RNA–Protein interactions for RNA: ENST00000205636.3

CMTM6-201, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM6, Length 3,863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-201ENST00000205636 ZBTB22O15209 634 aa18.25■□□□□ 0.51
CMTM6-201ENST00000205636 TIAM1Q13009 1591 aa18.25■□□□□ 0.51
CMTM6-201ENST00000205636 DHX29Q7Z478 1369 aaKnown RBP18.25■□□□□ 0.51
CMTM6-201ENST00000205636 CHRM1P11229 460 aaPredicted RBP18.24■□□□□ 0.51
CMTM6-201ENST00000205636 HS1BP3Q53T59 392 aa18.24■□□□□ 0.51
CMTM6-201ENST00000205636 PLCD4Q9BRC7 762 aa18.24■□□□□ 0.51
CMTM6-201ENST00000205636 CAVIN1Q6NZI2 390 aaKnown RBP18.24■□□□□ 0.51
CMTM6-201ENST00000205636 KIF3AQ9Y496 699 aa18.24■□□□□ 0.51
CMTM6-201ENST00000205636 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
CMTM6-201ENST00000205636 ZNF500O60304 480 aaPredicted RBP18.23■□□□□ 0.51
CMTM6-201ENST00000205636 PMFBP1Q8TBY8 1022 aa18.23■□□□□ 0.51
CMTM6-201ENST00000205636 CGNL1Q0VF96 1302 aa18.22■□□□□ 0.51
CMTM6-201ENST00000205636 TSC1Q92574 1164 aa18.22■□□□□ 0.51
CMTM6-201ENST00000205636 DNAJC2Q99543 621 aaKnown RBP18.22■□□□□ 0.51
CMTM6-201ENST00000205636 MCM5P33992 734 aa18.21■□□□□ 0.51
CMTM6-201ENST00000205636 OS9Q13438 667 aaPredicted RBP18.21■□□□□ 0.51
CMTM6-201ENST00000205636 KDM2AQ9Y2K7 1162 aa18.21■□□□□ 0.51
CMTM6-201ENST00000205636 NBPF1Q3BBV0 1214 aa18.21■□□□□ 0.51
CMTM6-201ENST00000205636 HFM1A2PYH4 1435 aa18.21■□□□□ 0.51
CMTM6-201ENST00000205636 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
CMTM6-201ENST00000205636 IGHDP01880 384 aa18.21■□□□□ 0.5
CMTM6-201ENST00000205636 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
CMTM6-201ENST00000205636 CLUAP1Q96AJ1 413 aa18.2■□□□□ 0.5
CMTM6-201ENST00000205636 PANK3Q9H999 370 aa18.19■□□□□ 0.5
CMTM6-201ENST00000205636 FAM177BA6PVY3 158 aa18.18■□□□□ 0.5
CMTM6-201ENST00000205636 PLCB2Q00722 1185 aa18.18■□□□□ 0.5
CMTM6-201ENST00000205636 RNF214Q8ND24 703 aa18.18■□□□□ 0.5
CMTM6-201ENST00000205636 CIZ1Q9ULV3 898 aaPredicted RBP18.18■□□□□ 0.5
CMTM6-201ENST00000205636 MPNDQ8N594 471 aa18.17■□□□□ 0.5
CMTM6-201ENST00000205636 RWDD1Q9H446 243 aaPredicted RBP18.17■□□□□ 0.5
CMTM6-201ENST00000205636 PRXQ9BXM0 1461 aa18.17■□□□□ 0.5
CMTM6-201ENST00000205636 MCTP1Q6DN14 999 aa18.17■□□□□ 0.5
CMTM6-201ENST00000205636 MYRIPQ8NFW9 859 aa18.16■□□□□ 0.5
CMTM6-201ENST00000205636 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
CMTM6-201ENST00000205636 PRIMPOLQ96LW4 560 aa18.15■□□□□ 0.5
CMTM6-201ENST00000205636 TICAM2Q86XR7 235 aa18.15■□□□□ 0.5
CMTM6-201ENST00000205636 TIGD1Q96MW7 591 aa18.15■□□□□ 0.5
CMTM6-201ENST00000205636 PDZRN3Q9UPQ7 1066 aa18.15■□□□□ 0.5
CMTM6-201ENST00000205636 ZNF622Q969S3 477 aaKnown RBP eCLIP18.14■□□□□ 0.49
CMTM6-201ENST00000205636 FAM43BQ6ZT52 329 aaPredicted RBP18.14■□□□□ 0.49
CMTM6-201ENST00000205636 BCAR3O75815 825 aa18.13■□□□□ 0.49
CMTM6-201ENST00000205636 PANK1Q8TE04 598 aa18.13■□□□□ 0.49
CMTM6-201ENST00000205636 TRERF1Q96PN7 1200 aa18.13■□□□□ 0.49
CMTM6-201ENST00000205636 ERICH4A6NGS2 130 aa18.12■□□□□ 0.49
CMTM6-201ENST00000205636 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.49
CMTM6-201ENST00000205636 NAIPQ13075 1403 aa18.12■□□□□ 0.49
CMTM6-201ENST00000205636 EIF3AQ14152 1382 aaKnown RBP18.12■□□□□ 0.49
CMTM6-201ENST00000205636 ST20-MTHFSA0A0A6YYL1 179 aa18.12■□□□□ 0.49
CMTM6-201ENST00000205636 KLHL40Q2TBA0 621 aa18.12■□□□□ 0.49
CMTM6-201ENST00000205636 DIAPH3Q9NSV4 1193 aa18.12■□□□□ 0.49
CMTM6-201ENST00000205636 ATP2B3Q16720 1220 aa18.12■□□□□ 0.49
CMTM6-201ENST00000205636 TRIM6-TRIM34B2RNG4 842 aa18.11■□□□□ 0.49
CMTM6-201ENST00000205636 TRIM34Q9BYJ4 488 aa18.11■□□□□ 0.49
CMTM6-201ENST00000205636 U2AF2P26368 475 aaKnown RBP eCLIP18.1■□□□□ 0.49
CMTM6-201ENST00000205636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.1■□□□□ 0.49
CMTM6-201ENST00000205636 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
CMTM6-201ENST00000205636 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
CMTM6-201ENST00000205636 SSFA2P28290 1259 aa18.09■□□□□ 0.49
CMTM6-201ENST00000205636 JARID2Q92833 1246 aaPredicted RBP18.09■□□□□ 0.49
CMTM6-201ENST00000205636 CHMP4CQ96CF2 233 aa18.08■□□□□ 0.49
CMTM6-201ENST00000205636 DUSP27Q5VZP5 1158 aa18.08■□□□□ 0.48
CMTM6-201ENST00000205636 CALCOCO1Q9P1Z2 691 aa18.07■□□□□ 0.48
CMTM6-201ENST00000205636 IRX5P78411 483 aaPredicted RBP18.07■□□□□ 0.48
CMTM6-201ENST00000205636 AXDND1Q5T1B0 1012 aaPredicted RBP18.07■□□□□ 0.48
CMTM6-201ENST00000205636 ZBTB9Q96C00 473 aa18.07■□□□□ 0.48
CMTM6-201ENST00000205636 RBSNQ9H1K0 784 aa18.07■□□□□ 0.48
CMTM6-201ENST00000205636 RAB3GAP1Q15042 981 aa18.06■□□□□ 0.48
CMTM6-201ENST00000205636 ZSCAN23Q3MJ62 389 aa18.06■□□□□ 0.48
CMTM6-201ENST00000205636 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
CMTM6-201ENST00000205636 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
CMTM6-201ENST00000205636 RBM25P49756 843 aaKnown RBP18.04■□□□□ 0.48
CMTM6-201ENST00000205636 TSPYL1Q9H0U9 437 aa18.04■□□□□ 0.48
CMTM6-201ENST00000205636 PRPF40AO75400 957 aaKnown RBP18.04■□□□□ 0.48
CMTM6-201ENST00000205636 CLSTN1O94985 981 aa18.03■□□□□ 0.48
CMTM6-201ENST00000205636 PDE3AQ14432 1141 aa18.03■□□□□ 0.48
CMTM6-201ENST00000205636 PTPN23Q9H3S7 1636 aa18.03■□□□□ 0.48
CMTM6-201ENST00000205636 BAG4O95429 457 aaKnown RBP18.03■□□□□ 0.48
CMTM6-201ENST00000205636 BCL2L12Q9HB09 334 aa18.03■□□□□ 0.48
CMTM6-201ENST00000205636 NOLC1Q14978 699 aaKnown RBP eCLIP18.02■□□□□ 0.48
CMTM6-201ENST00000205636 SYCE3A1L190 88 aa18.02■□□□□ 0.47
CMTM6-201ENST00000205636 FEZ1Q99689 392 aa18.01■□□□□ 0.47
CMTM6-201ENST00000205636 NGEFQ8N5V2 710 aa18.01■□□□□ 0.47
CMTM6-201ENST00000205636 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.01■□□□□ 0.47
CMTM6-201ENST00000205636 PSMD1Q99460 953 aa18■□□□□ 0.47
CMTM6-201ENST00000205636 OGFRQ9NZT2 677 aa18■□□□□ 0.47
CMTM6-201ENST00000205636 MYOM3Q5VTT5 1437 aa18■□□□□ 0.47
CMTM6-201ENST00000205636 NUCB2P80303 420 aa18■□□□□ 0.47
CMTM6-201ENST00000205636 NEUROD2Q15784 382 aa18■□□□□ 0.47
CMTM6-201ENST00000205636 SMC5Q8IY18 1101 aa18■□□□□ 0.47
CMTM6-201ENST00000205636 ZNF445P59923 1031 aa17.99■□□□□ 0.47
CMTM6-201ENST00000205636 GABPB1Q06547 395 aaPredicted RBP17.99■□□□□ 0.47
CMTM6-201ENST00000205636 FOXD4L5Q5VV16 416 aaPredicted RBP17.99■□□□□ 0.47
CMTM6-201ENST00000205636 FOXD4L4Q8WXT5 416 aaPredicted RBP17.99■□□□□ 0.47
CMTM6-201ENST00000205636 SYAP1Q96A49 352 aaPredicted RBP17.99■□□□□ 0.47
CMTM6-201ENST00000205636 PTPRKQ15262 1439 aa17.99■□□□□ 0.47
CMTM6-201ENST00000205636 K7ELQ4 463 aaPredicted RBP17.99■□□□□ 0.47
CMTM6-201ENST00000205636 RBM27Q9P2N5 1060 aaKnown RBP17.98■□□□□ 0.47
CMTM6-201ENST00000205636 KDM5BQ9UGL1 1544 aa17.98■□□□□ 0.47
CMTM6-201ENST00000205636 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
CMTM6-201ENST00000205636 KNSTRNQ9Y448 316 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms