RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Rims1Q99NE5 1463 aa21.75■■□□□ 1.07
Ubp1-206ENSMUST00000216558 Nop58Q6DFW4 536 aaKnown RBP21.75■■□□□ 1.07
Ubp1-206ENSMUST00000216558 Myom2Q14BI5 1463 aa21.74■■□□□ 1.07
Ubp1-206ENSMUST00000216558 Stk24Q99KH8 431 aa21.74■■□□□ 1.07
Ubp1-206ENSMUST00000216558 Hfm1D3Z4R1 1434 aa21.7■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Mroh1E0CZ22 1640 aa21.69■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Skint5A7XUY5 1461 aa21.68■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Smg6P61406 1418 aaKnown RBP21.68■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Arhgap23Q69ZH9 1483 aa21.67■■□□□ 1.06
Ubp1-206ENSMUST00000216558 CltcQ68FD5 1675 aaKnown RBP21.67■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Afap1Q80YS6 731 aa21.66■■□□□ 1.06
Ubp1-206ENSMUST00000216558 RictorQ6QI06 1708 aa21.66■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Plxnc1Q9QZC2 1574 aa21.66■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Myo3aQ8K3H5 1613 aa21.65■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Ahdc1Q6PAL7 1594 aaKnown RBP21.64■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Cdk5rap2Q8K389 1822 aa21.64■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Kdm2aP59997 1161 aa21.62■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Adamtsl3G3UXC7 1706 aa21.61■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Pola1P33609 1465 aa21.61■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Dnajc5P60904 198 aa21.59■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Stard8Q8K031 1019 aa21.59■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Gm20521D3Z5F7 333 aa21.58■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Sipa1l1Q8C0T5 1782 aa21.58■■□□□ 1.05
Ubp1-206ENSMUST00000216558 AU022751B1B0V2 589 aa21.58■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Srpk2O54781 681 aaKnown RBP21.58■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Myom1Q62234 1667 aaKnown RBP21.57■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Srcin1Q9QWI6 1250 aa21.57■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Tubgcp6G5E8P0 1769 aa21.57■■□□□ 1.04
Ubp1-206ENSMUST00000216558 DnmbpQ6TXD4 1580 aa21.56■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Dnajc5gQ8C632 165 aa21.55■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Nphp4P59240 1425 aa21.55■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Gm13695A2AK44 830 aa21.55■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Itsn1Q9Z0R4 1714 aa21.53■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Kif13aQ9EQW7 1749 aa21.53■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Fan1Q69ZT1 1020 aa21.52■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Slc52a2Q9D8F3 450 aa21.52■■□□□ 1.04
Ubp1-206ENSMUST00000216558 PtprmP28828 1452 aa21.52■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Prrc2bQ7TPM1 1486 aaKnown RBP21.52■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Itsn2Q9Z0R6 1659 aa21.52■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Os9Q8K2C7 672 aa21.51■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Med14A2ABV5 1459 aaKnown RBP21.51■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Sbno1Q689Z5 1390 aa21.49■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Puf60Q3UEB3 564 aaKnown RBP21.48■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Usp40Q8BWR4 1235 aa21.48■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Gtf2e1Q9D0D5 440 aa21.47■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Naip7Q9JIB3 1402 aa21.47■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Kdm5aQ3UXZ9 1690 aa21.46■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Ift172Q6VH22 1749 aa21.45■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Ercc6l2Q9JIM3 1537 aa21.44■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Zbtb4Q5F293 982 aa21.43■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Arid4bA2CG63 1314 aaKnown RBP21.43■■□□□ 1.02
Ubp1-206ENSMUST00000216558 PalldQ9ET54 1408 aa21.43■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Lrrc7Q80TE7 1490 aa21.43■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Zc3h13E9Q784 1729 aaKnown RBP21.42■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Stra8P70278 393 aa21.41■■□□□ 1.02
Ubp1-206ENSMUST00000216558 PrxO55103 1391 aa21.4■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Pcdh10E9PXQ7 1057 aa21.4■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Slc24a1Q91WD8 1130 aa21.4■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Arhgef28P97433 1693 aa21.39■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Chd2E9PZM4 1827 aaKnown RBP21.38■■□□□ 1.01
Ubp1-206ENSMUST00000216558 MaddQ80U28 1577 aa21.37■■□□□ 1.01
Ubp1-206ENSMUST00000216558 PplQ9R269 1755 aa21.36■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Pank3Q8R2W9 370 aa21.36■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Eif2ak4Q9QZ05 1648 aa21.36■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Tmf1B9EKI3 1091 aa21.35■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Exoc6Q8R313 802 aa21.34■■□□□ 1.01
Ubp1-206ENSMUST00000216558 PnisrA2AJT4 805 aaKnown RBP21.33■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Wwc2Q6NXJ0 1187 aa21.33■■□□□ 1.01
Ubp1-206ENSMUST00000216558 IqubQ8CDK3 788 aa21.33■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Gemin5Q8BX17 1502 aaKnown RBP21.33■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Safb2Q80YR5 991 aaKnown RBP21.33■■□□□ 1
Ubp1-206ENSMUST00000216558 Anks4bQ8K3X6 423 aa21.33■■□□□ 1
Ubp1-206ENSMUST00000216558 Gm16486A0A1D5RMD1 1434 aa21.32■■□□□ 1
Ubp1-206ENSMUST00000216558 Shq1Q7TMX5 569 aa21.31■■□□□ 1
Ubp1-206ENSMUST00000216558 Dip2bQ3UH60 1574 aa21.3■■□□□ 1
Ubp1-206ENSMUST00000216558 Stag3O70576 1240 aa21.3■■□□□ 1
Ubp1-206ENSMUST00000216558 Mrs2Q5NCE8 434 aa21.3■■□□□ 1
Ubp1-206ENSMUST00000216558 Slc4a1apE9PX68 744 aa21.29■■□□□ 1
Ubp1-206ENSMUST00000216558 Fam184bQ0KK56 942 aa21.29■■□□□ 1
Ubp1-206ENSMUST00000216558 Plppr3Q7TPB0 716 aa21.29■■□□□ 1
Ubp1-206ENSMUST00000216558 Inpp5dQ9ES52 1191 aa21.29■■□□□ 1
Ubp1-206ENSMUST00000216558 Zscan10Q3URR7 782 aa21.29■■□□□ 1
Ubp1-206ENSMUST00000216558 Dip2aQ8BWT5 1523 aa21.27■■□□□ 1
Ubp1-206ENSMUST00000216558 Slc4a2P13808 1237 aaKnown RBP21.27■■□□□ 1
Ubp1-206ENSMUST00000216558 InsrP15208 1372 aa21.27■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Atp1b4Q99ME6 356 aa21.26■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Plekhg1F6S200 1446 aa21.25■□□□□ 0.99
Ubp1-206ENSMUST00000216558 CenpjQ569L8 1344 aa21.25■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Q9D9H8 365 aa21.24■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Anp32bQ9EST5 272 aaKnown RBP21.22■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Bcl9Q9D219 1425 aa21.22■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Cep170bQ80U49 1574 aa21.21■□□□□ 0.99
Ubp1-206ENSMUST00000216558 NrdcQ8BHG1 1161 aa21.2■□□□□ 0.98
Ubp1-206ENSMUST00000216558 P3h3Q8CG70 732 aa21.2■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Txndc2Q6P902 515 aa21.19■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Stk26Q99JT2 416 aa21.19■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Psme1P97371 249 aa21.18■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Znf710Q3U288 666 aa21.18■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Slit3Q9WVB4 1523 aa21.18■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Gprasp1Q5U4C1 1347 aa21.16■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 90.7 ms