RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ADGRF5Q8IZF2 1346 aa19.33■□□□□ 0.68
UBE2D4-201ENST00000222402 E9PSI1 815 aa19.32■□□□□ 0.68
UBE2D4-201ENST00000222402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.32■□□□□ 0.68
UBE2D4-201ENST00000222402 MAPK8IP3Q9UPT6 1336 aa19.32■□□□□ 0.68
UBE2D4-201ENST00000222402 MS4A1P11836 297 aa19.32■□□□□ 0.68
UBE2D4-201ENST00000222402 SKAP1Q86WV1 359 aa19.31■□□□□ 0.68
UBE2D4-201ENST00000222402 FTSJ3Q8IY81 847 aaKnown RBP19.31■□□□□ 0.68
UBE2D4-201ENST00000222402 CENPQQ7L2Z9 268 aaPredicted RBP19.31■□□□□ 0.68
UBE2D4-201ENST00000222402 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
UBE2D4-201ENST00000222402 SLC12A5Q9H2X9 1139 aa19.31■□□□□ 0.68
UBE2D4-201ENST00000222402 C20orf194Q5TEA3 1177 aa19.3■□□□□ 0.68
UBE2D4-201ENST00000222402 COL17A1Q9UMD9 1497 aaPredicted RBP19.3■□□□□ 0.68
UBE2D4-201ENST00000222402 CROCC2H7BZ55 1655 aa19.3■□□□□ 0.68
UBE2D4-201ENST00000222402 FANCAO15360 1455 aa19.29■□□□□ 0.68
UBE2D4-201ENST00000222402 RNF123Q5XPI4 1314 aa19.29■□□□□ 0.68
UBE2D4-201ENST00000222402 ADGRL1O94910 1474 aa19.29■□□□□ 0.68
UBE2D4-201ENST00000222402 GPRASP1Q5JY77 1395 aa19.29■□□□□ 0.68
UBE2D4-201ENST00000222402 CLUAP1Q96AJ1 413 aa19.29■□□□□ 0.68
UBE2D4-201ENST00000222402 BCL2L13Q9BXK5 485 aa19.29■□□□□ 0.68
UBE2D4-201ENST00000222402 SCAF11Q99590 1463 aaKnown RBP19.28■□□□□ 0.68
UBE2D4-201ENST00000222402 TTC37Q6PGP7 1564 aa19.28■□□□□ 0.68
UBE2D4-201ENST00000222402 VGFO15240 615 aaPredicted RBP19.28■□□□□ 0.68
UBE2D4-201ENST00000222402 AMER1Q5JTC6 1135 aaPredicted RBP19.28■□□□□ 0.68
UBE2D4-201ENST00000222402 PLA2R1Q13018 1463 aa19.28■□□□□ 0.68
UBE2D4-201ENST00000222402 MLECQ14165 292 aa19.27■□□□□ 0.68
UBE2D4-201ENST00000222402 KDM5DQ9BY66 1539 aa19.27■□□□□ 0.68
UBE2D4-201ENST00000222402 CGNL1Q0VF96 1302 aa19.27■□□□□ 0.68
UBE2D4-201ENST00000222402 COG6Q9Y2V7 657 aa19.26■□□□□ 0.67
UBE2D4-201ENST00000222402 PREX2Q70Z35 1606 aa19.26■□□□□ 0.67
UBE2D4-201ENST00000222402 EVC2Q86UK5 1308 aa19.25■□□□□ 0.67
UBE2D4-201ENST00000222402 BCAR3O75815 825 aa19.25■□□□□ 0.67
UBE2D4-201ENST00000222402 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
UBE2D4-201ENST00000222402 BACH2Q9BYV9 841 aa19.24■□□□□ 0.67
UBE2D4-201ENST00000222402 RAPGEF3O95398 923 aa19.24■□□□□ 0.67
UBE2D4-201ENST00000222402 SLC4A3P48751 1232 aa19.24■□□□□ 0.67
UBE2D4-201ENST00000222402 MTHFSP49914 203 aa19.23■□□□□ 0.67
UBE2D4-201ENST00000222402 DUSP27Q5VZP5 1158 aa19.23■□□□□ 0.67
UBE2D4-201ENST00000222402 CABP2Q9NPB3 220 aa19.22■□□□□ 0.67
UBE2D4-201ENST00000222402 ERCC6L2Q5T890 1561 aa19.22■□□□□ 0.67
UBE2D4-201ENST00000222402 EIF2AK4Q9P2K8 1649 aaKnown RBP19.22■□□□□ 0.67
UBE2D4-201ENST00000222402 SLFN5Q08AF3 891 aa19.22■□□□□ 0.67
UBE2D4-201ENST00000222402 MINK1Q8N4C8 1332 aaPredicted RBP19.21■□□□□ 0.67
UBE2D4-201ENST00000222402 MYH16Q9H6N6 1097 aa19.21■□□□□ 0.67
UBE2D4-201ENST00000222402 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
UBE2D4-201ENST00000222402 TCP11L2Q8N4U5 519 aa19.2■□□□□ 0.66
UBE2D4-201ENST00000222402 RUNDC1Q96C34 613 aa19.2■□□□□ 0.66
UBE2D4-201ENST00000222402 MAST1Q9Y2H9 1570 aa19.2■□□□□ 0.66
UBE2D4-201ENST00000222402 PANK1Q8TE04 598 aa19.2■□□□□ 0.66
UBE2D4-201ENST00000222402 MYO5CQ9NQX4 1742 aa19.19■□□□□ 0.66
UBE2D4-201ENST00000222402 CHD1O14646 1710 aa19.19■□□□□ 0.66
UBE2D4-201ENST00000222402 HDGFL2Q7Z4V5 671 aaPredicted RBP19.19■□□□□ 0.66
UBE2D4-201ENST00000222402 NGEFQ8N5V2 710 aa19.19■□□□□ 0.66
UBE2D4-201ENST00000222402 CDC42BPBQ9Y5S2 1711 aa19.18■□□□□ 0.66
UBE2D4-201ENST00000222402 TERF2IPQ9NYB0 399 aa19.18■□□□□ 0.66
UBE2D4-201ENST00000222402 BECN1Q14457 450 aa19.17■□□□□ 0.66
UBE2D4-201ENST00000222402 WDR7Q9Y4E6 1490 aa19.16■□□□□ 0.66
UBE2D4-201ENST00000222402 PLEKHH1Q9ULM0 1364 aa19.16■□□□□ 0.66
UBE2D4-201ENST00000222402 GGNBP2Q9H3C7 697 aa19.16■□□□□ 0.66
UBE2D4-201ENST00000222402 NOS1P29475 1434 aa19.16■□□□□ 0.66
UBE2D4-201ENST00000222402 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
UBE2D4-201ENST00000222402 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
UBE2D4-201ENST00000222402 NSD3Q9BZ95 1437 aa19.15■□□□□ 0.66
UBE2D4-201ENST00000222402 SMC4Q9NTJ3 1288 aa19.15■□□□□ 0.66
UBE2D4-201ENST00000222402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.14■□□□□ 0.65
UBE2D4-201ENST00000222402 CD109Q6YHK3 1445 aa19.13■□□□□ 0.65
UBE2D4-201ENST00000222402 ASXL1Q8IXJ9 1541 aa19.13■□□□□ 0.65
UBE2D4-201ENST00000222402 ASXL2Q76L83 1435 aa19.13■□□□□ 0.65
UBE2D4-201ENST00000222402 WWC1Q8IX03 1113 aa19.12■□□□□ 0.65
UBE2D4-201ENST00000222402 PMFBP1Q8TBY8 1022 aa19.12■□□□□ 0.65
UBE2D4-201ENST00000222402 CARD14Q9BXL6 1004 aa19.12■□□□□ 0.65
UBE2D4-201ENST00000222402 POLR1AO95602 1720 aaPredicted RBP19.12■□□□□ 0.65
UBE2D4-201ENST00000222402 ITPRIPQ8IWB1 547 aa19.11■□□□□ 0.65
UBE2D4-201ENST00000222402 RWDD1Q9H446 243 aaPredicted RBP19.11■□□□□ 0.65
UBE2D4-201ENST00000222402 MAGI2Q86UL8 1455 aa19.1■□□□□ 0.65
UBE2D4-201ENST00000222402 PNNQ9H307 717 aaKnown RBP19.1■□□□□ 0.65
UBE2D4-201ENST00000222402 ATP10AO60312 1499 aa19.1■□□□□ 0.65
UBE2D4-201ENST00000222402 TRPM1Q7Z4N2 1603 aa19.09■□□□□ 0.65
UBE2D4-201ENST00000222402 PRDM15P57071 1507 aaPredicted RBP19.08■□□□□ 0.65
UBE2D4-201ENST00000222402 C14orf93Q9H972 538 aaKnown RBP19.08■□□□□ 0.64
UBE2D4-201ENST00000222402 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.64
UBE2D4-201ENST00000222402 ABCC1P33527 1531 aa19.08■□□□□ 0.64
UBE2D4-201ENST00000222402 ATP7AQ04656 1500 aa19.07■□□□□ 0.64
UBE2D4-201ENST00000222402 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
UBE2D4-201ENST00000222402 RPGRIP1LQ68CZ1 1315 aa19.07■□□□□ 0.64
UBE2D4-201ENST00000222402 ARXQ96QS3 562 aa19.07■□□□□ 0.64
UBE2D4-201ENST00000222402 PDE3AQ14432 1141 aa19.06■□□□□ 0.64
UBE2D4-201ENST00000222402 UNC13BO14795 1591 aa19.06■□□□□ 0.64
UBE2D4-201ENST00000222402 IQGAP3Q86VI3 1631 aa19.06■□□□□ 0.64
UBE2D4-201ENST00000222402 ZKSCAN2Q63HK3 967 aa19.06■□□□□ 0.64
UBE2D4-201ENST00000222402 PRAM1Q96QH2 718 aa19.06■□□□□ 0.64
UBE2D4-201ENST00000222402 NKTRP30414 1462 aaKnown RBP19.05■□□□□ 0.64
UBE2D4-201ENST00000222402 SLKQ9H2G2 1235 aaPredicted RBP19.05■□□□□ 0.64
UBE2D4-201ENST00000222402 PLXNC1O60486 1568 aa19.05■□□□□ 0.64
UBE2D4-201ENST00000222402 ZCCHC11Q5TAX3 1644 aaKnown RBP19.05■□□□□ 0.64
UBE2D4-201ENST00000222402 HSP90AA1P07900 732 aaKnown RBP19.04■□□□□ 0.64
UBE2D4-201ENST00000222402 PIK3C2GO75747 1445 aa19.04■□□□□ 0.64
UBE2D4-201ENST00000222402 IDI1Q13907 227 aa19.04■□□□□ 0.64
UBE2D4-201ENST00000222402 SOX12O15370 315 aa19.03■□□□□ 0.64
UBE2D4-201ENST00000222402 TSR2Q969E8 191 aaKnown RBP19.03■□□□□ 0.64
UBE2D4-201ENST00000222402 DIAPH1O60610 1272 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms