RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 MYO5CQ9NQX4 1742 aa12.51□□□□□ -0.41
TUBB1-201ENST00000217133 PLEKHH2Q8IVE3 1493 aa12.51□□□□□ -0.41
TUBB1-201ENST00000217133 RSPH6AQ9H0K4 717 aa12.51□□□□□ -0.41
TUBB1-201ENST00000217133 KNSTRNQ9Y448 316 aa12.51□□□□□ -0.41
TUBB1-201ENST00000217133 CCDC141Q6ZP82 1450 aa12.51□□□□□ -0.41
TUBB1-201ENST00000217133 ABCA9Q8IUA7 1624 aa12.51□□□□□ -0.41
TUBB1-201ENST00000217133 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
TUBB1-201ENST00000217133 FAM43AQ8N2R8 423 aa12.5□□□□□ -0.41
TUBB1-201ENST00000217133 RSPH4AQ5TD94 716 aa12.5□□□□□ -0.41
TUBB1-201ENST00000217133 BECN1Q14457 450 aa12.5□□□□□ -0.41
TUBB1-201ENST00000217133 TSPOAP1O95153 1857 aa12.49□□□□□ -0.41
TUBB1-201ENST00000217133 CCDC144AA2RUR9 1427 aa12.49□□□□□ -0.41
TUBB1-201ENST00000217133 INSRP06213 1382 aa12.49□□□□□ -0.41
TUBB1-201ENST00000217133 ADGBQ8N7X0 1667 aa12.49□□□□□ -0.41
TUBB1-201ENST00000217133 DISP3Q9P2K9 1392 aa12.48□□□□□ -0.41
TUBB1-201ENST00000217133 SLKQ9H2G2 1235 aaPredicted RBP12.48□□□□□ -0.41
TUBB1-201ENST00000217133 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
TUBB1-201ENST00000217133 KIF3BO15066 747 aa12.47□□□□□ -0.41
TUBB1-201ENST00000217133 ZMYM4Q5VZL5 1548 aa12.47□□□□□ -0.41
TUBB1-201ENST00000217133 PRAG1Q86YV5 1406 aa12.47□□□□□ -0.41
TUBB1-201ENST00000217133 ARXQ96QS3 562 aa12.47□□□□□ -0.41
TUBB1-201ENST00000217133 PLEKHH1Q9ULM0 1364 aa12.47□□□□□ -0.41
TUBB1-201ENST00000217133 TESK2Q96S53 571 aa12.46□□□□□ -0.41
TUBB1-201ENST00000217133 DIP2BQ9P265 1576 aa12.46□□□□□ -0.41
TUBB1-201ENST00000217133 ABCC1P33527 1531 aa12.46□□□□□ -0.41
TUBB1-201ENST00000217133 GGT6Q6P531 493 aa12.46□□□□□ -0.41
TUBB1-201ENST00000217133 ERBINQ96RT1 1412 aa12.46□□□□□ -0.42
TUBB1-201ENST00000217133 PPP2R1AP30153 589 aa12.46□□□□□ -0.42
TUBB1-201ENST00000217133 CCDC146Q8IYE0 955 aa12.46□□□□□ -0.42
TUBB1-201ENST00000217133 POGKQ9P215 609 aa12.46□□□□□ -0.42
TUBB1-201ENST00000217133 E9PCH4 1651 aa12.45□□□□□ -0.42
TUBB1-201ENST00000217133 UPF2Q9HAU5 1272 aaKnown RBP12.45□□□□□ -0.42
TUBB1-201ENST00000217133 COL17A1Q9UMD9 1497 aaPredicted RBP12.45□□□□□ -0.42
TUBB1-201ENST00000217133 MLECQ14165 292 aa12.44□□□□□ -0.42
TUBB1-201ENST00000217133 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
TUBB1-201ENST00000217133 SLFN5Q08AF3 891 aa12.44□□□□□ -0.42
TUBB1-201ENST00000217133 BCAR3O75815 825 aa12.43□□□□□ -0.42
TUBB1-201ENST00000217133 APAF1O14727 1248 aa12.42□□□□□ -0.42
TUBB1-201ENST00000217133 EIF3AQ14152 1382 aaKnown RBP12.41□□□□□ -0.42
TUBB1-201ENST00000217133 YEATS2Q9ULM3 1422 aa12.41□□□□□ -0.42
TUBB1-201ENST00000217133 MAPK8IP3Q9UPT6 1336 aa12.41□□□□□ -0.42
TUBB1-201ENST00000217133 GPRASP1Q5JY77 1395 aa12.4□□□□□ -0.42
TUBB1-201ENST00000217133 POGZQ7Z3K3 1410 aa12.4□□□□□ -0.42
TUBB1-201ENST00000217133 IGHDP01880 384 aa12.4□□□□□ -0.42
TUBB1-201ENST00000217133 ARHGEF5Q12774 1597 aa12.4□□□□□ -0.42
TUBB1-201ENST00000217133 CGNL1Q0VF96 1302 aa12.4□□□□□ -0.42
TUBB1-201ENST00000217133 SHANK2Q9UPX8 1470 aa12.4□□□□□ -0.42
TUBB1-201ENST00000217133 CDCA8Q53HL2 280 aa12.39□□□□□ -0.43
TUBB1-201ENST00000217133 ZNF518AQ6AHZ1 1483 aa12.39□□□□□ -0.43
TUBB1-201ENST00000217133 E9PSI1 815 aa12.39□□□□□ -0.43
TUBB1-201ENST00000217133 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
TUBB1-201ENST00000217133 KDM5DQ9BY66 1539 aa12.39□□□□□ -0.43
TUBB1-201ENST00000217133 CROCC2H7BZ55 1655 aa12.39□□□□□ -0.43
TUBB1-201ENST00000217133 ZNF521Q96K83 1311 aa12.39□□□□□ -0.43
TUBB1-201ENST00000217133 ARAP3Q8WWN8 1544 aa12.39□□□□□ -0.43
TUBB1-201ENST00000217133 PLPPR3Q6T4P5 718 aa12.39□□□□□ -0.43
TUBB1-201ENST00000217133 MAP3K4Q9Y6R4 1608 aa12.38□□□□□ -0.43
TUBB1-201ENST00000217133 SEC24BO95487 1268 aa12.38□□□□□ -0.43
TUBB1-201ENST00000217133 CLUAP1Q96AJ1 413 aa12.38□□□□□ -0.43
TUBB1-201ENST00000217133 NEO1Q92859 1461 aa12.38□□□□□ -0.43
TUBB1-201ENST00000217133 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
TUBB1-201ENST00000217133 PANK1Q8TE04 598 aa12.37□□□□□ -0.43
TUBB1-201ENST00000217133 FAM135AQ9P2D6 1515 aa12.37□□□□□ -0.43
TUBB1-201ENST00000217133 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
TUBB1-201ENST00000217133 NAP1L5Q96NT1 182 aaPredicted RBP12.37□□□□□ -0.43
TUBB1-201ENST00000217133 USP19O94966 1318 aa12.37□□□□□ -0.43
TUBB1-201ENST00000217133 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
TUBB1-201ENST00000217133 A2MP01023 1474 aa12.37□□□□□ -0.43
TUBB1-201ENST00000217133 GLI2P10070 1586 aa12.36□□□□□ -0.43
TUBB1-201ENST00000217133 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
TUBB1-201ENST00000217133 TRPM1Q7Z4N2 1603 aa12.36□□□□□ -0.43
TUBB1-201ENST00000217133 NKTRP30414 1462 aaKnown RBP12.36□□□□□ -0.43
TUBB1-201ENST00000217133 GZF1Q9H116 711 aaPredicted RBP12.36□□□□□ -0.43
TUBB1-201ENST00000217133 RRAGDQ9NQL2 400 aaPredicted RBP12.36□□□□□ -0.43
TUBB1-201ENST00000217133 ATP7AQ04656 1500 aa12.36□□□□□ -0.43
TUBB1-201ENST00000217133 GOLGA6L3A6NEY3 463 aa12.36□□□□□ -0.43
TUBB1-201ENST00000217133 PDE3AQ14432 1141 aa12.36□□□□□ -0.43
TUBB1-201ENST00000217133 ZFYVE16Q7Z3T8 1539 aa12.36□□□□□ -0.43
TUBB1-201ENST00000217133 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
TUBB1-201ENST00000217133 KIF13AQ9H1H9 1805 aa12.35□□□□□ -0.43
TUBB1-201ENST00000217133 PNNQ9H307 717 aaKnown RBP12.34□□□□□ -0.43
TUBB1-201ENST00000217133 SENP3Q9H4L4 574 aaPredicted RBP12.34□□□□□ -0.43
TUBB1-201ENST00000217133 NEUROD2Q15784 382 aa12.34□□□□□ -0.43
TUBB1-201ENST00000217133 TRMT2AQ8IZ69 625 aaKnown RBP12.34□□□□□ -0.43
TUBB1-201ENST00000217133 PMFBP1Q8TBY8 1022 aa12.33□□□□□ -0.44
TUBB1-201ENST00000217133 MAGI2Q86UL8 1455 aa12.33□□□□□ -0.44
TUBB1-201ENST00000217133 RTEL1-TNFRSF6BF6WH68 1400 aa12.33□□□□□ -0.44
TUBB1-201ENST00000217133 PRDM15P57071 1507 aaPredicted RBP12.33□□□□□ -0.44
TUBB1-201ENST00000217133 PPRC1Q5VV67 1664 aaKnown RBP12.32□□□□□ -0.44
TUBB1-201ENST00000217133 TBC1D2Q9BYX2 928 aa12.32□□□□□ -0.44
TUBB1-201ENST00000217133 PLA2R1Q13018 1463 aa12.31□□□□□ -0.44
TUBB1-201ENST00000217133 DUOX2Q9NRD8 1548 aa12.3□□□□□ -0.44
TUBB1-201ENST00000217133 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
TUBB1-201ENST00000217133 DMRT2Q9Y5R5 561 aa12.3□□□□□ -0.44
TUBB1-201ENST00000217133 MLH3Q9UHC1 1453 aa12.3□□□□□ -0.44
TUBB1-201ENST00000217133 XRCC6P12956 609 aaKnown RBP eCLIP12.3□□□□□ -0.44
TUBB1-201ENST00000217133 NGEFQ8N5V2 710 aa12.3□□□□□ -0.44
TUBB1-201ENST00000217133 PIK3C2GO75747 1445 aa12.3□□□□□ -0.44
TUBB1-201ENST00000217133 TBC1D32Q96NH3 1257 aa12.3□□□□□ -0.44
TUBB1-201ENST00000217133 PDZRN3Q9UPQ7 1066 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms