RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 KANK1Q14678 1352 aa22.88■■□□□ 1.25
USB1-201ENST00000219281 INSRP06213 1382 aa22.88■■□□□ 1.25
USB1-201ENST00000219281 TRPM2O94759 1503 aa22.88■■□□□ 1.25
USB1-201ENST00000219281 MROH1Q8NDA8 1641 aa22.87■■□□□ 1.25
USB1-201ENST00000219281 TET3O43151 1660 aa22.86■■□□□ 1.25
USB1-201ENST00000219281 NPM2Q86SE8 214 aaKnown RBP22.85■■□□□ 1.25
USB1-201ENST00000219281 PDE4AP27815 886 aa22.84■■□□□ 1.25
USB1-201ENST00000219281 ZMYM4Q5VZL5 1548 aa22.84■■□□□ 1.25
USB1-201ENST00000219281 POGZQ7Z3K3 1410 aa22.84■■□□□ 1.25
USB1-201ENST00000219281 SPHKAPQ2M3C7 1700 aa22.82■■□□□ 1.24
USB1-201ENST00000219281 CLTCL1P53675 1640 aa22.82■■□□□ 1.24
USB1-201ENST00000219281 ADAMTS8Q9UP79 889 aa22.82■■□□□ 1.24
USB1-201ENST00000219281 CRBNQ96SW2 442 aa22.82■■□□□ 1.24
USB1-201ENST00000219281 MLH3Q9UHC1 1453 aa22.8■■□□□ 1.24
USB1-201ENST00000219281 MS4A1P11836 297 aa22.79■■□□□ 1.24
USB1-201ENST00000219281 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
USB1-201ENST00000219281 BACH2Q9BYV9 841 aa22.79■■□□□ 1.24
USB1-201ENST00000219281 RNF17Q9BXT8 1623 aaKnown RBP22.79■■□□□ 1.24
USB1-201ENST00000219281 KNSTRNQ9Y448 316 aa22.79■■□□□ 1.24
USB1-201ENST00000219281 RAPGEF3O95398 923 aa22.78■■□□□ 1.24
USB1-201ENST00000219281 CFAP74Q9C0B2 1584 aa22.78■■□□□ 1.24
USB1-201ENST00000219281 PPP2R1AP30153 589 aa22.77■■□□□ 1.24
USB1-201ENST00000219281 CEP152O94986 1710 aa22.77■■□□□ 1.24
USB1-201ENST00000219281 STAC3Q96MF2 364 aa22.75■■□□□ 1.23
USB1-201ENST00000219281 FRMPD1Q5SYB0 1578 aa22.75■■□□□ 1.23
USB1-201ENST00000219281 MADDQ8WXG6 1647 aa22.74■■□□□ 1.23
USB1-201ENST00000219281 WDR43Q15061 677 aaKnown RBP eCLIP22.74■■□□□ 1.23
USB1-201ENST00000219281 UGGT1Q9NYU2 1555 aa22.74■■□□□ 1.23
USB1-201ENST00000219281 C20orf194Q5TEA3 1177 aa22.74■■□□□ 1.23
USB1-201ENST00000219281 NEO1Q92859 1461 aa22.74■■□□□ 1.23
USB1-201ENST00000219281 RTL5Q5HYW3 569 aaPredicted RBP22.73■■□□□ 1.23
USB1-201ENST00000219281 SKAP1Q86WV1 359 aa22.73■■□□□ 1.23
USB1-201ENST00000219281 EFCAB6Q5THR3 1501 aa22.73■■□□□ 1.23
USB1-201ENST00000219281 AMER1Q5JTC6 1135 aaPredicted RBP22.73■■□□□ 1.23
USB1-201ENST00000219281 GGT6Q6P531 493 aa22.73■■□□□ 1.23
USB1-201ENST00000219281 LMTK2Q8IWU2 1503 aa22.73■■□□□ 1.23
USB1-201ENST00000219281 PLEKHH1Q9ULM0 1364 aa22.72■■□□□ 1.23
USB1-201ENST00000219281 PPRC1Q5VV67 1664 aaKnown RBP22.71■■□□□ 1.23
USB1-201ENST00000219281 HECW2Q9P2P5 1572 aa22.71■■□□□ 1.23
USB1-201ENST00000219281 CDCA8Q53HL2 280 aa22.7■■□□□ 1.22
USB1-201ENST00000219281 IQGAP1P46940 1657 aa22.7■■□□□ 1.22
USB1-201ENST00000219281 SCAF11Q99590 1463 aaKnown RBP22.69■■□□□ 1.22
USB1-201ENST00000219281 DUSP27Q5VZP5 1158 aa22.69■■□□□ 1.22
USB1-201ENST00000219281 ABCA6Q8N139 1617 aa22.68■■□□□ 1.22
USB1-201ENST00000219281 NEURL4Q96JN8 1562 aa22.68■■□□□ 1.22
USB1-201ENST00000219281 NPATQ14207 1427 aa22.66■■□□□ 1.22
USB1-201ENST00000219281 ADGRF5Q8IZF2 1346 aa22.65■■□□□ 1.22
USB1-201ENST00000219281 ZNF521Q96K83 1311 aa22.65■■□□□ 1.22
USB1-201ENST00000219281 SYNMO15061 1565 aa22.65■■□□□ 1.22
USB1-201ENST00000219281 GOLGA2Q08379 1002 aa22.65■■□□□ 1.22
USB1-201ENST00000219281 ASXL1Q8IXJ9 1541 aa22.64■■□□□ 1.21
USB1-201ENST00000219281 MAP3K4Q9Y6R4 1608 aa22.63■■□□□ 1.21
USB1-201ENST00000219281 LAS1LQ9Y4W2 734 aaKnown RBP22.63■■□□□ 1.21
USB1-201ENST00000219281 CFAP70Q5T0N1 1121 aa22.62■■□□□ 1.21
USB1-201ENST00000219281 KDM2BQ8NHM5 1336 aa22.62■■□□□ 1.21
USB1-201ENST00000219281 RIMBP3CA6NJZ7 1639 aa22.61■■□□□ 1.21
USB1-201ENST00000219281 RIMBP3BA6NNM3 1639 aa22.61■■□□□ 1.21
USB1-201ENST00000219281 RIMBP3Q9UFD9 1639 aa22.61■■□□□ 1.21
USB1-201ENST00000219281 CCDC146Q8IYE0 955 aa22.61■■□□□ 1.21
USB1-201ENST00000219281 PIK3C2GO75747 1445 aa22.6■■□□□ 1.21
USB1-201ENST00000219281 EIF3AQ14152 1382 aaKnown RBP22.59■■□□□ 1.21
USB1-201ENST00000219281 MYOM2P54296 1465 aa22.59■■□□□ 1.21
USB1-201ENST00000219281 KIF1BO60333 1816 aa22.59■■□□□ 1.21
USB1-201ENST00000219281 SLFN5Q08AF3 891 aa22.59■■□□□ 1.21
USB1-201ENST00000219281 ABCC3O15438 1527 aa22.58■■□□□ 1.21
USB1-201ENST00000219281 DIP2CQ9Y2E4 1556 aa22.58■■□□□ 1.21
USB1-201ENST00000219281 CFAP65Q6ZU64 1925 aaKnown RBP22.58■■□□□ 1.21
USB1-201ENST00000219281 GLI2P10070 1586 aa22.58■■□□□ 1.21
USB1-201ENST00000219281 RICTORQ6R327 1708 aa22.58■■□□□ 1.21
USB1-201ENST00000219281 CENPQQ7L2Z9 268 aaPredicted RBP22.58■■□□□ 1.21
USB1-201ENST00000219281 YEATS2Q9ULM3 1422 aa22.58■■□□□ 1.2
USB1-201ENST00000219281 FAM69CQ0P6D2 419 aa22.57■■□□□ 1.2
USB1-201ENST00000219281 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.57■■□□□ 1.2
USB1-201ENST00000219281 MROH2AA6NES4 1674 aa22.57■■□□□ 1.2
USB1-201ENST00000219281 NPC1L1Q9UHC9 1359 aa22.57■■□□□ 1.2
USB1-201ENST00000219281 MYOM1P52179 1685 aa22.56■■□□□ 1.2
USB1-201ENST00000219281 CHGAP10645 457 aaKnown RBP22.56■■□□□ 1.2
USB1-201ENST00000219281 NEFMP07197 916 aa22.55■■□□□ 1.2
USB1-201ENST00000219281 KIAA1210Q9ULL0 1709 aa22.55■■□□□ 1.2
USB1-201ENST00000219281 NRXN1Q9ULB1 1477 aa22.55■■□□□ 1.2
USB1-201ENST00000219281 ADGRB3O60242 1522 aa22.54■■□□□ 1.2
USB1-201ENST00000219281 APAF1O14727 1248 aa22.54■■□□□ 1.2
USB1-201ENST00000219281 DDRGK1Q96HY6 314 aa22.54■■□□□ 1.2
USB1-201ENST00000219281 TRMT2AQ8IZ69 625 aaKnown RBP22.54■■□□□ 1.2
USB1-201ENST00000219281 SPINK5Q9NQ38 1064 aaPredicted RBP22.54■■□□□ 1.2
USB1-201ENST00000219281 IFT172Q9UG01 1749 aa22.53■■□□□ 1.2
USB1-201ENST00000219281 NOS1P29475 1434 aa22.53■■□□□ 1.2
USB1-201ENST00000219281 KDM5AP29375 1690 aaKnown RBP22.51■■□□□ 1.19
USB1-201ENST00000219281 PPM1GO15355 546 aaPredicted RBP22.5■■□□□ 1.19
USB1-201ENST00000219281 CARD14Q9BXL6 1004 aa22.49■■□□□ 1.19
USB1-201ENST00000219281 USP35Q9P2H5 1018 aa22.49■■□□□ 1.19
USB1-201ENST00000219281 SIGLEC1Q9BZZ2 1709 aa22.49■■□□□ 1.19
USB1-201ENST00000219281 ERVK-7P63135 1459 aa22.48■■□□□ 1.19
USB1-201ENST00000219281 CAMSAP1Q5T5Y3 1602 aa22.48■■□□□ 1.19
USB1-201ENST00000219281 DIP2BQ9P265 1576 aa22.48■■□□□ 1.19
USB1-201ENST00000219281 BCAR3O75815 825 aa22.47■■□□□ 1.19
USB1-201ENST00000219281 NKTRP30414 1462 aaKnown RBP22.47■■□□□ 1.19
USB1-201ENST00000219281 FAM161AQ3B820 660 aa22.47■■□□□ 1.19
USB1-201ENST00000219281 SLC24A1O60721 1099 aa22.46■■□□□ 1.19
USB1-201ENST00000219281 C8orf34Q49A92 452 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms