RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NPC1L1Q9UHC9 1359 aa17.57■□□□□ 0.4
SRP54-201ENST00000216774 AMER1Q5JTC6 1135 aaPredicted RBP17.57■□□□□ 0.4
SRP54-201ENST00000216774 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
SRP54-201ENST00000216774 KIAA1210Q9ULL0 1709 aa17.57■□□□□ 0.4
SRP54-201ENST00000216774 PPP2R1AP30153 589 aa17.56■□□□□ 0.4
SRP54-201ENST00000216774 ASXL1Q8IXJ9 1541 aa17.56■□□□□ 0.4
SRP54-201ENST00000216774 EIF3AQ14152 1382 aaKnown RBP17.56■□□□□ 0.4
SRP54-201ENST00000216774 PIK3C2GO75747 1445 aa17.56■□□□□ 0.4
SRP54-201ENST00000216774 VWDEQ8N2E2 1590 aa17.55■□□□□ 0.4
SRP54-201ENST00000216774 PDE4AP27815 886 aa17.55■□□□□ 0.4
SRP54-201ENST00000216774 BACH2Q9BYV9 841 aa17.55■□□□□ 0.4
SRP54-201ENST00000216774 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
SRP54-201ENST00000216774 KANK1Q14678 1352 aa17.53■□□□□ 0.4
SRP54-201ENST00000216774 MYOM1P52179 1685 aa17.53■□□□□ 0.4
SRP54-201ENST00000216774 INO80Q9ULG1 1556 aaPredicted RBP17.53■□□□□ 0.4
SRP54-201ENST00000216774 PLIN1O60240 522 aa17.52■□□□□ 0.4
SRP54-201ENST00000216774 SLC24A1O60721 1099 aa17.52■□□□□ 0.4
SRP54-201ENST00000216774 DEKP35659 375 aaKnown RBP17.52■□□□□ 0.4
SRP54-201ENST00000216774 CRBNQ96SW2 442 aa17.52■□□□□ 0.4
SRP54-201ENST00000216774 ZNF521Q96K83 1311 aa17.52■□□□□ 0.4
SRP54-201ENST00000216774 ATP7AQ04656 1500 aa17.51■□□□□ 0.39
SRP54-201ENST00000216774 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
SRP54-201ENST00000216774 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
SRP54-201ENST00000216774 KDM5AP29375 1690 aaKnown RBP17.5■□□□□ 0.39
SRP54-201ENST00000216774 NBR1Q14596 966 aa17.5■□□□□ 0.39
SRP54-201ENST00000216774 ABCA9Q8IUA7 1624 aa17.5■□□□□ 0.39
SRP54-201ENST00000216774 MYOM2P54296 1465 aa17.49■□□□□ 0.39
SRP54-201ENST00000216774 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
SRP54-201ENST00000216774 GOLGA2Q08379 1002 aa17.47■□□□□ 0.39
SRP54-201ENST00000216774 MAP3K4Q9Y6R4 1608 aa17.47■□□□□ 0.39
SRP54-201ENST00000216774 FANCAO15360 1455 aa17.46■□□□□ 0.39
SRP54-201ENST00000216774 KDM2BQ8NHM5 1336 aa17.46■□□□□ 0.39
SRP54-201ENST00000216774 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
SRP54-201ENST00000216774 RTL5Q5HYW3 569 aaPredicted RBP17.45■□□□□ 0.38
SRP54-201ENST00000216774 MROH1Q8NDA8 1641 aa17.44■□□□□ 0.38
SRP54-201ENST00000216774 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
SRP54-201ENST00000216774 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
SRP54-201ENST00000216774 CENPQQ7L2Z9 268 aaPredicted RBP17.44■□□□□ 0.38
SRP54-201ENST00000216774 ABCA6Q8N139 1617 aa17.44■□□□□ 0.38
SRP54-201ENST00000216774 ERVK-7P63135 1459 aa17.43■□□□□ 0.38
SRP54-201ENST00000216774 SLFN5Q08AF3 891 aa17.43■□□□□ 0.38
SRP54-201ENST00000216774 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
SRP54-201ENST00000216774 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
SRP54-201ENST00000216774 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
SRP54-201ENST00000216774 IFT172Q9UG01 1749 aa17.41■□□□□ 0.38
SRP54-201ENST00000216774 KIF3BO15066 747 aa17.41■□□□□ 0.38
SRP54-201ENST00000216774 ADGRL1O94910 1474 aa17.41■□□□□ 0.38
SRP54-201ENST00000216774 NRXN1Q9ULB1 1477 aa17.41■□□□□ 0.38
SRP54-201ENST00000216774 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
SRP54-201ENST00000216774 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
SRP54-201ENST00000216774 KIF1BO60333 1816 aa17.41■□□□□ 0.38
SRP54-201ENST00000216774 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
SRP54-201ENST00000216774 LMTK2Q8IWU2 1503 aa17.39■□□□□ 0.37
SRP54-201ENST00000216774 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
SRP54-201ENST00000216774 CFAP70Q5T0N1 1121 aa17.38■□□□□ 0.37
SRP54-201ENST00000216774 USP35Q9P2H5 1018 aa17.38■□□□□ 0.37
SRP54-201ENST00000216774 UGGT1Q9NYU2 1555 aa17.38■□□□□ 0.37
SRP54-201ENST00000216774 ADGRF5Q8IZF2 1346 aa17.37■□□□□ 0.37
SRP54-201ENST00000216774 SETBP1Q9Y6X0 1596 aa17.36■□□□□ 0.37
SRP54-201ENST00000216774 E9PSI1 815 aa17.36■□□□□ 0.37
SRP54-201ENST00000216774 PPRC1Q5VV67 1664 aaKnown RBP17.35■□□□□ 0.37
SRP54-201ENST00000216774 MROH2AA6NES4 1674 aa17.35■□□□□ 0.37
SRP54-201ENST00000216774 APAF1O14727 1248 aa17.35■□□□□ 0.37
SRP54-201ENST00000216774 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
SRP54-201ENST00000216774 PPM1GO15355 546 aaPredicted RBP17.34■□□□□ 0.37
SRP54-201ENST00000216774 CARD14Q9BXL6 1004 aa17.34■□□□□ 0.37
SRP54-201ENST00000216774 DNAJC5Q9H3Z4 198 aa17.34■□□□□ 0.37
SRP54-201ENST00000216774 ADGRB3O60242 1522 aa17.34■□□□□ 0.37
SRP54-201ENST00000216774 POLR3AO14802 1390 aaPredicted RBP17.34■□□□□ 0.37
SRP54-201ENST00000216774 KIDINS220Q9ULH0 1771 aa17.33■□□□□ 0.36
SRP54-201ENST00000216774 SKAP1Q86WV1 359 aa17.33■□□□□ 0.36
SRP54-201ENST00000216774 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
SRP54-201ENST00000216774 NINLQ9Y2I6 1382 aa17.31■□□□□ 0.36
SRP54-201ENST00000216774 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
SRP54-201ENST00000216774 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
SRP54-201ENST00000216774 CENPJQ9HC77 1338 aaPredicted RBP17.3■□□□□ 0.36
SRP54-201ENST00000216774 ASXL2Q76L83 1435 aa17.29■□□□□ 0.36
SRP54-201ENST00000216774 NOS1P29475 1434 aa17.28■□□□□ 0.36
SRP54-201ENST00000216774 NEFMP07197 916 aa17.28■□□□□ 0.36
SRP54-201ENST00000216774 ZC3H13Q5T200 1668 aaKnown RBP17.28■□□□□ 0.36
SRP54-201ENST00000216774 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
SRP54-201ENST00000216774 C8orf34Q49A92 452 aa17.27■□□□□ 0.36
SRP54-201ENST00000216774 USP32Q8NFA0 1604 aa17.27■□□□□ 0.35
SRP54-201ENST00000216774 PDE3AQ14432 1141 aa17.27■□□□□ 0.35
SRP54-201ENST00000216774 PPLO60437 1756 aa17.26■□□□□ 0.35
SRP54-201ENST00000216774 CGNL1Q0VF96 1302 aa17.26■□□□□ 0.35
SRP54-201ENST00000216774 BCAR3O75815 825 aa17.26■□□□□ 0.35
SRP54-201ENST00000216774 ADGRB1O14514 1584 aa17.25■□□□□ 0.35
SRP54-201ENST00000216774 SHPRHQ149N8 1683 aa17.25■□□□□ 0.35
SRP54-201ENST00000216774 QRICH2Q9H0J4 1663 aa17.25■□□□□ 0.35
SRP54-201ENST00000216774 NSD3Q9BZ95 1437 aa17.25■□□□□ 0.35
SRP54-201ENST00000216774 WWC1Q8IX03 1113 aa17.24■□□□□ 0.35
SRP54-201ENST00000216774 C14orf93Q9H972 538 aaKnown RBP17.24■□□□□ 0.35
SRP54-201ENST00000216774 CFAP74Q9C0B2 1584 aa17.24■□□□□ 0.35
SRP54-201ENST00000216774 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
SRP54-201ENST00000216774 NPATQ14207 1427 aa17.23■□□□□ 0.35
SRP54-201ENST00000216774 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
SRP54-201ENST00000216774 MORC1Q86VD1 984 aa17.23■□□□□ 0.35
SRP54-201ENST00000216774 IQSEC2Q5JU85 1478 aa17.22■□□□□ 0.35
SRP54-201ENST00000216774 MLH3Q9UHC1 1453 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms