RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Rims1Q99NE5 1463 aa21.75■■□□□ 1.07
Ubp1-206ENSMUST00000216558 Nop58Q6DFW4 536 aaKnown RBP21.75■■□□□ 1.07
Ubp1-206ENSMUST00000216558 Myom2Q14BI5 1463 aa21.74■■□□□ 1.07
Ubp1-206ENSMUST00000216558 Stk24Q99KH8 431 aa21.74■■□□□ 1.07
Ubp1-206ENSMUST00000216558 Hfm1D3Z4R1 1434 aa21.7■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Mroh1E0CZ22 1640 aa21.69■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Skint5A7XUY5 1461 aa21.68■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Smg6P61406 1418 aaKnown RBP21.68■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Arhgap23Q69ZH9 1483 aa21.67■■□□□ 1.06
Ubp1-206ENSMUST00000216558 CltcQ68FD5 1675 aaKnown RBP21.67■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Afap1Q80YS6 731 aa21.66■■□□□ 1.06
Ubp1-206ENSMUST00000216558 RictorQ6QI06 1708 aa21.66■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Plxnc1Q9QZC2 1574 aa21.66■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Myo3aQ8K3H5 1613 aa21.65■■□□□ 1.06
Ubp1-206ENSMUST00000216558 Ahdc1Q6PAL7 1594 aaKnown RBP21.64■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Cdk5rap2Q8K389 1822 aa21.64■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Kdm2aP59997 1161 aa21.62■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Adamtsl3G3UXC7 1706 aa21.61■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Pola1P33609 1465 aa21.61■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Dnajc5P60904 198 aa21.59■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Stard8Q8K031 1019 aa21.59■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Gm20521D3Z5F7 333 aa21.58■■□□□ 1.05
Ubp1-206ENSMUST00000216558 Sipa1l1Q8C0T5 1782 aa21.58■■□□□ 1.05
Ubp1-206ENSMUST00000216558 AU022751B1B0V2 589 aa21.58■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Srpk2O54781 681 aaKnown RBP21.58■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Myom1Q62234 1667 aaKnown RBP21.57■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Srcin1Q9QWI6 1250 aa21.57■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Tubgcp6G5E8P0 1769 aa21.57■■□□□ 1.04
Ubp1-206ENSMUST00000216558 DnmbpQ6TXD4 1580 aa21.56■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Dnajc5gQ8C632 165 aa21.55■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Nphp4P59240 1425 aa21.55■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Gm13695A2AK44 830 aa21.55■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Itsn1Q9Z0R4 1714 aa21.53■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Kif13aQ9EQW7 1749 aa21.53■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Fan1Q69ZT1 1020 aa21.52■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Slc52a2Q9D8F3 450 aa21.52■■□□□ 1.04
Ubp1-206ENSMUST00000216558 PtprmP28828 1452 aa21.52■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Prrc2bQ7TPM1 1486 aaKnown RBP21.52■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Itsn2Q9Z0R6 1659 aa21.52■■□□□ 1.04
Ubp1-206ENSMUST00000216558 Os9Q8K2C7 672 aa21.51■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Med14A2ABV5 1459 aaKnown RBP21.51■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Sbno1Q689Z5 1390 aa21.49■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Puf60Q3UEB3 564 aaKnown RBP21.48■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Usp40Q8BWR4 1235 aa21.48■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Gtf2e1Q9D0D5 440 aa21.47■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Naip7Q9JIB3 1402 aa21.47■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Kdm5aQ3UXZ9 1690 aa21.46■■□□□ 1.03
Ubp1-206ENSMUST00000216558 Ift172Q6VH22 1749 aa21.45■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Ercc6l2Q9JIM3 1537 aa21.44■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Zbtb4Q5F293 982 aa21.43■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Arid4bA2CG63 1314 aaKnown RBP21.43■■□□□ 1.02
Ubp1-206ENSMUST00000216558 PalldQ9ET54 1408 aa21.43■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Lrrc7Q80TE7 1490 aa21.43■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Zc3h13E9Q784 1729 aaKnown RBP21.42■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Stra8P70278 393 aa21.41■■□□□ 1.02
Ubp1-206ENSMUST00000216558 PrxO55103 1391 aa21.4■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Pcdh10E9PXQ7 1057 aa21.4■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Slc24a1Q91WD8 1130 aa21.4■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Arhgef28P97433 1693 aa21.39■■□□□ 1.02
Ubp1-206ENSMUST00000216558 Chd2E9PZM4 1827 aaKnown RBP21.38■■□□□ 1.01
Ubp1-206ENSMUST00000216558 MaddQ80U28 1577 aa21.37■■□□□ 1.01
Ubp1-206ENSMUST00000216558 PplQ9R269 1755 aa21.36■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Pank3Q8R2W9 370 aa21.36■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Eif2ak4Q9QZ05 1648 aa21.36■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Tmf1B9EKI3 1091 aa21.35■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Exoc6Q8R313 802 aa21.34■■□□□ 1.01
Ubp1-206ENSMUST00000216558 PnisrA2AJT4 805 aaKnown RBP21.33■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Wwc2Q6NXJ0 1187 aa21.33■■□□□ 1.01
Ubp1-206ENSMUST00000216558 IqubQ8CDK3 788 aa21.33■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Gemin5Q8BX17 1502 aaKnown RBP21.33■■□□□ 1.01
Ubp1-206ENSMUST00000216558 Safb2Q80YR5 991 aaKnown RBP21.33■■□□□ 1
Ubp1-206ENSMUST00000216558 Anks4bQ8K3X6 423 aa21.33■■□□□ 1
Ubp1-206ENSMUST00000216558 Gm16486A0A1D5RMD1 1434 aa21.32■■□□□ 1
Ubp1-206ENSMUST00000216558 Shq1Q7TMX5 569 aa21.31■■□□□ 1
Ubp1-206ENSMUST00000216558 Dip2bQ3UH60 1574 aa21.3■■□□□ 1
Ubp1-206ENSMUST00000216558 Stag3O70576 1240 aa21.3■■□□□ 1
Ubp1-206ENSMUST00000216558 Mrs2Q5NCE8 434 aa21.3■■□□□ 1
Ubp1-206ENSMUST00000216558 Slc4a1apE9PX68 744 aa21.29■■□□□ 1
Ubp1-206ENSMUST00000216558 Fam184bQ0KK56 942 aa21.29■■□□□ 1
Ubp1-206ENSMUST00000216558 Plppr3Q7TPB0 716 aa21.29■■□□□ 1
Ubp1-206ENSMUST00000216558 Inpp5dQ9ES52 1191 aa21.29■■□□□ 1
Ubp1-206ENSMUST00000216558 Zscan10Q3URR7 782 aa21.29■■□□□ 1
Ubp1-206ENSMUST00000216558 Dip2aQ8BWT5 1523 aa21.27■■□□□ 1
Ubp1-206ENSMUST00000216558 Slc4a2P13808 1237 aaKnown RBP21.27■■□□□ 1
Ubp1-206ENSMUST00000216558 InsrP15208 1372 aa21.27■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Atp1b4Q99ME6 356 aa21.26■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Plekhg1F6S200 1446 aa21.25■□□□□ 0.99
Ubp1-206ENSMUST00000216558 CenpjQ569L8 1344 aa21.25■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Q9D9H8 365 aa21.24■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Anp32bQ9EST5 272 aaKnown RBP21.22■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Bcl9Q9D219 1425 aa21.22■□□□□ 0.99
Ubp1-206ENSMUST00000216558 Cep170bQ80U49 1574 aa21.21■□□□□ 0.99
Ubp1-206ENSMUST00000216558 NrdcQ8BHG1 1161 aa21.2■□□□□ 0.98
Ubp1-206ENSMUST00000216558 P3h3Q8CG70 732 aa21.2■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Txndc2Q6P902 515 aa21.19■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Stk26Q99JT2 416 aa21.19■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Psme1P97371 249 aa21.18■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Znf710Q3U288 666 aa21.18■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Slit3Q9WVB4 1523 aa21.18■□□□□ 0.98
Ubp1-206ENSMUST00000216558 Gprasp1Q5U4C1 1347 aa21.16■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms