N1 1121 aa29.42■■■□□ 2.3
TUSC2-201ENST00000232496 METP08581 1390 aa29.39■■■□□ 2.3
TUSC2-201ENST00000232496 PIK3R4Q99570 1358 aa29.38■■■□□ 2.29
TUSC2-201ENST00000232496 ASXL1Q8IXJ9 1541 aa29.38■■■□□ 2.29
TUSC2-201ENST00000232496 STRCP1A6NGW2 1772 aa29.37■■■□□ 2.29
TUSC2-201ENST00000232496 ADGRB1O14514 1584 aa29.36■■■□□ 2.29
TUSC2-201ENST00000232496 NWD1Q149M9 1564 aa29.33■■■□□ 2.29
TUSC2-201ENST00000232496 XRN1Q8IZH2 1706 aaKnown RBP29.32■■■□□ 2.28
TUSC2-201ENST00000232496 TMEM132EQ6IEE7 984 aa29.32■■■□□ 2.28
TUSC2-201ENST00000232496 PTPRUQ92729 1446 aa29.32■■■□□ 2.28
TUSC2-201ENST00000232496 RALGAPBQ86X10 1494 aa29.32■■■□□ 2.28
TUSC2-201ENST00000232496 NBPF1Q3BBV0 1214 aa29.31■■■□□ 2.28
TUSC2-201ENST00000232496 KNDC1Q76NI1 1749 aa29.3■■■□□ 2.28
TUSC2-201ENST00000232496 KCNA6P17658 529 aa29.28■■■□□ 2.28
TUSC2-201ENST00000232496 ZNF335Q9H4Z2 1342 aaPredicted RBP29.28■■■□□ 2.28
TUSC2-201ENST00000232496 YTHDC2Q9H6S0 1430 aaKnown RBP29.27■■■□□ 2.28
TUSC2-201ENST00000232496 LRPPRCP42704 1394 aaKnown RBP29.26■■■□□ 2.27
TUSC2-201ENST00000232496 GPRASP1Q5JY77 1395 aa29.26■■■□□ 2.27
TUSC2-201ENST00000232496 AMOTL2Q9Y2J4 779 aa29.25■■■□□ 2.27
TUSC2-201ENST00000232496 ROCK2O75116 1388 aaKnown RBP29.25■■■□□ 2.27
TUSC2-201ENST00000232496 TECPR2O15040 1411 aa29.23■■■□□ 2.27
TUSC2-201ENST00000232496 LTBP4Q8N2S1 1624 aa29.23■■■□□ 2.27
TUSC2-201ENST00000232496 ABCC11Q96J66 1382 aa29.23■■■□□ 2.27
TUSC2-201ENST00000232496 NKTRP30414 1462 aaKnown RBP29.23■■■□□ 2.27
TUSC2-201ENST00000232496 CPS1P31327 1500 aa29.21■■■□□ 2.27
TUSC2-201ENST00000232496 ARHGEF28Q8N1W1 1705 aaKnown RBP29.21■■■□□ 2.27
TUSC2-201ENST00000232496 STK26Q9P289 416 aa29.2■■■□□ 2.26
TUSC2-201ENST00000232496 DLC1Q96QB1 1528 aa29.19■■■□□ 2.26
TUSC2-201ENST00000232496 PTCH1Q13635 1447 aa29.18■■■□□ 2.26
TUSC2-201ENST00000232496 XIRP1Q702N8 1843 aaKnown RBP29.18■■■□□ 2.26
TUSC2-201ENST00000232496 ROBO2Q9HCK4 1378 aa29.16■■■□□ 2.26
TUSC2-201ENST00000232496 CARD11Q9BXL7 1154 aa29.15■■■□□ 2.26
TUSC2-201ENST00000232496 SIRT1Q96EB6 747 aa29.15■■■□□ 2.26
TUSC2-201ENST00000232496 TRAK1Q9UPV9 953 aa29.15■■■□□ 2.26
TUSC2-201ENST00000232496 FAM135BQ49AJ0 1406 aa29.13■■■□□ 2.25
TUSC2-201ENST00000232496 LRRC7Q96NW7 1537 aa29.13■■■□□ 2.25
TUSC2-201ENST00000232496 PROSER2Q86WR7 435 aaPredicted RBP29.1■■■□□ 2.25
TUSC2-201ENST00000232496 WAPLQ7Z5K2 1190 aa29.07■■■□□ 2.24
TUSC2-201ENST00000232496 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.07■■■□□ 2.24
TUSC2-201ENST00000232496 PRAM1Q96QH2 718 aa29.06■■■□□ 2.24
TUSC2-201ENST00000232496 NCOA3Q9Y6Q9 1424 aa29.06■■■□□ 2.24
TUSC2-201ENST00000232496 TMEM94Q12767 1356 aa29.06■■■□□ 2.24
TUSC2-201ENST00000232496 PLEKHH1Q9ULM0 1364 aa29.06■■■□□ 2.24
TUSC2-201ENST00000232496 NALCNQ8IZF0 1738 aa29.05■■■□□ 2.24
TUSC2-201ENST00000232496 QRICH2Q9H0J4 1663 aa29.05■■■□□ 2.24
TUSC2-201ENST00000232496 RBM33Q96EV2 1170 aaKnown RBP29.04■■■□□ 2.24
TUSC2-201ENST00000232496 EIF3AQ14152 1382 aaKnown RBP29.03■■■□□ 2.24
TUSC2-201ENST00000232496 USP47Q96K76 1375 aa29.02■■■□□ 2.24
TUSC2-201ENST00000232496 POGKQ9P215 609 aa29.02■■■□□ 2.24
TUSC2-201ENST00000232496 CENPJQ9HC77 1338 aaPredicted RBP28.99■■■□□ 2.23
TUSC2-201ENST00000232496 ADGRL3Q9HAR2 1447 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms